RNA–Protein interactions for RNA: ENST00000494433.1

PRDX3-203, Transcript of peroxiredoxin 3, humanhuman

TSL 1 (best)

Gene PRDX3, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX3-203ENST00000494433 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
PRDX3-203ENST00000494433 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
PRDX3-203ENST00000494433 PELP1Q8IZL8 1130 aaKnown RBP15.87■□□□□ 0.13
PRDX3-203ENST00000494433 MYT1Q01538 1121 aa15.71■□□□□ 0.11
PRDX3-203ENST00000494433 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
PRDX3-203ENST00000494433 TTBK1Q5TCY1 1321 aaPredicted RBP15.22■□□□□ 0.03
PRDX3-203ENST00000494433 CCDC180Q9P1Z9 1646 aa15.2■□□□□ 0.02
PRDX3-203ENST00000494433 SHROOM4Q9ULL8 1493 aa15.19■□□□□ 0.02
PRDX3-203ENST00000494433 ZCCHC6Q5VYS8 1495 aaKnown RBP15.12■□□□□ 0.01
PRDX3-203ENST00000494433 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
PRDX3-203ENST00000494433 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.06
PRDX3-203ENST00000494433 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
PRDX3-203ENST00000494433 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
PRDX3-203ENST00000494433 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
PRDX3-203ENST00000494433 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
PRDX3-203ENST00000494433 APLP2Q06481 763 aa14.51□□□□□ -0.09
PRDX3-203ENST00000494433 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
PRDX3-203ENST00000494433 HRCP23327 699 aa14.35□□□□□ -0.11
PRDX3-203ENST00000494433 ABCC9O60706 1549 aa14.31□□□□□ -0.12
PRDX3-203ENST00000494433 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
PRDX3-203ENST00000494433 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
PRDX3-203ENST00000494433 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
PRDX3-203ENST00000494433 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
PRDX3-203ENST00000494433 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
PRDX3-203ENST00000494433 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
PRDX3-203ENST00000494433 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
PRDX3-203ENST00000494433 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.16
PRDX3-203ENST00000494433 NACADO15069 1562 aa14.02□□□□□ -0.17
PRDX3-203ENST00000494433 DAXXQ9UER7 740 aaPredicted RBP13.97□□□□□ -0.17
PRDX3-203ENST00000494433 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
PRDX3-203ENST00000494433 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
PRDX3-203ENST00000494433 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
PRDX3-203ENST00000494433 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
PRDX3-203ENST00000494433 CECR2Q9BXF3 1484 aa13.86□□□□□ -0.19
PRDX3-203ENST00000494433 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
PRDX3-203ENST00000494433 WIZO95785 1651 aa13.78□□□□□ -0.2
PRDX3-203ENST00000494433 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
PRDX3-203ENST00000494433 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
PRDX3-203ENST00000494433 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
PRDX3-203ENST00000494433 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
PRDX3-203ENST00000494433 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
PRDX3-203ENST00000494433 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
PRDX3-203ENST00000494433 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
PRDX3-203ENST00000494433 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
PRDX3-203ENST00000494433 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.24
PRDX3-203ENST00000494433 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
PRDX3-203ENST00000494433 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
PRDX3-203ENST00000494433 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
PRDX3-203ENST00000494433 ACIN1Q9UKV3 1341 aaKnown RBP13.5□□□□□ -0.25
PRDX3-203ENST00000494433 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
PRDX3-203ENST00000494433 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.26
PRDX3-203ENST00000494433 EEA1Q15075 1411 aa13.41□□□□□ -0.26
PRDX3-203ENST00000494433 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
PRDX3-203ENST00000494433 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
PRDX3-203ENST00000494433 SOGA1O94964 1423 aa13.37□□□□□ -0.27
PRDX3-203ENST00000494433 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
PRDX3-203ENST00000494433 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
PRDX3-203ENST00000494433 BICRAQ9NZM4 1560 aa13.34□□□□□ -0.27
PRDX3-203ENST00000494433 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
PRDX3-203ENST00000494433 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
PRDX3-203ENST00000494433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
PRDX3-203ENST00000494433 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
PRDX3-203ENST00000494433 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
PRDX3-203ENST00000494433 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
PRDX3-203ENST00000494433 GOLGA3Q08378 1498 aa13.3□□□□□ -0.28
PRDX3-203ENST00000494433 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRDX3-203ENST00000494433 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
PRDX3-203ENST00000494433 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.28
PRDX3-203ENST00000494433 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
PRDX3-203ENST00000494433 SYNJ1O43426 1573 aa13.21□□□□□ -0.29
PRDX3-203ENST00000494433 KIF21BO75037 1637 aa13.21□□□□□ -0.3
PRDX3-203ENST00000494433 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
PRDX3-203ENST00000494433 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
PRDX3-203ENST00000494433 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
PRDX3-203ENST00000494433 CLIP1P30622 1438 aa13.13□□□□□ -0.31
PRDX3-203ENST00000494433 ANO8Q9HCE9 1232 aaPredicted RBP13.12□□□□□ -0.31
PRDX3-203ENST00000494433 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
PRDX3-203ENST00000494433 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
PRDX3-203ENST00000494433 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
PRDX3-203ENST00000494433 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
PRDX3-203ENST00000494433 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
PRDX3-203ENST00000494433 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
PRDX3-203ENST00000494433 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
PRDX3-203ENST00000494433 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
PRDX3-203ENST00000494433 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
PRDX3-203ENST00000494433 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
PRDX3-203ENST00000494433 PKNOX2Q96KN3 472 aa12.96□□□□□ -0.34
PRDX3-203ENST00000494433 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
PRDX3-203ENST00000494433 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
PRDX3-203ENST00000494433 FOXD1Q16676 465 aa12.94□□□□□ -0.34
PRDX3-203ENST00000494433 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
PRDX3-203ENST00000494433 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
PRDX3-203ENST00000494433 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
PRDX3-203ENST00000494433 CUX1P39880 1505 aa12.9□□□□□ -0.34
PRDX3-203ENST00000494433 ARAP1Q96P48 1450 aa12.9□□□□□ -0.35
PRDX3-203ENST00000494433 KIF27Q86VH2 1401 aa12.89□□□□□ -0.35
PRDX3-203ENST00000494433 CFTRP13569 1480 aa12.86□□□□□ -0.35
PRDX3-203ENST00000494433 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
PRDX3-203ENST00000494433 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
PRDX3-203ENST00000494433 PRDM2Q13029 1718 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms