Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.575e-51■■■□□ 15.9
RPS3P23396 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.8□□□□□ -1.645e-51■■■□□ 15.9
RPS3P23396 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.14□□□□□ -2.075e-51■■■□□ 15.9
RPS3P23396 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.85□□□□□ -2.115e-51■■■□□ 15.9
RPS3P23396 UQCRC2-206ENST00000564095 542 ntTSL 43.11□□□□□ -1.918e-9■■■□□ 15.9
RPS3P23396 SPR-202ENST00000498749 947 ntTSL 320.56■□□□□ 0.887e-7■■■□□ 15.9
RPS3P23396 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.887e-7■■■□□ 15.9
RPS3P23396 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.467e-7■■■□□ 15.9
RPS3P23396 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.357e-7■■■□□ 15.9
RPS3P23396 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.317e-7■■■□□ 15.9
RPS3P23396 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.237e-7■■■□□ 15.9
RPS3P23396 NOMO2-206ENST00000564991 3765 ntTSL 515.14■□□□□ 0.017e-7■■■□□ 15.9
RPS3P23396 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.017e-7■■■□□ 15.9
RPS3P23396 ITIH3-210ENST00000495622 920 ntTSL 514.24□□□□□ -0.132e-10■■■□□ 15.9
RPS3P23396 PLOD1-209ENST00000491536 639 ntTSL 310.39□□□□□ -0.753e-7■■■□□ 15.9
RPS3P23396 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.362e-7■■■□□ 15.9
RPS3P23396 ETFA-214ENST00000560345 717 ntTSL 48.36□□□□□ -1.072e-7■■■□□ 15.9
RPS3P23396 CYP51A1-202ENST00000422867 747 ntTSL 35.37□□□□□ -1.552e-7■■■□□ 15.9
RPS3P23396 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.12■■□□□ 1.134e-7■■■□□ 15.9
RPS3P23396 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.944e-7■■■□□ 15.9
RPS3P23396 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.84e-7■■■□□ 15.9
RPS3P23396 PSMD3-204ENST00000540504 458 ntTSL 316.07■□□□□ 0.163e-8■■■□□ 15.9
RPS3P23396 TMEM258-205ENST00000540434 553 ntTSL 211.08□□□□□ -0.642e-6■■■□□ 15.9
RPS3P23396 ATP5J2-207ENST00000481899 738 ntTSL 24.35□□□□□ -1.714e-9■■■□□ 15.9
RPS3P23396 MARS-215ENST00000548944 294 ntTSL 313.55□□□□□ -0.241e-6■■■□□ 15.9
RPS3P23396 ASNS-204ENST00000414884 584 ntTSL 218.06■□□□□ 0.484e-33■■■□□ 15.9
RPS3P23396 COL9A3-207ENST00000467819 993 ntTSL 1 (best)20.15■□□□□ 0.822e-14■■■□□ 15.9
RPS3P23396 COL9A3-206ENST00000466532 539 ntTSL 218.37■□□□□ 0.532e-14■■■□□ 15.9
RPS3P23396 RETREG3-204ENST00000586796 576 ntTSL 221■□□□□ 0.953e-7■■■□□ 15.9
RPS3P23396 RETREG3-202ENST00000585726 522 ntTSL 421■□□□□ 0.953e-7■■■□□ 15.9
RPS3P23396 RETREG3-205ENST00000586870 1632 ntTSL 218.26■□□□□ 0.513e-7■■■□□ 15.9
RPS3P23396 RETREG3-212ENST00000593251 565 ntTSL 416.61■□□□□ 0.253e-7■■■□□ 15.9
RPS3P23396 RETREG3-210ENST00000590541 409 ntTSL 416.4■□□□□ 0.223e-7■■■□□ 15.9
RPS3P23396 RETREG3-206ENST00000588423 559 ntTSL 415.67■□□□□ 0.13e-7■■■□□ 15.9
RPS3P23396 RETREG3-208ENST00000589797 4149 ntTSL 214.01□□□□□ -0.173e-7■■■□□ 15.9
RPS3P23396 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC12.34□□□□□ -0.433e-7■■■□□ 15.9
RPS3P23396 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.463e-7■■■□□ 15.9
RPS3P23396 RETREG3-211ENST00000591547 564 ntTSL 49.3□□□□□ -0.923e-7■■■□□ 15.9
RPS3P23396 CFL1-209ENST00000530413 647 ntTSL 1 (best)14.42□□□□□ -0.14e-10■■■□□ 15.9
RPS3P23396 GPAA1-211ENST00000529503 878 ntTSL 520.08■□□□□ 0.811e-9■■■□□ 15.9
RPS3P23396 GPAA1-210ENST00000528073 986 ntTSL 319.44■□□□□ 0.71e-9■■■□□ 15.9
RPS3P23396 GPAA1-204ENST00000525087 937 ntTSL 518.78■□□□□ 0.61e-9■■■□□ 15.9
RPS3P23396 GPAA1-217ENST00000532758 1079 ntTSL 318.78■□□□□ 0.61e-9■■■□□ 15.9
RPS3P23396 GPAA1-214ENST00000530633 835 ntTSL 318.68■□□□□ 0.581e-9■■■□□ 15.9
RPS3P23396 GPAA1-203ENST00000524418 825 ntTSL 315.48■□□□□ 0.071e-9■■■□□ 15.9
RPS3P23396 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.18■■□□□ 1.32e-7■■■□□ 15.9
RPS3P23396 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.192e-7■■■□□ 15.9
RPS3P23396 SLC25A1-205ENST00000470922 1598 ntTSL 222.4■■□□□ 1.182e-7■■■□□ 15.9
RPS3P23396 DDX17-209ENST00000479734 441 ntTSL 415.33■□□□□ 0.049e-10■■■□□ 15.9
RPS3P23396 AC090004.1-202ENST00000601399 787 ntTSL 510.98□□□□□ -0.653e-7■■■□□ 15.9
RPS3P23396 HPN-204ENST00000593305 2175 ntTSL 219.44■□□□□ 0.72e-8■■■□□ 15.9
RPS3P23396 HPN-203ENST00000541345 1820 ntTSL 217.59■□□□□ 0.412e-8■■■□□ 15.9
RPS3P23396 KHSRP-204ENST00000595112 745 ntTSL 315.74■□□□□ 0.112e-6■■■□□ 15.9
RPS3P23396 KHSRP-210ENST00000599395 837 ntTSL 513.1□□□□□ -0.312e-6■■■□□ 15.9
RPS3P23396 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.731e-9■■■□□ 15.9
RPS3P23396 SERPINA5-201ENST00000329597 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.791e-9■■■□□ 15.9
RPS3P23396 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.32e-8■■■□□ 15.9
RPS3P23396 SLC7A2-206ENST00000640220 2068 ntTSL 1 (best)10.8□□□□□ -0.682e-8■■■□□ 15.9
RPS3P23396 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.91□□□□□ -0.982e-8■■■□□ 15.9
RPS3P23396 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.992e-8■■■□□ 15.9
RPS3P23396 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.132e-8■■■□□ 15.9
RPS3P23396 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.142e-8■■■□□ 15.9
RPS3P23396 ADAM10-214ENST00000559053 541 ntTSL 48.02□□□□□ -1.131e-9■■■□□ 15.9
RPS3P23396 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.165e-7■■■□□ 15.9
RPS3P23396 VAPA-204ENST00000577901 917 ntTSL 215.52■□□□□ 0.081e-18■■■□□ 15.9
RPS3P23396 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.99□□□□□ -0.011e-18■■■□□ 15.9
RPS3P23396 VAPA-209ENST00000585042 567 ntTSL 414.37□□□□□ -0.111e-18■■■□□ 15.9
RPS3P23396 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.311e-18■■■□□ 15.9
RPS3P23396 HSPA9-212ENST00000523929 780 ntTSL 413.88□□□□□ -0.197e-8■■■□□ 15.8
RPS3P23396 HSPA9-210ENST00000508003 582 ntTSL 210.9□□□□□ -0.663e-8■■■□□ 15.8
RPS3P23396 HSPA9-202ENST00000501917 275 ntTSL 32.16□□□□□ -2.067e-8■■■□□ 15.8
RPS3P23396 CAPRIN1-217ENST00000534825 668 ntTSL 317.36■□□□□ 0.375e-7■■■□□ 15.8
RPS3P23396 CAPRIN1-216ENST00000534042 574 ntTSL 516.1■□□□□ 0.175e-7■■■□□ 15.8
RPS3P23396 TPI1-209ENST00000535434 1587 ntTSL 2 BASIC10.58□□□□□ -0.721e-7■■■□□ 15.8
RPS3P23396 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.83■□□□□ 0.282e-7■■■□□ 15.8
RPS3P23396 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.52e-7■■■□□ 15.8
RPS3P23396 PTPRC-210ENST00000462363 926 ntTSL 1 (best)5.63□□□□□ -1.512e-7■■■□□ 15.8
RPS3P23396 PTPRC-204ENST00000367379 517 ntTSL 54.23□□□□□ -1.732e-7■■■□□ 15.8
RPS3P23396 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.742e-7■■■□□ 15.8
RPS3P23396 PTPRC-214ENST00000530727 1962 ntTSL 1 (best)3.77□□□□□ -1.812e-7■■■□□ 15.8
RPS3P23396 PTPRC-213ENST00000529828 2336 ntTSL 1 (best)3.27□□□□□ -1.892e-7■■■□□ 15.8
RPS3P23396 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.912e-7■■■□□ 15.8
RPS3P23396 PTPRC-203ENST00000367367 2291 ntTSL 23.03□□□□□ -1.922e-7■■■□□ 15.8
RPS3P23396 PTPRC-205ENST00000391970 408 ntTSL 1 (best)1.9□□□□□ -2.112e-7■■■□□ 15.8
RPS3P23396 PTPRC-207ENST00000418674 462 ntTSL 21.48□□□□□ -2.172e-7■■■□□ 15.8
RPS3P23396 PTPRC-208ENST00000427110 264 ntTSL 1 (best)1.3□□□□□ -2.22e-7■■■□□ 15.8
RPS3P23396 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.75■■□□□ 1.874e-8■■■□□ 15.8
RPS3P23396 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.344e-8■■■□□ 15.8
RPS3P23396 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.79■■□□□ 1.244e-8■■■□□ 15.8
RPS3P23396 MBOAT7-206ENST00000437868 2033 ntTSL 1 (best)19.11■□□□□ 0.654e-8■■■□□ 15.8
RPS3P23396 ETFA-207ENST00000559386 893 ntTSL 520.01■□□□□ 0.792e-7■■■□□ 15.8
RPS3P23396 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.06■■□□□ 1.282e-7■■■□□ 15.8
RPS3P23396 ACTN1-218ENST00000556343 274 ntTSL 39.14□□□□□ -0.959e-10■■■□□ 15.8
RPS3P23396 NDUFB8-209ENST00000531418 585 ntTSL 316.75■□□□□ 0.271e-8■■■□□ 15.8
RPS3P23396 NDUFB8-207ENST00000529437 602 ntTSL 216.17■□□□□ 0.181e-8■■■□□ 15.8
RPS3P23396 NAGPA-205ENST00000562346 570 ntTSL 419.4■□□□□ 0.71e-6■■■□□ 15.8
RPS3P23396 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.615e-8■■■□□ 15.8
RPS3P23396 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.295e-8■■■□□ 15.8
RPS3P23396 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.175e-8■■■□□ 15.8
RPS3P23396 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.15e-8■■■□□ 15.8
Retrieved 100 of 24,271 protein–RNA pairs in 211.5 ms