RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
CAPRIN1-216ENST00000534042 ABCC9O60706 1549 aa37.99■■■■□ 3.67
CAPRIN1-216ENST00000534042 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
CAPRIN1-216ENST00000534042 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
CAPRIN1-216ENST00000534042 NACADO15069 1562 aa35.89■■■■□ 3.34
CAPRIN1-216ENST00000534042 DCAF8L2P0C7V8 631 aa35.77■■■■□ 3.32
CAPRIN1-216ENST00000534042 DNAJC5BQ9UF47 199 aa35.68■■■■□ 3.3
CAPRIN1-216ENST00000534042 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
CAPRIN1-216ENST00000534042 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
CAPRIN1-216ENST00000534042 UNC13AQ9UPW8 1703 aa35.31■■■■□ 3.24
CAPRIN1-216ENST00000534042 BICRAQ9NZM4 1560 aa35.06■■■■□ 3.2
CAPRIN1-216ENST00000534042 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
CAPRIN1-216ENST00000534042 DCAF1Q9Y4B6 1507 aa34.89■■■■□ 3.18
CAPRIN1-216ENST00000534042 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
CAPRIN1-216ENST00000534042 SCRIBQ14160 1630 aa34.56■■■■□ 3.12
CAPRIN1-216ENST00000534042 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
CAPRIN1-216ENST00000534042 CECR2Q9BXF3 1484 aa34.23■■■■□ 3.07
CAPRIN1-216ENST00000534042 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
CAPRIN1-216ENST00000534042 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
CAPRIN1-216ENST00000534042 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
CAPRIN1-216ENST00000534042 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
CAPRIN1-216ENST00000534042 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
CAPRIN1-216ENST00000534042 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
CAPRIN1-216ENST00000534042 ERCC6Q03468 1493 aa32.82■■■□□ 2.84
CAPRIN1-216ENST00000534042 DNAJC5Q9H3Z4 198 aa32.81■■■□□ 2.84
CAPRIN1-216ENST00000534042 BAZ1AQ9NRL2 1556 aaPredicted RBP32.81■■■□□ 2.84
CAPRIN1-216ENST00000534042 CUX2O14529 1486 aa32.76■■■□□ 2.84
CAPRIN1-216ENST00000534042 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
CAPRIN1-216ENST00000534042 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
CAPRIN1-216ENST00000534042 NESP48681 1621 aa32.62■■■□□ 2.81
CAPRIN1-216ENST00000534042 MROH2BQ7Z745 1585 aa32.56■■■□□ 2.8
CAPRIN1-216ENST00000534042 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
CAPRIN1-216ENST00000534042 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
CAPRIN1-216ENST00000534042 PDS5BQ9NTI5 1447 aa32.23■■■□□ 2.75
CAPRIN1-216ENST00000534042 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
CAPRIN1-216ENST00000534042 WIZO95785 1651 aa32.17■■■□□ 2.74
CAPRIN1-216ENST00000534042 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
CAPRIN1-216ENST00000534042 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
CAPRIN1-216ENST00000534042 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
CAPRIN1-216ENST00000534042 WDR62O43379 1518 aa31.84■■■□□ 2.69
CAPRIN1-216ENST00000534042 CEP164Q9UPV0 1460 aa31.8■■■□□ 2.68
CAPRIN1-216ENST00000534042 FANCD2Q9BXW9 1451 aa31.76■■■□□ 2.67
CAPRIN1-216ENST00000534042 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
CAPRIN1-216ENST00000534042 CFTRP13569 1480 aa31.74■■■□□ 2.67
CAPRIN1-216ENST00000534042 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
CAPRIN1-216ENST00000534042 PRDM2Q13029 1718 aa31.43■■■□□ 2.62
CAPRIN1-216ENST00000534042 CCDC88BA6NC98 1476 aa31.41■■■□□ 2.62
CAPRIN1-216ENST00000534042 TRIM41Q8WV44 630 aa31.38■■■□□ 2.61
CAPRIN1-216ENST00000534042 OSCARQ8IYS5 282 aa31.31■■■□□ 2.6
CAPRIN1-216ENST00000534042 IFT140Q96RY7 1462 aa31.17■■■□□ 2.58
CAPRIN1-216ENST00000534042 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
CAPRIN1-216ENST00000534042 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
CAPRIN1-216ENST00000534042 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
CAPRIN1-216ENST00000534042 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
CAPRIN1-216ENST00000534042 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
CAPRIN1-216ENST00000534042 TARBP1Q13395 1621 aaKnown RBP30.86■■■□□ 2.53
CAPRIN1-216ENST00000534042 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
CAPRIN1-216ENST00000534042 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
CAPRIN1-216ENST00000534042 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
CAPRIN1-216ENST00000534042 AQRO60306 1485 aaKnown RBP eCLIP30.84■■■□□ 2.533e-9■■■■■ 39.6
CAPRIN1-216ENST00000534042 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.53
CAPRIN1-216ENST00000534042 ARHGEF11O15085 1522 aa30.75■■■□□ 2.51
CAPRIN1-216ENST00000534042 RAD54L2Q9Y4B4 1467 aa30.72■■■□□ 2.51
CAPRIN1-216ENST00000534042 CHD1O14646 1710 aa30.72■■■□□ 2.51
CAPRIN1-216ENST00000534042 SOGA1O94964 1423 aa30.72■■■□□ 2.51
CAPRIN1-216ENST00000534042 FBLN2P98095 1184 aa30.7■■■□□ 2.51
CAPRIN1-216ENST00000534042 TDRD9Q8NDG6 1382 aaKnown RBP30.66■■■□□ 2.5
CAPRIN1-216ENST00000534042 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
CAPRIN1-216ENST00000534042 CUX1P39880 1505 aa30.59■■■□□ 2.49
CAPRIN1-216ENST00000534042 CYB5RLQ6IPT4 315 aa30.58■■■□□ 2.49
CAPRIN1-216ENST00000534042 WDR97A6NE52 1622 aa30.55■■■□□ 2.48
CAPRIN1-216ENST00000534042 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.48
CAPRIN1-216ENST00000534042 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
CAPRIN1-216ENST00000534042 CHMP7Q8WUX9 453 aaPredicted RBP30.46■■■□□ 2.47
CAPRIN1-216ENST00000534042 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
CAPRIN1-216ENST00000534042 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
CAPRIN1-216ENST00000534042 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
CAPRIN1-216ENST00000534042 SYNJ1O43426 1573 aa30.36■■■□□ 2.45
CAPRIN1-216ENST00000534042 CLASP1Q7Z460 1538 aa30.35■■■□□ 2.45
CAPRIN1-216ENST00000534042 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
CAPRIN1-216ENST00000534042 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
CAPRIN1-216ENST00000534042 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
CAPRIN1-216ENST00000534042 ABCA10Q8WWZ4 1543 aa30.28■■■□□ 2.44
CAPRIN1-216ENST00000534042 TRHP20396 242 aaPredicted RBP30.26■■■□□ 2.43
CAPRIN1-216ENST00000534042 ABCA5Q8WWZ7 1642 aa30.22■■■□□ 2.43
CAPRIN1-216ENST00000534042 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
CAPRIN1-216ENST00000534042 TOP2BQ02880 1626 aa30.09■■■□□ 2.41
CAPRIN1-216ENST00000534042 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
CAPRIN1-216ENST00000534042 GRIN2AQ12879 1464 aa30.04■■■□□ 2.4
CAPRIN1-216ENST00000534042 ADAMTS12P58397 1594 aa30■■■□□ 2.39
CAPRIN1-216ENST00000534042 FHAD1B1AJZ9 1412 aa29.95■■■□□ 2.38
CAPRIN1-216ENST00000534042 NUP160Q12769 1436 aa29.94■■■□□ 2.38
CAPRIN1-216ENST00000534042 CEP170Q5SW79 1584 aa29.92■■■□□ 2.38
CAPRIN1-216ENST00000534042 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
CAPRIN1-216ENST00000534042 ERCC6L2Q5T890 1561 aa29.87■■■□□ 2.37
CAPRIN1-216ENST00000534042 SHROOM2Q13796 1616 aa29.79■■■□□ 2.36
CAPRIN1-216ENST00000534042 JPH4Q96JJ6 628 aa29.68■■■□□ 2.34
CAPRIN1-216ENST00000534042 PRG4Q92954 1404 aaPredicted RBP29.67■■■□□ 2.34
CAPRIN1-216ENST00000534042 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
CAPRIN1-216ENST00000534042 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms