RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
TRIM47-202ENST00000585333 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
TRIM47-202ENST00000585333 ABCC9O60706 1549 aa25.46■■□□□ 1.67
TRIM47-202ENST00000585333 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
TRIM47-202ENST00000585333 DCAF1Q9Y4B6 1507 aa25.13■■□□□ 1.61
TRIM47-202ENST00000585333 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
TRIM47-202ENST00000585333 NACADO15069 1562 aa25■■□□□ 1.59
TRIM47-202ENST00000585333 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
TRIM47-202ENST00000585333 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
TRIM47-202ENST00000585333 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
TRIM47-202ENST00000585333 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
TRIM47-202ENST00000585333 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
TRIM47-202ENST00000585333 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
TRIM47-202ENST00000585333 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRIM47-202ENST00000585333 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
TRIM47-202ENST00000585333 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
TRIM47-202ENST00000585333 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
TRIM47-202ENST00000585333 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
TRIM47-202ENST00000585333 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
TRIM47-202ENST00000585333 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
TRIM47-202ENST00000585333 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
TRIM47-202ENST00000585333 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
TRIM47-202ENST00000585333 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.29
TRIM47-202ENST00000585333 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.29
TRIM47-202ENST00000585333 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
TRIM47-202ENST00000585333 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
TRIM47-202ENST00000585333 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
TRIM47-202ENST00000585333 WIZO95785 1651 aa22.97■■□□□ 1.27
TRIM47-202ENST00000585333 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
TRIM47-202ENST00000585333 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
TRIM47-202ENST00000585333 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
TRIM47-202ENST00000585333 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
TRIM47-202ENST00000585333 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
TRIM47-202ENST00000585333 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
TRIM47-202ENST00000585333 CFTRP13569 1480 aa22.34■■□□□ 1.17
TRIM47-202ENST00000585333 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
TRIM47-202ENST00000585333 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
TRIM47-202ENST00000585333 NESP48681 1621 aa22.13■■□□□ 1.13
TRIM47-202ENST00000585333 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
TRIM47-202ENST00000585333 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
TRIM47-202ENST00000585333 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
TRIM47-202ENST00000585333 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
TRIM47-202ENST00000585333 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
TRIM47-202ENST00000585333 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
TRIM47-202ENST00000585333 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
TRIM47-202ENST00000585333 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
TRIM47-202ENST00000585333 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
TRIM47-202ENST00000585333 WDR62O43379 1518 aa21.79■■□□□ 1.08
TRIM47-202ENST00000585333 BIVM-ERCC5R4GMW8 1640 aa21.78■■□□□ 1.08
TRIM47-202ENST00000585333 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
TRIM47-202ENST00000585333 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
TRIM47-202ENST00000585333 CUX1P39880 1505 aa21.76■■□□□ 1.07
TRIM47-202ENST00000585333 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
TRIM47-202ENST00000585333 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
TRIM47-202ENST00000585333 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
TRIM47-202ENST00000585333 DNAJC5Q9H3Z4 198 aa21.73■■□□□ 1.07
TRIM47-202ENST00000585333 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
TRIM47-202ENST00000585333 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.06
TRIM47-202ENST00000585333 CUX2O14529 1486 aa21.64■■□□□ 1.05
TRIM47-202ENST00000585333 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
TRIM47-202ENST00000585333 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
TRIM47-202ENST00000585333 SOGA1O94964 1423 aa21.57■■□□□ 1.04
TRIM47-202ENST00000585333 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
TRIM47-202ENST00000585333 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
TRIM47-202ENST00000585333 EEA1Q15075 1411 aa21.5■■□□□ 1.03
TRIM47-202ENST00000585333 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
TRIM47-202ENST00000585333 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
TRIM47-202ENST00000585333 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
TRIM47-202ENST00000585333 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
TRIM47-202ENST00000585333 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
TRIM47-202ENST00000585333 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
TRIM47-202ENST00000585333 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
TRIM47-202ENST00000585333 GRIN2BQ13224 1484 aa21.3■■□□□ 1
TRIM47-202ENST00000585333 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
TRIM47-202ENST00000585333 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
TRIM47-202ENST00000585333 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
TRIM47-202ENST00000585333 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRIM47-202ENST00000585333 CUL7Q14999 1698 aa21.23■□□□□ 0.99
TRIM47-202ENST00000585333 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
TRIM47-202ENST00000585333 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
TRIM47-202ENST00000585333 IGF1RP08069 1367 aa21.2■□□□□ 0.98
TRIM47-202ENST00000585333 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
TRIM47-202ENST00000585333 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
TRIM47-202ENST00000585333 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
TRIM47-202ENST00000585333 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.98
TRIM47-202ENST00000585333 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
TRIM47-202ENST00000585333 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
TRIM47-202ENST00000585333 KIF21BO75037 1637 aa21.11■□□□□ 0.97
TRIM47-202ENST00000585333 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
TRIM47-202ENST00000585333 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
TRIM47-202ENST00000585333 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
TRIM47-202ENST00000585333 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
TRIM47-202ENST00000585333 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
TRIM47-202ENST00000585333 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
TRIM47-202ENST00000585333 FBLN2P98095 1184 aa20.95■□□□□ 0.94
TRIM47-202ENST00000585333 UBTFP17480 764 aaKnown RBP20.92■□□□□ 0.94
TRIM47-202ENST00000585333 CHD1O14646 1710 aa20.89■□□□□ 0.93
TRIM47-202ENST00000585333 NUP160Q12769 1436 aa20.87■□□□□ 0.93
TRIM47-202ENST00000585333 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
TRIM47-202ENST00000585333 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms