RNA–Protein interactions for RNA: ENST00000591062.1

NCLN-206, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 460 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-206ENST00000591062 NISCHQ9Y2I1 1504 aa34.9■■■■□ 3.18
NCLN-206ENST00000591062 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
NCLN-206ENST00000591062 ABCC9O60706 1549 aa31.09■■■□□ 2.57
NCLN-206ENST00000591062 RB1CC1Q8TDY2 1594 aa29.75■■■□□ 2.35
NCLN-206ENST00000591062 NACADO15069 1562 aa29.56■■■□□ 2.32
NCLN-206ENST00000591062 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
NCLN-206ENST00000591062 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
NCLN-206ENST00000591062 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
NCLN-206ENST00000591062 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
NCLN-206ENST00000591062 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
NCLN-206ENST00000591062 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
NCLN-206ENST00000591062 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
NCLN-206ENST00000591062 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
NCLN-206ENST00000591062 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
NCLN-206ENST00000591062 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
NCLN-206ENST00000591062 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
NCLN-206ENST00000591062 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
NCLN-206ENST00000591062 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
NCLN-206ENST00000591062 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
NCLN-206ENST00000591062 NCAPD3P42695 1498 aa27.2■■□□□ 1.95
NCLN-206ENST00000591062 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
NCLN-206ENST00000591062 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
NCLN-206ENST00000591062 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
NCLN-206ENST00000591062 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
NCLN-206ENST00000591062 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
NCLN-206ENST00000591062 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
NCLN-206ENST00000591062 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
NCLN-206ENST00000591062 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
NCLN-206ENST00000591062 CUX2O14529 1486 aa26.81■■□□□ 1.88
NCLN-206ENST00000591062 NESP48681 1621 aa26.76■■□□□ 1.87
NCLN-206ENST00000591062 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
NCLN-206ENST00000591062 WIZO95785 1651 aa26.63■■□□□ 1.85
NCLN-206ENST00000591062 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
NCLN-206ENST00000591062 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
NCLN-206ENST00000591062 KIF21AQ7Z4S6 1674 aa26.59■■□□□ 1.85
NCLN-206ENST00000591062 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
NCLN-206ENST00000591062 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
NCLN-206ENST00000591062 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
NCLN-206ENST00000591062 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
NCLN-206ENST00000591062 MRC2Q9UBG0 1479 aa26.24■■□□□ 1.79
NCLN-206ENST00000591062 WDR62O43379 1518 aa26.22■■□□□ 1.79
NCLN-206ENST00000591062 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
NCLN-206ENST00000591062 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
NCLN-206ENST00000591062 CFTRP13569 1480 aa26.13■■□□□ 1.77
NCLN-206ENST00000591062 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
NCLN-206ENST00000591062 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
NCLN-206ENST00000591062 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
NCLN-206ENST00000591062 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
NCLN-206ENST00000591062 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
NCLN-206ENST00000591062 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
NCLN-206ENST00000591062 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
NCLN-206ENST00000591062 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
NCLN-206ENST00000591062 ZNF608Q9ULD9 1512 aaPredicted RBP25.54■■□□□ 1.68
NCLN-206ENST00000591062 EIF4G3O43432 1585 aaKnown RBP25.53■■□□□ 1.68
NCLN-206ENST00000591062 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
NCLN-206ENST00000591062 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
NCLN-206ENST00000591062 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
NCLN-206ENST00000591062 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
NCLN-206ENST00000591062 CHD1O14646 1710 aa25.37■■□□□ 1.65
NCLN-206ENST00000591062 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
NCLN-206ENST00000591062 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
NCLN-206ENST00000591062 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
NCLN-206ENST00000591062 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
NCLN-206ENST00000591062 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
NCLN-206ENST00000591062 CUX1P39880 1505 aa25.27■■□□□ 1.64
NCLN-206ENST00000591062 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
NCLN-206ENST00000591062 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
NCLN-206ENST00000591062 SOGA1O94964 1423 aa25.2■■□□□ 1.63
NCLN-206ENST00000591062 ARHGEF11O15085 1522 aa25.18■■□□□ 1.62
NCLN-206ENST00000591062 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
NCLN-206ENST00000591062 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
NCLN-206ENST00000591062 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
NCLN-206ENST00000591062 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
NCLN-206ENST00000591062 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
NCLN-206ENST00000591062 GRIN2BQ13224 1484 aa25.03■■□□□ 1.6
NCLN-206ENST00000591062 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
NCLN-206ENST00000591062 FBLN2P98095 1184 aa25.01■■□□□ 1.59
NCLN-206ENST00000591062 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
NCLN-206ENST00000591062 SYNJ1O43426 1573 aa25■■□□□ 1.59
NCLN-206ENST00000591062 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
NCLN-206ENST00000591062 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
NCLN-206ENST00000591062 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
NCLN-206ENST00000591062 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
NCLN-206ENST00000591062 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
NCLN-206ENST00000591062 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
NCLN-206ENST00000591062 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
NCLN-206ENST00000591062 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
NCLN-206ENST00000591062 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
NCLN-206ENST00000591062 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
NCLN-206ENST00000591062 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
NCLN-206ENST00000591062 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
NCLN-206ENST00000591062 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
NCLN-206ENST00000591062 NUP160Q12769 1436 aa24.63■■□□□ 1.53
NCLN-206ENST00000591062 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
NCLN-206ENST00000591062 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
NCLN-206ENST00000591062 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.52
NCLN-206ENST00000591062 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
NCLN-206ENST00000591062 IGF1RP08069 1367 aa24.5■■□□□ 1.51
NCLN-206ENST00000591062 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
NCLN-206ENST00000591062 CUL7Q14999 1698 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms