RNA–Protein interactions for RNA: ENST00000529503.5

GPAA1-211, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 5

Gene GPAA1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-211ENST00000529503 NISCHQ9Y2I1 1504 aa49.68■■■■■ 5.54
GPAA1-211ENST00000529503 CCDC180Q9P1Z9 1646 aa44.07■■■■■ 4.65
GPAA1-211ENST00000529503 ABCC9O60706 1549 aa43.14■■■■■ 4.5
GPAA1-211ENST00000529503 DCAF8L2P0C7V8 631 aa41.49■■■■■ 4.23
GPAA1-211ENST00000529503 ZCCHC6Q5VYS8 1495 aaKnown RBP41.43■■■■■ 4.22
GPAA1-211ENST00000529503 RB1CC1Q8TDY2 1594 aa41.38■■■■■ 4.22
GPAA1-211ENST00000529503 NACADO15069 1562 aa41.37■■■■■ 4.21
GPAA1-211ENST00000529503 MYO15BQ96JP2 1530 aa41.11■■■■■ 4.17
GPAA1-211ENST00000529503 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
GPAA1-211ENST00000529503 UNC13AQ9UPW8 1703 aa40.62■■■■■ 4.09
GPAA1-211ENST00000529503 SCRIBQ14160 1630 aa40.33■■■■■ 4.05
GPAA1-211ENST00000529503 PABPN1Q86U42 306 aaKnown RBP eCLIP40.29■■■■■ 4.04
GPAA1-211ENST00000529503 BICRAQ9NZM4 1560 aa40.21■■■■■ 4.03
GPAA1-211ENST00000529503 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
GPAA1-211ENST00000529503 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
GPAA1-211ENST00000529503 EIF4G1Q04637 1599 aaKnown RBP39.1■■■■□ 3.85
GPAA1-211ENST00000529503 CC2D2AQ9P2K1 1620 aa38.97■■■■□ 3.83
GPAA1-211ENST00000529503 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.8
GPAA1-211ENST00000529503 SMARCA4P51532 1647 aa38.54■■■■□ 3.76
GPAA1-211ENST00000529503 BAZ1AQ9NRL2 1556 aaPredicted RBP38.47■■■■□ 3.75
GPAA1-211ENST00000529503 MROH2BQ7Z745 1585 aa38.35■■■■□ 3.73
GPAA1-211ENST00000529503 ATAD2BQ9ULI0 1458 aa38.26■■■■□ 3.72
GPAA1-211ENST00000529503 SMARCA2P51531 1590 aa38.18■■■■□ 3.7
GPAA1-211ENST00000529503 NCAPD3P42695 1498 aa38.16■■■■□ 3.7
GPAA1-211ENST00000529503 PEG3Q9GZU2 1588 aa38.1■■■■□ 3.69
GPAA1-211ENST00000529503 HMGXB3Q12766 1538 aa38■■■■□ 3.67
GPAA1-211ENST00000529503 WIZO95785 1651 aa37.98■■■■□ 3.67
GPAA1-211ENST00000529503 BAZ1BQ9UIG0 1483 aaKnown RBP37.95■■■■□ 3.67
GPAA1-211ENST00000529503 RSF1Q96T23 1441 aaPredicted RBP37.93■■■■□ 3.66
GPAA1-211ENST00000529503 TOP2AP11388 1531 aaKnown RBP37.51■■■■□ 3.59
GPAA1-211ENST00000529503 NESP48681 1621 aa37.32■■■■□ 3.57
GPAA1-211ENST00000529503 ERCC6Q03468 1493 aa37.18■■■■□ 3.54
GPAA1-211ENST00000529503 SUPT5HO00267 1087 aaKnown RBP37.17■■■■□ 3.54
GPAA1-211ENST00000529503 LAMC3Q9Y6N6 1575 aa37.15■■■■□ 3.54
GPAA1-211ENST00000529503 CCDC88BA6NC98 1476 aa37.08■■■■□ 3.53
GPAA1-211ENST00000529503 CADPSQ9ULU8 1353 aa37.07■■■■□ 3.53
GPAA1-211ENST00000529503 KIF21AQ7Z4S6 1674 aa36.9■■■■□ 3.5
GPAA1-211ENST00000529503 CFTRP13569 1480 aa36.89■■■■□ 3.5
GPAA1-211ENST00000529503 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
GPAA1-211ENST00000529503 CUX2O14529 1486 aa36.84■■■■□ 3.49
GPAA1-211ENST00000529503 PRDM2Q13029 1718 aa36.72■■■■□ 3.47
GPAA1-211ENST00000529503 THOC2Q8NI27 1593 aaKnown RBP36.69■■■■□ 3.46
GPAA1-211ENST00000529503 FANCD2Q9BXW9 1451 aa36.69■■■■□ 3.46
GPAA1-211ENST00000529503 CEP164Q9UPV0 1460 aa36.62■■■■□ 3.45
GPAA1-211ENST00000529503 MRC2Q9UBG0 1479 aa36.52■■■■□ 3.44
GPAA1-211ENST00000529503 WDR62O43379 1518 aa36.4■■■■□ 3.42
GPAA1-211ENST00000529503 URB2Q14146 1524 aaKnown RBP36.34■■■■□ 3.41
GPAA1-211ENST00000529503 DNAJC5Q9H3Z4 198 aa36.15■■■■□ 3.38
GPAA1-211ENST00000529503 TOPBP1Q92547 1522 aa36.13■■■■□ 3.38
GPAA1-211ENST00000529503 DNMBPQ6XZF7 1577 aa36.09■■■■□ 3.37
GPAA1-211ENST00000529503 ABCC8Q09428 1581 aa36.03■■■■□ 3.36
GPAA1-211ENST00000529503 CUX1P39880 1505 aa35.96■■■■□ 3.35
GPAA1-211ENST00000529503 POLA1P09884 1462 aaPredicted RBP35.84■■■■□ 3.33
GPAA1-211ENST00000529503 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
GPAA1-211ENST00000529503 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
GPAA1-211ENST00000529503 WRNQ14191 1432 aaPredicted RBP eCLIP35.74■■■■□ 3.31
GPAA1-211ENST00000529503 TARBP1Q13395 1621 aaKnown RBP35.74■■■■□ 3.31
GPAA1-211ENST00000529503 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
GPAA1-211ENST00000529503 ZNF608Q9ULD9 1512 aaPredicted RBP35.73■■■■□ 3.31
GPAA1-211ENST00000529503 SYNJ1O43426 1573 aa35.72■■■■□ 3.31
GPAA1-211ENST00000529503 BIVM-ERCC5R4GMW8 1640 aa35.68■■■■□ 3.3
GPAA1-211ENST00000529503 SOGA1O94964 1423 aa35.67■■■■□ 3.3
GPAA1-211ENST00000529503 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
GPAA1-211ENST00000529503 EIF4G3O43432 1585 aaKnown RBP35.58■■■■□ 3.29
GPAA1-211ENST00000529503 AQRO60306 1485 aaKnown RBP eCLIP35.53■■■■□ 3.283e-10■■■■■ 43.6
GPAA1-211ENST00000529503 WDR97A6NE52 1622 aa35.52■■■■□ 3.28
GPAA1-211ENST00000529503 TDRD9Q8NDG6 1382 aaKnown RBP35.49■■■■□ 3.27
GPAA1-211ENST00000529503 ABCA10Q8WWZ4 1543 aa35.41■■■■□ 3.26
GPAA1-211ENST00000529503 OSCARQ8IYS5 282 aa35.32■■■■□ 3.24
GPAA1-211ENST00000529503 ABCA5Q8WWZ7 1642 aa35.3■■■■□ 3.24
GPAA1-211ENST00000529503 GAPVD1Q14C86 1478 aa35.27■■■■□ 3.24
GPAA1-211ENST00000529503 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
GPAA1-211ENST00000529503 GRIN2BQ13224 1484 aa35.22■■■■□ 3.23
GPAA1-211ENST00000529503 SNAPC4Q5SXM2 1469 aa35.21■■■■□ 3.23
GPAA1-211ENST00000529503 CHD1O14646 1710 aa35.15■■■■□ 3.22
GPAA1-211ENST00000529503 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
GPAA1-211ENST00000529503 FBLN2P98095 1184 aa35.06■■■■□ 3.2
GPAA1-211ENST00000529503 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
GPAA1-211ENST00000529503 ERICH3Q5RHP9 1530 aa34.97■■■■□ 3.19
GPAA1-211ENST00000529503 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
GPAA1-211ENST00000529503 ADAMTS12P58397 1594 aa34.96■■■■□ 3.19
GPAA1-211ENST00000529503 KIF27Q86VH2 1401 aa34.95■■■■□ 3.19
GPAA1-211ENST00000529503 CHMP7Q8WUX9 453 aaPredicted RBP34.94■■■■□ 3.18
GPAA1-211ENST00000529503 FHAD1B1AJZ9 1412 aa34.84■■■■□ 3.17
GPAA1-211ENST00000529503 RUSC2Q8N2Y8 1516 aa34.83■■■■□ 3.17
GPAA1-211ENST00000529503 IGF1RP08069 1367 aa34.81■■■■□ 3.16
GPAA1-211ENST00000529503 GRIN2AQ12879 1464 aa34.79■■■■□ 3.16
GPAA1-211ENST00000529503 RIMBP3CA6NJZ7 1639 aa34.79■■■■□ 3.16
GPAA1-211ENST00000529503 RIMBP3BA6NNM3 1639 aa34.79■■■■□ 3.16
GPAA1-211ENST00000529503 RIMBP3Q9UFD9 1639 aa34.79■■■■□ 3.16
GPAA1-211ENST00000529503 CHIC1Q5VXU3 224 aa34.76■■■■□ 3.16
GPAA1-211ENST00000529503 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
GPAA1-211ENST00000529503 CUL7Q14999 1698 aa34.71■■■■□ 3.15
GPAA1-211ENST00000529503 CLASP1Q7Z460 1538 aa34.7■■■■□ 3.14
GPAA1-211ENST00000529503 CEP170Q5SW79 1584 aa34.66■■■■□ 3.14
GPAA1-211ENST00000529503 CARMIL1Q5VZK9 1371 aa34.62■■■■□ 3.13
GPAA1-211ENST00000529503 NUP160Q12769 1436 aa34.61■■■■□ 3.13
GPAA1-211ENST00000529503 CYB5RLQ6IPT4 315 aa34.49■■■■□ 3.11
GPAA1-211ENST00000529503 ARAP1Q96P48 1450 aa34.45■■■■□ 3.1
GPAA1-211ENST00000529503 RAPGEF2Q9Y4G8 1499 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms