RNA–Protein interactions for RNA: ENST00000526688.1

FGFR1-228, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-228ENST00000526688 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
FGFR1-228ENST00000526688 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
FGFR1-228ENST00000526688 ABCC9O60706 1549 aa30.94■■■□□ 2.54
FGFR1-228ENST00000526688 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
FGFR1-228ENST00000526688 NACADO15069 1562 aa29.3■■■□□ 2.28
FGFR1-228ENST00000526688 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
FGFR1-228ENST00000526688 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
FGFR1-228ENST00000526688 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
FGFR1-228ENST00000526688 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
FGFR1-228ENST00000526688 PABPN1Q86U42 306 aaKnown RBP eCLIP28.65■■■□□ 2.18
FGFR1-228ENST00000526688 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
FGFR1-228ENST00000526688 SHROOM4Q9ULL8 1493 aa28.41■■■□□ 2.14
FGFR1-228ENST00000526688 DCAF1Q9Y4B6 1507 aa28.35■■■□□ 2.13
FGFR1-228ENST00000526688 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
FGFR1-228ENST00000526688 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
FGFR1-228ENST00000526688 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
FGFR1-228ENST00000526688 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
FGFR1-228ENST00000526688 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
FGFR1-228ENST00000526688 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
FGFR1-228ENST00000526688 CUX2O14529 1486 aa27■■□□□ 1.91
FGFR1-228ENST00000526688 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
FGFR1-228ENST00000526688 HMGXB3Q12766 1538 aa26.81■■□□□ 1.88
FGFR1-228ENST00000526688 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
FGFR1-228ENST00000526688 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
FGFR1-228ENST00000526688 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
FGFR1-228ENST00000526688 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
FGFR1-228ENST00000526688 BAZ1AQ9NRL2 1556 aaPredicted RBP26.59■■□□□ 1.85
FGFR1-228ENST00000526688 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
FGFR1-228ENST00000526688 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
FGFR1-228ENST00000526688 NESP48681 1621 aa26.5■■□□□ 1.83
FGFR1-228ENST00000526688 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
FGFR1-228ENST00000526688 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
FGFR1-228ENST00000526688 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
FGFR1-228ENST00000526688 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
FGFR1-228ENST00000526688 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
FGFR1-228ENST00000526688 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
FGFR1-228ENST00000526688 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
FGFR1-228ENST00000526688 WDR62O43379 1518 aa26.03■■□□□ 1.76
FGFR1-228ENST00000526688 WIZO95785 1651 aa25.96■■□□□ 1.75
FGFR1-228ENST00000526688 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
FGFR1-228ENST00000526688 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
FGFR1-228ENST00000526688 CFTRP13569 1480 aa25.76■■□□□ 1.71
FGFR1-228ENST00000526688 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
FGFR1-228ENST00000526688 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
FGFR1-228ENST00000526688 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
FGFR1-228ENST00000526688 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
FGFR1-228ENST00000526688 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
FGFR1-228ENST00000526688 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
FGFR1-228ENST00000526688 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
FGFR1-228ENST00000526688 RIMBP3CA6NJZ7 1639 aa25.35■■□□□ 1.65
FGFR1-228ENST00000526688 RIMBP3BA6NNM3 1639 aa25.35■■□□□ 1.65
FGFR1-228ENST00000526688 RIMBP3Q9UFD9 1639 aa25.35■■□□□ 1.65
FGFR1-228ENST00000526688 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
FGFR1-228ENST00000526688 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
FGFR1-228ENST00000526688 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
FGFR1-228ENST00000526688 ZNF608Q9ULD9 1512 aaPredicted RBP25.24■■□□□ 1.63
FGFR1-228ENST00000526688 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
FGFR1-228ENST00000526688 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
FGFR1-228ENST00000526688 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
FGFR1-228ENST00000526688 CHD1O14646 1710 aa25.14■■□□□ 1.61
FGFR1-228ENST00000526688 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
FGFR1-228ENST00000526688 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
FGFR1-228ENST00000526688 POLA1P09884 1462 aaPredicted RBP24.97■■□□□ 1.59
FGFR1-228ENST00000526688 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.59
FGFR1-228ENST00000526688 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
FGFR1-228ENST00000526688 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
FGFR1-228ENST00000526688 SOGA1O94964 1423 aa24.84■■□□□ 1.57
FGFR1-228ENST00000526688 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
FGFR1-228ENST00000526688 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
FGFR1-228ENST00000526688 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
FGFR1-228ENST00000526688 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
FGFR1-228ENST00000526688 FBLN2P98095 1184 aa24.78■■□□□ 1.56
FGFR1-228ENST00000526688 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
FGFR1-228ENST00000526688 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
FGFR1-228ENST00000526688 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
FGFR1-228ENST00000526688 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
FGFR1-228ENST00000526688 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
FGFR1-228ENST00000526688 CUX1P39880 1505 aa24.7■■□□□ 1.54
FGFR1-228ENST00000526688 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
FGFR1-228ENST00000526688 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
FGFR1-228ENST00000526688 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
FGFR1-228ENST00000526688 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
FGFR1-228ENST00000526688 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
FGFR1-228ENST00000526688 ABCA10Q8WWZ4 1543 aa24.53■■□□□ 1.52
FGFR1-228ENST00000526688 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
FGFR1-228ENST00000526688 ADAMTS12P58397 1594 aa24.36■■□□□ 1.49
FGFR1-228ENST00000526688 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
FGFR1-228ENST00000526688 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
FGFR1-228ENST00000526688 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
FGFR1-228ENST00000526688 NUP160Q12769 1436 aa24.33■■□□□ 1.49
FGFR1-228ENST00000526688 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
FGFR1-228ENST00000526688 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
FGFR1-228ENST00000526688 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
FGFR1-228ENST00000526688 ERICH3Q5RHP9 1530 aa24.27■■□□□ 1.48
FGFR1-228ENST00000526688 ERCC6L2Q5T890 1561 aa24.26■■□□□ 1.47
FGFR1-228ENST00000526688 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
FGFR1-228ENST00000526688 KIF13AQ9H1H9 1805 aa24.21■■□□□ 1.47
FGFR1-228ENST00000526688 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
FGFR1-228ENST00000526688 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
FGFR1-228ENST00000526688 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms