RNA–Protein interactions for RNA: ENST00000420826.6

SUMO2-202, Transcript of small ubiquitin-like modifier 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO2, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO2-202ENST00000420826 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
SUMO2-202ENST00000420826 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
SUMO2-202ENST00000420826 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
SUMO2-202ENST00000420826 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
SUMO2-202ENST00000420826 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
SUMO2-202ENST00000420826 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
SUMO2-202ENST00000420826 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.21
SUMO2-202ENST00000420826 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.17
SUMO2-202ENST00000420826 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
SUMO2-202ENST00000420826 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
SUMO2-202ENST00000420826 ABCC9O60706 1549 aa15.93■□□□□ 0.14
SUMO2-202ENST00000420826 NACADO15069 1562 aa15.8■□□□□ 0.12
SUMO2-202ENST00000420826 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
SUMO2-202ENST00000420826 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
SUMO2-202ENST00000420826 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
SUMO2-202ENST00000420826 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
SUMO2-202ENST00000420826 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
SUMO2-202ENST00000420826 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
SUMO2-202ENST00000420826 WIZO95785 1651 aa15.49■□□□□ 0.07
SUMO2-202ENST00000420826 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
SUMO2-202ENST00000420826 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
SUMO2-202ENST00000420826 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
SUMO2-202ENST00000420826 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
SUMO2-202ENST00000420826 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
SUMO2-202ENST00000420826 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
SUMO2-202ENST00000420826 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
SUMO2-202ENST00000420826 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
SUMO2-202ENST00000420826 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
SUMO2-202ENST00000420826 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
SUMO2-202ENST00000420826 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
SUMO2-202ENST00000420826 FAM9AQ8IZU1 332 aaPredicted RBP15.1■□□□□ 0.01
SUMO2-202ENST00000420826 ABCC8Q09428 1581 aa15.05■□□□□ 0
SUMO2-202ENST00000420826 HRCP23327 699 aa15.03■□□□□ -0
SUMO2-202ENST00000420826 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
SUMO2-202ENST00000420826 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
SUMO2-202ENST00000420826 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
SUMO2-202ENST00000420826 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
SUMO2-202ENST00000420826 SOGA1O94964 1423 aa14.83□□□□□ -0.04
SUMO2-202ENST00000420826 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
SUMO2-202ENST00000420826 RUSC2Q8N2Y8 1516 aa14.81□□□□□ -0.04
SUMO2-202ENST00000420826 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
SUMO2-202ENST00000420826 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
SUMO2-202ENST00000420826 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.055e-6■■■■■ 29.2
SUMO2-202ENST00000420826 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
SUMO2-202ENST00000420826 CEP162Q5TB80 1403 aa14.64□□□□□ -0.07
SUMO2-202ENST00000420826 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
SUMO2-202ENST00000420826 EEA1Q15075 1411 aa14.63□□□□□ -0.07
SUMO2-202ENST00000420826 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
SUMO2-202ENST00000420826 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
SUMO2-202ENST00000420826 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
SUMO2-202ENST00000420826 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
SUMO2-202ENST00000420826 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
SUMO2-202ENST00000420826 KIF21BO75037 1637 aa14.57□□□□□ -0.08
SUMO2-202ENST00000420826 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
SUMO2-202ENST00000420826 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
SUMO2-202ENST00000420826 CUX1P39880 1505 aa14.49□□□□□ -0.09
SUMO2-202ENST00000420826 UBTFP17480 764 aaKnown RBP14.48□□□□□ -0.09
SUMO2-202ENST00000420826 RAPGEF2Q9Y4G8 1499 aa14.48□□□□□ -0.09
SUMO2-202ENST00000420826 PRDM2Q13029 1718 aa14.46□□□□□ -0.09
SUMO2-202ENST00000420826 CFTRP13569 1480 aa14.46□□□□□ -0.1
SUMO2-202ENST00000420826 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
SUMO2-202ENST00000420826 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
SUMO2-202ENST00000420826 ZEB1P37275 1124 aaPredicted RBP14.38□□□□□ -0.11
SUMO2-202ENST00000420826 CLIP1P30622 1438 aa14.38□□□□□ -0.11
SUMO2-202ENST00000420826 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
SUMO2-202ENST00000420826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
SUMO2-202ENST00000420826 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.11
SUMO2-202ENST00000420826 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
SUMO2-202ENST00000420826 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
SUMO2-202ENST00000420826 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.12
SUMO2-202ENST00000420826 ARAP1Q96P48 1450 aa14.27□□□□□ -0.13
SUMO2-202ENST00000420826 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
SUMO2-202ENST00000420826 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
SUMO2-202ENST00000420826 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
SUMO2-202ENST00000420826 CUX2O14529 1486 aa14.19□□□□□ -0.14
SUMO2-202ENST00000420826 NESP48681 1621 aa14.19□□□□□ -0.14
SUMO2-202ENST00000420826 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
SUMO2-202ENST00000420826 IGF1RP08069 1367 aa14.16□□□□□ -0.14
SUMO2-202ENST00000420826 ARHGAP35Q9NRY4 1499 aa14.15□□□□□ -0.14
SUMO2-202ENST00000420826 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
SUMO2-202ENST00000420826 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
SUMO2-202ENST00000420826 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
SUMO2-202ENST00000420826 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
SUMO2-202ENST00000420826 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
SUMO2-202ENST00000420826 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
SUMO2-202ENST00000420826 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.15
SUMO2-202ENST00000420826 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
SUMO2-202ENST00000420826 WDR97A6NE52 1622 aa14.06□□□□□ -0.16
SUMO2-202ENST00000420826 CARMIL1Q5VZK9 1371 aa14.06□□□□□ -0.16
SUMO2-202ENST00000420826 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
SUMO2-202ENST00000420826 APLP2Q06481 763 aa14.04□□□□□ -0.16
SUMO2-202ENST00000420826 URB2Q14146 1524 aaKnown RBP14.04□□□□□ -0.16
SUMO2-202ENST00000420826 LAMC3Q9Y6N6 1575 aa14.03□□□□□ -0.16
SUMO2-202ENST00000420826 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
SUMO2-202ENST00000420826 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
SUMO2-202ENST00000420826 TIAM1Q13009 1591 aa13.97□□□□□ -0.17
SUMO2-202ENST00000420826 CTTNBP2Q8WZ74 1663 aa13.96□□□□□ -0.17
SUMO2-202ENST00000420826 CUL7Q14999 1698 aa13.96□□□□□ -0.17
SUMO2-202ENST00000420826 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
SUMO2-202ENST00000420826 PCF11O94913 1555 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms