RNA–Protein interactions for RNA: ENST00000589913.5

RPL27-206, Transcript of ribosomal protein L27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27-206ENST00000589913 NISCHQ9Y2I1 1504 aa43.17■■■■■ 4.5
RPL27-206ENST00000589913 ABCC9O60706 1549 aa39.31■■■■□ 3.88
RPL27-206ENST00000589913 CCDC180Q9P1Z9 1646 aa38.93■■■■□ 3.82
RPL27-206ENST00000589913 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
RPL27-206ENST00000589913 DNAJC5BQ9UF47 199 aa37.08■■■■□ 3.53
RPL27-206ENST00000589913 NACADO15069 1562 aa36.83■■■■□ 3.49
RPL27-206ENST00000589913 DCAF8L2P0C7V8 631 aa36.69■■■■□ 3.46
RPL27-206ENST00000589913 PABPN1Q86U42 306 aaKnown RBP eCLIP36.52■■■■□ 3.44
RPL27-206ENST00000589913 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
RPL27-206ENST00000589913 BICRAQ9NZM4 1560 aa36.15■■■■□ 3.38
RPL27-206ENST00000589913 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
RPL27-206ENST00000589913 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
RPL27-206ENST00000589913 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
RPL27-206ENST00000589913 SCRIBQ14160 1630 aa35.55■■■■□ 3.28
RPL27-206ENST00000589913 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
RPL27-206ENST00000589913 CC2D2AQ9P2K1 1620 aa35.48■■■■□ 3.27
RPL27-206ENST00000589913 CECR2Q9BXF3 1484 aa35.4■■■■□ 3.26
RPL27-206ENST00000589913 EIF4G1Q04637 1599 aaKnown RBP35.3■■■■□ 3.24
RPL27-206ENST00000589913 DNAJC5Q9H3Z4 198 aa34.23■■■■□ 3.07
RPL27-206ENST00000589913 NCAPD3P42695 1498 aa33.96■■■■□ 3.03
RPL27-206ENST00000589913 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
RPL27-206ENST00000589913 CUX2O14529 1486 aa33.92■■■■□ 3.02
RPL27-206ENST00000589913 ATAD2BQ9ULI0 1458 aa33.87■■■■□ 3.01
RPL27-206ENST00000589913 SMARCA4P51532 1647 aa33.81■■■■□ 3
RPL27-206ENST00000589913 SMARCA2P51531 1590 aa33.77■■■■□ 3
RPL27-206ENST00000589913 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
RPL27-206ENST00000589913 NESP48681 1621 aa33.68■■■□□ 2.98
RPL27-206ENST00000589913 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
RPL27-206ENST00000589913 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
RPL27-206ENST00000589913 THOC2Q8NI27 1593 aaKnown RBP33.4■■■□□ 2.94
RPL27-206ENST00000589913 PEG3Q9GZU2 1588 aa33.39■■■□□ 2.94
RPL27-206ENST00000589913 LAMC3Q9Y6N6 1575 aa33.32■■■□□ 2.92
RPL27-206ENST00000589913 MROH2BQ7Z745 1585 aa33.31■■■□□ 2.92
RPL27-206ENST00000589913 KIF21AQ7Z4S6 1674 aa33.29■■■□□ 2.92
RPL27-206ENST00000589913 PDS5BQ9NTI5 1447 aa33.11■■■□□ 2.89
RPL27-206ENST00000589913 WIZO95785 1651 aa32.96■■■□□ 2.87
RPL27-206ENST00000589913 CADPSQ9ULU8 1353 aa32.94■■■□□ 2.86
RPL27-206ENST00000589913 MRC2Q9UBG0 1479 aa32.89■■■□□ 2.86
RPL27-206ENST00000589913 WDR62O43379 1518 aa32.82■■■□□ 2.84
RPL27-206ENST00000589913 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
RPL27-206ENST00000589913 CEP164Q9UPV0 1460 aa32.71■■■□□ 2.83
RPL27-206ENST00000589913 FANCD2Q9BXW9 1451 aa32.63■■■□□ 2.81
RPL27-206ENST00000589913 CFTRP13569 1480 aa32.49■■■□□ 2.79
RPL27-206ENST00000589913 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
RPL27-206ENST00000589913 RSF1Q96T23 1441 aaPredicted RBP32.44■■■□□ 2.78
RPL27-206ENST00000589913 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.78
RPL27-206ENST00000589913 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
RPL27-206ENST00000589913 OSCARQ8IYS5 282 aa32.29■■■□□ 2.76
RPL27-206ENST00000589913 CCDC88BA6NC98 1476 aa32.07■■■□□ 2.72
RPL27-206ENST00000589913 ZNF608Q9ULD9 1512 aaPredicted RBP32.06■■■□□ 2.72
RPL27-206ENST00000589913 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
RPL27-206ENST00000589913 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
RPL27-206ENST00000589913 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
RPL27-206ENST00000589913 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
RPL27-206ENST00000589913 TOPBP1Q92547 1522 aa31.98■■■□□ 2.71
RPL27-206ENST00000589913 EIF4G3O43432 1585 aaKnown RBP31.91■■■□□ 2.7
RPL27-206ENST00000589913 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
RPL27-206ENST00000589913 DNMBPQ6XZF7 1577 aa31.84■■■□□ 2.69
RPL27-206ENST00000589913 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
RPL27-206ENST00000589913 CHD1O14646 1710 aa31.78■■■□□ 2.68
RPL27-206ENST00000589913 TARBP1Q13395 1621 aaKnown RBP31.72■■■□□ 2.67
RPL27-206ENST00000589913 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.674e-8■■■■□ 20.1
RPL27-206ENST00000589913 CYB5RLQ6IPT4 315 aa31.63■■■□□ 2.65
RPL27-206ENST00000589913 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
RPL27-206ENST00000589913 FBLN2P98095 1184 aa31.62■■■□□ 2.65
RPL27-206ENST00000589913 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
RPL27-206ENST00000589913 ARAP1Q96P48 1450 aa31.53■■■□□ 2.64
RPL27-206ENST00000589913 TDRD9Q8NDG6 1382 aaKnown RBP31.46■■■□□ 2.63
RPL27-206ENST00000589913 SOGA1O94964 1423 aa31.45■■■□□ 2.63
RPL27-206ENST00000589913 TRHP20396 242 aaPredicted RBP31.43■■■□□ 2.62
RPL27-206ENST00000589913 SNAPC4Q5SXM2 1469 aa31.41■■■□□ 2.62
RPL27-206ENST00000589913 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
RPL27-206ENST00000589913 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
RPL27-206ENST00000589913 CUX1P39880 1505 aa31.32■■■□□ 2.6
RPL27-206ENST00000589913 CLASP1Q7Z460 1538 aa31.3■■■□□ 2.6
RPL27-206ENST00000589913 SYNJ1O43426 1573 aa31.28■■■□□ 2.6
RPL27-206ENST00000589913 CHMP7Q8WUX9 453 aaPredicted RBP31.26■■■□□ 2.59
RPL27-206ENST00000589913 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
RPL27-206ENST00000589913 GRIN2BQ13224 1484 aa31.22■■■□□ 2.59
RPL27-206ENST00000589913 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
RPL27-206ENST00000589913 SYNJ2O15056 1496 aa31.16■■■□□ 2.58
RPL27-206ENST00000589913 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
RPL27-206ENST00000589913 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
RPL27-206ENST00000589913 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
RPL27-206ENST00000589913 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
RPL27-206ENST00000589913 ERCC6L2Q5T890 1561 aa30.86■■■□□ 2.53
RPL27-206ENST00000589913 GRIN2AQ12879 1464 aa30.84■■■□□ 2.53
RPL27-206ENST00000589913 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
RPL27-206ENST00000589913 CEP170Q5SW79 1584 aa30.79■■■□□ 2.52
RPL27-206ENST00000589913 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
RPL27-206ENST00000589913 AEBP2Q6ZN18 517 aaPredicted RBP30.75■■■□□ 2.51
RPL27-206ENST00000589913 BIVM-ERCC5R4GMW8 1640 aa30.75■■■□□ 2.51
RPL27-206ENST00000589913 TOP2BQ02880 1626 aa30.71■■■□□ 2.51
RPL27-206ENST00000589913 NUP160Q12769 1436 aa30.71■■■□□ 2.51
RPL27-206ENST00000589913 SHROOM2Q13796 1616 aa30.65■■■□□ 2.5
RPL27-206ENST00000589913 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
RPL27-206ENST00000589913 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
RPL27-206ENST00000589913 KIF13AQ9H1H9 1805 aa30.5■■■□□ 2.47
RPL27-206ENST00000589913 PRG4Q92954 1404 aaPredicted RBP30.47■■■□□ 2.47
RPL27-206ENST00000589913 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms