RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 AEBP2Q6ZN18 517 aaPredicted RBP34.06■■■■□ 3.04
PTPRC-204ENST00000367379 CHIC1Q5VXU3 224 aa32.51■■■□□ 2.79
PTPRC-204ENST00000367379 SENP3Q9H4L4 574 aaPredicted RBP29■■■□□ 2.23
PTPRC-204ENST00000367379 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
PTPRC-204ENST00000367379 FOXD1Q16676 465 aa27.02■■□□□ 1.92
PTPRC-204ENST00000367379 PLPPR3Q6T4P5 718 aa26.03■■□□□ 1.76
PTPRC-204ENST00000367379 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
PTPRC-204ENST00000367379 ADRA2BP18089 450 aa25.31■■□□□ 1.64
PTPRC-204ENST00000367379 PIAS4Q8N2W9 510 aaPredicted RBP25.25■■□□□ 1.63
PTPRC-204ENST00000367379 MSH5O43196 834 aa25.21■■□□□ 1.63
PTPRC-204ENST00000367379 POTEDQ86YR6 584 aa24.31■■□□□ 1.48
PTPRC-204ENST00000367379 MAPK8IP2Q13387 824 aaPredicted RBP23.19■■□□□ 1.3
PTPRC-204ENST00000367379 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
PTPRC-204ENST00000367379 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
PTPRC-204ENST00000367379 PPP4R3CPQ6ZMV5 832 aa22.84■■□□□ 1.25
PTPRC-204ENST00000367379 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
PTPRC-204ENST00000367379 HOXD11P31277 338 aaPredicted RBP22.29■■□□□ 1.16
PTPRC-204ENST00000367379 RNF216Q9NWF9 866 aaPredicted RBP22.14■■□□□ 1.13
PTPRC-204ENST00000367379 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
PTPRC-204ENST00000367379 DCAF8L1A6NGE4 600 aa21.97■■□□□ 1.11
PTPRC-204ENST00000367379 NPM3O75607 178 aaKnown RBP21.71■■□□□ 1.07
PTPRC-204ENST00000367379 RNF39Q9H2S5 420 aa21.55■■□□□ 1.04
PTPRC-204ENST00000367379 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
PTPRC-204ENST00000367379 CACNB1Q02641 598 aaPredicted RBP21.48■■□□□ 1.03
PTPRC-204ENST00000367379 KCNA4P22459 653 aa21.43■■□□□ 1.02
PTPRC-204ENST00000367379 C1QBPQ07021 282 aaKnown RBP21.23■□□□□ 0.99
PTPRC-204ENST00000367379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.98
PTPRC-204ENST00000367379 U3KPZ7 1027 aaPredicted RBP20.78■□□□□ 0.92
PTPRC-204ENST00000367379 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
PTPRC-204ENST00000367379 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
PTPRC-204ENST00000367379 CAPN15O75808 1086 aa20.32■□□□□ 0.84
PTPRC-204ENST00000367379 SLC4A1APQ9BWU0 796 aaKnown RBP20.25■□□□□ 0.83
PTPRC-204ENST00000367379 DSG3P32926 999 aa20.23■□□□□ 0.83
PTPRC-204ENST00000367379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
PTPRC-204ENST00000367379 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
PTPRC-204ENST00000367379 APLP2Q06481 763 aa20.18■□□□□ 0.82
PTPRC-204ENST00000367379 SAMD1Q6SPF0 538 aaPredicted RBP20.12■□□□□ 0.81
PTPRC-204ENST00000367379 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
PTPRC-204ENST00000367379 ZNF219Q9P2Y4 722 aaPredicted RBP20.04■□□□□ 0.8
PTPRC-204ENST00000367379 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
PTPRC-204ENST00000367379 FOXD4L1Q9NU39 408 aa19.95■□□□□ 0.78
PTPRC-204ENST00000367379 ABCB7O75027 752 aa19.87■□□□□ 0.77
PTPRC-204ENST00000367379 ZBTB22O15209 634 aa19.74■□□□□ 0.75
PTPRC-204ENST00000367379 ATF5Q9Y2D1 282 aaPredicted RBP19.6■□□□□ 0.73
PTPRC-204ENST00000367379 POLA2Q14181 598 aa19.56■□□□□ 0.72
PTPRC-204ENST00000367379 ATXN8OSP0DMR3 200 aa19.35■□□□□ 0.69
PTPRC-204ENST00000367379 RBM42Q9BTD8 480 aaKnown RBP19.27■□□□□ 0.68
PTPRC-204ENST00000367379 ZBTB12Q9Y330 459 aaPredicted RBP19.2■□□□□ 0.66
PTPRC-204ENST00000367379 POTEHQ6S545 545 aa19.08■□□□□ 0.64
PTPRC-204ENST00000367379 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
PTPRC-204ENST00000367379 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
PTPRC-204ENST00000367379 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
PTPRC-204ENST00000367379 CHRDL2Q6WN34 429 aa18.78■□□□□ 0.6
PTPRC-204ENST00000367379 FBLN2P98095 1184 aa18.77■□□□□ 0.6
PTPRC-204ENST00000367379 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
PTPRC-204ENST00000367379 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
PTPRC-204ENST00000367379 REM2Q8IYK8 340 aaPredicted RBP18.7■□□□□ 0.58
PTPRC-204ENST00000367379 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
PTPRC-204ENST00000367379 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
PTPRC-204ENST00000367379 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
PTPRC-204ENST00000367379 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
PTPRC-204ENST00000367379 SSUH2Q9Y2M2 353 aa18.43■□□□□ 0.54
PTPRC-204ENST00000367379 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
PTPRC-204ENST00000367379 PIP4P2Q8N4L2 257 aa18.38■□□□□ 0.53
PTPRC-204ENST00000367379 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTPRC-204ENST00000367379 SPDYE1Q8NFV5 336 aaPredicted RBP18.25■□□□□ 0.51
PTPRC-204ENST00000367379 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
PTPRC-204ENST00000367379 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTPRC-204ENST00000367379 PRKAR2AP13861 404 aaKnown RBP18■□□□□ 0.47
PTPRC-204ENST00000367379 SP7Q8TDD2 431 aaPredicted RBP17.97■□□□□ 0.47
PTPRC-204ENST00000367379 HAX1O00165 279 aa17.95■□□□□ 0.46
PTPRC-204ENST00000367379 PRR29P0C7W0 189 aa17.9■□□□□ 0.46
PTPRC-204ENST00000367379 SPDYE4A6NLX3 237 aa17.88■□□□□ 0.45
PTPRC-204ENST00000367379 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
PTPRC-204ENST00000367379 EVX2Q03828 476 aa17.8■□□□□ 0.44
PTPRC-204ENST00000367379 C19orf67A6NJJ6 358 aa17.73■□□□□ 0.43
PTPRC-204ENST00000367379 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
PTPRC-204ENST00000367379 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
PTPRC-204ENST00000367379 PROM2Q8N271 834 aa17.57■□□□□ 0.4
PTPRC-204ENST00000367379 CREBZFQ9NS37 354 aa17.55■□□□□ 0.4
PTPRC-204ENST00000367379 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
PTPRC-204ENST00000367379 GABBR2O75899 941 aa17.4■□□□□ 0.38
PTPRC-204ENST00000367379 MNX1P50219 401 aaPredicted RBP17.31■□□□□ 0.36
PTPRC-204ENST00000367379 CLCN6P51797 869 aa17.22■□□□□ 0.35
PTPRC-204ENST00000367379 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
PTPRC-204ENST00000367379 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
PTPRC-204ENST00000367379 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRC-204ENST00000367379 FKBP8Q14318 412 aa17.14■□□□□ 0.33
PTPRC-204ENST00000367379 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
PTPRC-204ENST00000367379 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
PTPRC-204ENST00000367379 MIER1Q8N108 512 aa17.02■□□□□ 0.32
PTPRC-204ENST00000367379 PHF12Q96QT6 1004 aa17■□□□□ 0.31
PTPRC-204ENST00000367379 GALR2O43603 387 aaPredicted RBP16.97■□□□□ 0.31
PTPRC-204ENST00000367379 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
PTPRC-204ENST00000367379 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
PTPRC-204ENST00000367379 PLCD3Q8N3E9 789 aa16.88■□□□□ 0.29
PTPRC-204ENST00000367379 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
PTPRC-204ENST00000367379 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
PTPRC-204ENST00000367379 LHX8Q68G74 356 aa16.84■□□□□ 0.29
PTPRC-204ENST00000367379 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms