RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 AEBP2Q6ZN18 517 aaPredicted RBP11.22□□□□□ -0.61
PTPRC-203ENST00000367367 CHIC1Q5VXU3 224 aa10.45□□□□□ -0.74
PTPRC-203ENST00000367367 POTEDQ86YR6 584 aa9.89□□□□□ -0.83
PTPRC-203ENST00000367367 SENP3Q9H4L4 574 aaPredicted RBP9.68□□□□□ -0.86
PTPRC-203ENST00000367367 PHF23Q9BUL5 403 aaPredicted RBP9.44□□□□□ -0.9
PTPRC-203ENST00000367367 FOXD1Q16676 465 aa9.12□□□□□ -0.95
PTPRC-203ENST00000367367 MSH5O43196 834 aa8.82□□□□□ -1
PTPRC-203ENST00000367367 PIAS4Q8N2W9 510 aaPredicted RBP8.31□□□□□ -1.08
PTPRC-203ENST00000367367 PPP6R1Q9UPN7 881 aa8□□□□□ -1.13
PTPRC-203ENST00000367367 CACNB1Q02641 598 aaPredicted RBP7.99□□□□□ -1.13
PTPRC-203ENST00000367367 ADRA2BP18089 450 aa7.96□□□□□ -1.13
PTPRC-203ENST00000367367 PLPPR3Q6T4P5 718 aa7.76□□□□□ -1.17
PTPRC-203ENST00000367367 POTEHQ6S545 545 aa7.59□□□□□ -1.19
PTPRC-203ENST00000367367 NISCHQ9Y2I1 1504 aa7.58□□□□□ -1.2
PTPRC-203ENST00000367367 DMRT2Q9Y5R5 561 aa7.57□□□□□ -1.2
PTPRC-203ENST00000367367 MAPK8IP2Q13387 824 aaPredicted RBP7.49□□□□□ -1.21
PTPRC-203ENST00000367367 RNF39Q9H2S5 420 aa7.47□□□□□ -1.21
PTPRC-203ENST00000367367 DCAF8L1A6NGE4 600 aa7.31□□□□□ -1.24
PTPRC-203ENST00000367367 C1QBPQ07021 282 aaKnown RBP7.31□□□□□ -1.24
PTPRC-203ENST00000367367 SCAF1Q9H7N4 1312 aaKnown RBP7.24□□□□□ -1.25
PTPRC-203ENST00000367367 HOXD11P31277 338 aaPredicted RBP7.01□□□□□ -1.29
PTPRC-203ENST00000367367 DNAJC5BQ9UF47 199 aa6.95□□□□□ -1.3
PTPRC-203ENST00000367367 RNF216Q9NWF9 866 aaPredicted RBP6.79□□□□□ -1.32
PTPRC-203ENST00000367367 CCDC180Q9P1Z9 1646 aa6.78□□□□□ -1.32
PTPRC-203ENST00000367367 SP7Q8TDD2 431 aaPredicted RBP6.76□□□□□ -1.33
PTPRC-203ENST00000367367 PPP4R3CPQ6ZMV5 832 aa6.75□□□□□ -1.33
PTPRC-203ENST00000367367 EHMT2Q96KQ7 1210 aa6.75□□□□□ -1.33
PTPRC-203ENST00000367367 DSG3P32926 999 aa6.74□□□□□ -1.33
PTPRC-203ENST00000367367 CNKSR2Q8WXI2 1034 aa6.73□□□□□ -1.33
PTPRC-203ENST00000367367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTPRC-203ENST00000367367 CAPN15O75808 1086 aa6.62□□□□□ -1.35
PTPRC-203ENST00000367367 ABCC9O60706 1549 aa6.59□□□□□ -1.35
PTPRC-203ENST00000367367 CHRDL2Q6WN34 429 aa6.59□□□□□ -1.36
PTPRC-203ENST00000367367 SPINK5Q9NQ38 1064 aaPredicted RBP6.59□□□□□ -1.36
PTPRC-203ENST00000367367 PLSCR2Q9NRY7 297 aa6.57□□□□□ -1.36
PTPRC-203ENST00000367367 KCNA4P22459 653 aa6.57□□□□□ -1.36
PTPRC-203ENST00000367367 U3KPZ7 1027 aaPredicted RBP6.49□□□□□ -1.37
PTPRC-203ENST00000367367 CSRNP3Q8WYN3 585 aa6.45□□□□□ -1.38
PTPRC-203ENST00000367367 ABCB7O75027 752 aa6.43□□□□□ -1.38
PTPRC-203ENST00000367367 RBM42Q9BTD8 480 aaKnown RBP6.43□□□□□ -1.38
PTPRC-203ENST00000367367 TRHP20396 242 aaPredicted RBP6.39□□□□□ -1.39
PTPRC-203ENST00000367367 SLC24A1O60721 1099 aa6.38□□□□□ -1.39
PTPRC-203ENST00000367367 RB1CC1Q8TDY2 1594 aa6.34□□□□□ -1.39
PTPRC-203ENST00000367367 HAX1O00165 279 aa6.33□□□□□ -1.4
PTPRC-203ENST00000367367 ZCCHC6Q5VYS8 1495 aaKnown RBP6.33□□□□□ -1.4
PTPRC-203ENST00000367367 LHX8Q68G74 356 aa6.33□□□□□ -1.4
PTPRC-203ENST00000367367 NACADO15069 1562 aa6.32□□□□□ -1.4
PTPRC-203ENST00000367367 DCAF8L2P0C7V8 631 aa6.32□□□□□ -1.4
PTPRC-203ENST00000367367 NCBP3Q53F19 620 aaKnown RBP6.31□□□□□ -1.4
PTPRC-203ENST00000367367 UNC13AQ9UPW8 1703 aa6.31□□□□□ -1.4
PTPRC-203ENST00000367367 ZNF219Q9P2Y4 722 aaPredicted RBP6.29□□□□□ -1.4
PTPRC-203ENST00000367367 PIP4P2Q8N4L2 257 aa6.27□□□□□ -1.41
PTPRC-203ENST00000367367 MYO15BQ96JP2 1530 aa6.26□□□□□ -1.41
PTPRC-203ENST00000367367 DCAF1Q9Y4B6 1507 aa6.25□□□□□ -1.41
PTPRC-203ENST00000367367 RTN4Q9NQC3 1192 aaKnown RBP6.25□□□□□ -1.41
PTPRC-203ENST00000367367 NPM3O75607 178 aaKnown RBP6.23□□□□□ -1.41
PTPRC-203ENST00000367367 EVX2Q03828 476 aa6.23□□□□□ -1.41
PTPRC-203ENST00000367367 APLP2Q06481 763 aa6.22□□□□□ -1.41
PTPRC-203ENST00000367367 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
PTPRC-203ENST00000367367 SLC4A1APQ9BWU0 796 aaKnown RBP6.18□□□□□ -1.42
PTPRC-203ENST00000367367 ZBTB22O15209 634 aa6.17□□□□□ -1.42
PTPRC-203ENST00000367367 BICRAQ9NZM4 1560 aa6.17□□□□□ -1.42
PTPRC-203ENST00000367367 PABPN1Q86U42 306 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRC-203ENST00000367367 FXR2P51116 673 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPRC-203ENST00000367367 AKT1S1Q96B36 256 aa6.13□□□□□ -1.43
PTPRC-203ENST00000367367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.09□□□□□ -1.44
PTPRC-203ENST00000367367 SLC4A2P04920 1241 aa6.09□□□□□ -1.44
PTPRC-203ENST00000367367 HNRNPUL2Q1KMD3 747 aaKnown RBP6.09□□□□□ -1.44
PTPRC-203ENST00000367367 REM2Q8IYK8 340 aaPredicted RBP6.07□□□□□ -1.44
PTPRC-203ENST00000367367 POLA2Q14181 598 aa6.06□□□□□ -1.44
PTPRC-203ENST00000367367 SHROOM4Q9ULL8 1493 aa6.05□□□□□ -1.44
PTPRC-203ENST00000367367 GABBR2O75899 941 aa6.04□□□□□ -1.44
PTPRC-203ENST00000367367 SAMD1Q6SPF0 538 aaPredicted RBP6.03□□□□□ -1.44
PTPRC-203ENST00000367367 PITPNM1O00562 1244 aa6.01□□□□□ -1.45
PTPRC-203ENST00000367367 EIF4G1Q04637 1599 aaKnown RBP6□□□□□ -1.45
PTPRC-203ENST00000367367 POTEMA6NI47 508 aa5.99□□□□□ -1.45
PTPRC-203ENST00000367367 CC2D2AQ9P2K1 1620 aa5.98□□□□□ -1.45
PTPRC-203ENST00000367367 PCDH10Q9P2E7 1040 aa5.97□□□□□ -1.45
PTPRC-203ENST00000367367 C19orf67A6NJJ6 358 aa5.96□□□□□ -1.46
PTPRC-203ENST00000367367 POTEGQ6S5H5 508 aa5.95□□□□□ -1.46
PTPRC-203ENST00000367367 AMER1Q5JTC6 1135 aaPredicted RBP5.94□□□□□ -1.46
PTPRC-203ENST00000367367 POTEIP0CG38 1075 aa5.93□□□□□ -1.46
PTPRC-203ENST00000367367 CECR2Q9BXF3 1484 aa5.92□□□□□ -1.46
PTPRC-203ENST00000367367 SMARCA4P51532 1647 aa5.91□□□□□ -1.46
PTPRC-203ENST00000367367 OSCARQ8IYS5 282 aa5.9□□□□□ -1.46
PTPRC-203ENST00000367367 BAZ1AQ9NRL2 1556 aaPredicted RBP5.88□□□□□ -1.47
PTPRC-203ENST00000367367 PRKAR2AP13861 404 aaKnown RBP5.86□□□□□ -1.47
PTPRC-203ENST00000367367 MROH2BQ7Z745 1585 aa5.86□□□□□ -1.47
PTPRC-203ENST00000367367 ZBTB12Q9Y330 459 aaPredicted RBP5.85□□□□□ -1.47
PTPRC-203ENST00000367367 OTUD5Q96G74 571 aa5.84□□□□□ -1.47
PTPRC-203ENST00000367367 SMARCA2P51531 1590 aa5.84□□□□□ -1.47
PTPRC-203ENST00000367367 ATAD2BQ9ULI0 1458 aa5.84□□□□□ -1.47
PTPRC-203ENST00000367367 WIZO95785 1651 aa5.84□□□□□ -1.48
PTPRC-203ENST00000367367 PEG3Q9GZU2 1588 aa5.83□□□□□ -1.48
PTPRC-203ENST00000367367 HMGXB3Q12766 1538 aa5.82□□□□□ -1.48
PTPRC-203ENST00000367367 PRKCSHP14314 528 aaPredicted RBP5.81□□□□□ -1.48
PTPRC-203ENST00000367367 NCAPD3P42695 1498 aa5.81□□□□□ -1.48
PTPRC-203ENST00000367367 BAZ1BQ9UIG0 1483 aaKnown RBP5.8□□□□□ -1.48
PTPRC-203ENST00000367367 RSF1Q96T23 1441 aaPredicted RBP5.77□□□□□ -1.49
PTPRC-203ENST00000367367 MYCNP04198 464 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms