RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
FGFR1-227ENST00000526570 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
FGFR1-227ENST00000526570 MYT1Q01538 1121 aa20.85■□□□□ 0.93
FGFR1-227ENST00000526570 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
FGFR1-227ENST00000526570 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
FGFR1-227ENST00000526570 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
FGFR1-227ENST00000526570 ERICH6Q7L0X2 663 aa19.6■□□□□ 0.73
FGFR1-227ENST00000526570 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
FGFR1-227ENST00000526570 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
FGFR1-227ENST00000526570 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
FGFR1-227ENST00000526570 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
FGFR1-227ENST00000526570 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
FGFR1-227ENST00000526570 HRCP23327 699 aa18.91■□□□□ 0.62
FGFR1-227ENST00000526570 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
FGFR1-227ENST00000526570 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
FGFR1-227ENST00000526570 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
FGFR1-227ENST00000526570 APLP2Q06481 763 aa18.64■□□□□ 0.58
FGFR1-227ENST00000526570 NEFLP07196 543 aa18.6■□□□□ 0.57
FGFR1-227ENST00000526570 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
FGFR1-227ENST00000526570 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
FGFR1-227ENST00000526570 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
FGFR1-227ENST00000526570 ABCC9O60706 1549 aa18.39■□□□□ 0.54
FGFR1-227ENST00000526570 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
FGFR1-227ENST00000526570 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
FGFR1-227ENST00000526570 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
FGFR1-227ENST00000526570 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
FGFR1-227ENST00000526570 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
FGFR1-227ENST00000526570 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.54e-6■□□□□ 9.3
FGFR1-227ENST00000526570 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
FGFR1-227ENST00000526570 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
FGFR1-227ENST00000526570 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
FGFR1-227ENST00000526570 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.47
FGFR1-227ENST00000526570 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.46
FGFR1-227ENST00000526570 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
FGFR1-227ENST00000526570 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
FGFR1-227ENST00000526570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
FGFR1-227ENST00000526570 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
FGFR1-227ENST00000526570 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
FGFR1-227ENST00000526570 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
FGFR1-227ENST00000526570 BCL11AQ9H165 835 aa17.63■□□□□ 0.41
FGFR1-227ENST00000526570 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
FGFR1-227ENST00000526570 BCANQ96GW7 911 aa17.6■□□□□ 0.41
FGFR1-227ENST00000526570 ITGAEP38570 1179 aa17.56■□□□□ 0.4
FGFR1-227ENST00000526570 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
FGFR1-227ENST00000526570 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
FGFR1-227ENST00000526570 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
FGFR1-227ENST00000526570 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
FGFR1-227ENST00000526570 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.39
FGFR1-227ENST00000526570 ZCCHC6Q5VYS8 1495 aaKnown RBP17.45■□□□□ 0.38
FGFR1-227ENST00000526570 FBLN2P98095 1184 aa17.39■□□□□ 0.37
FGFR1-227ENST00000526570 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
FGFR1-227ENST00000526570 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
FGFR1-227ENST00000526570 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
FGFR1-227ENST00000526570 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.34
FGFR1-227ENST00000526570 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
FGFR1-227ENST00000526570 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
FGFR1-227ENST00000526570 NBR1Q14596 966 aa17.13■□□□□ 0.33
FGFR1-227ENST00000526570 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
FGFR1-227ENST00000526570 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
FGFR1-227ENST00000526570 FKBP8Q14318 412 aa17.09■□□□□ 0.33
FGFR1-227ENST00000526570 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
FGFR1-227ENST00000526570 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
FGFR1-227ENST00000526570 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
FGFR1-227ENST00000526570 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
FGFR1-227ENST00000526570 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
FGFR1-227ENST00000526570 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
FGFR1-227ENST00000526570 NACADO15069 1562 aa17.01■□□□□ 0.31
FGFR1-227ENST00000526570 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
FGFR1-227ENST00000526570 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
FGFR1-227ENST00000526570 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
FGFR1-227ENST00000526570 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
FGFR1-227ENST00000526570 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
FGFR1-227ENST00000526570 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
FGFR1-227ENST00000526570 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
FGFR1-227ENST00000526570 ANP32CO43423 234 aa16.87■□□□□ 0.29
FGFR1-227ENST00000526570 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
FGFR1-227ENST00000526570 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
FGFR1-227ENST00000526570 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.29
FGFR1-227ENST00000526570 NAP1L5Q96NT1 182 aaPredicted RBP16.8■□□□□ 0.28
FGFR1-227ENST00000526570 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
FGFR1-227ENST00000526570 DEKP35659 375 aaKnown RBP16.78■□□□□ 0.28
FGFR1-227ENST00000526570 MIER1Q8N108 512 aa16.77■□□□□ 0.28
FGFR1-227ENST00000526570 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.28
FGFR1-227ENST00000526570 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.27
FGFR1-227ENST00000526570 NEFMP07197 916 aa16.74■□□□□ 0.27
FGFR1-227ENST00000526570 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
FGFR1-227ENST00000526570 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
FGFR1-227ENST00000526570 ARXQ96QS3 562 aa16.71■□□□□ 0.27
FGFR1-227ENST00000526570 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-227ENST00000526570 SUPT16HQ9Y5B9 1047 aaKnown RBP16.7■□□□□ 0.26
FGFR1-227ENST00000526570 AMER1Q5JTC6 1135 aaPredicted RBP16.68■□□□□ 0.26
FGFR1-227ENST00000526570 PODXL2Q9NZ53 605 aa16.6■□□□□ 0.25
FGFR1-227ENST00000526570 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
FGFR1-227ENST00000526570 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
FGFR1-227ENST00000526570 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.25
FGFR1-227ENST00000526570 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
FGFR1-227ENST00000526570 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
FGFR1-227ENST00000526570 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
FGFR1-227ENST00000526570 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
FGFR1-227ENST00000526570 NOP58Q9Y2X3 529 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms