RNA–Protein interactions for RNA: ENST00000599395.5

KHSRP-210, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-210ENST00000599395 NISCHQ9Y2I1 1504 aa31.81■■■□□ 2.68
KHSRP-210ENST00000599395 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
KHSRP-210ENST00000599395 ABCC9O60706 1549 aa27.65■■■□□ 2.02
KHSRP-210ENST00000599395 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
KHSRP-210ENST00000599395 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
KHSRP-210ENST00000599395 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
KHSRP-210ENST00000599395 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
KHSRP-210ENST00000599395 NACADO15069 1562 aa26.5■■□□□ 1.83
KHSRP-210ENST00000599395 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
KHSRP-210ENST00000599395 DCAF1Q9Y4B6 1507 aa26.45■■□□□ 1.83
KHSRP-210ENST00000599395 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
KHSRP-210ENST00000599395 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
KHSRP-210ENST00000599395 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
KHSRP-210ENST00000599395 DNAJC5Q9H3Z4 198 aa25.7■■□□□ 1.7
KHSRP-210ENST00000599395 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
KHSRP-210ENST00000599395 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
KHSRP-210ENST00000599395 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
KHSRP-210ENST00000599395 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
KHSRP-210ENST00000599395 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
KHSRP-210ENST00000599395 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
KHSRP-210ENST00000599395 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
KHSRP-210ENST00000599395 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
KHSRP-210ENST00000599395 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
KHSRP-210ENST00000599395 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
KHSRP-210ENST00000599395 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
KHSRP-210ENST00000599395 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
KHSRP-210ENST00000599395 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
KHSRP-210ENST00000599395 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
KHSRP-210ENST00000599395 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
KHSRP-210ENST00000599395 WIZO95785 1651 aa24.24■■□□□ 1.47
KHSRP-210ENST00000599395 CUX2O14529 1486 aa24.19■■□□□ 1.46
KHSRP-210ENST00000599395 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
KHSRP-210ENST00000599395 TOP2AP11388 1531 aaKnown RBP24.04■■□□□ 1.44
KHSRP-210ENST00000599395 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
KHSRP-210ENST00000599395 NESP48681 1621 aa23.92■■□□□ 1.42
KHSRP-210ENST00000599395 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
KHSRP-210ENST00000599395 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
KHSRP-210ENST00000599395 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
KHSRP-210ENST00000599395 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
KHSRP-210ENST00000599395 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
KHSRP-210ENST00000599395 CFTRP13569 1480 aa23.63■■□□□ 1.37
KHSRP-210ENST00000599395 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
KHSRP-210ENST00000599395 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
KHSRP-210ENST00000599395 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
KHSRP-210ENST00000599395 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
KHSRP-210ENST00000599395 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
KHSRP-210ENST00000599395 THOC2Q8NI27 1593 aaKnown RBP23.43■■□□□ 1.34
KHSRP-210ENST00000599395 WDR62O43379 1518 aa23.3■■□□□ 1.32
KHSRP-210ENST00000599395 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
KHSRP-210ENST00000599395 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
KHSRP-210ENST00000599395 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
KHSRP-210ENST00000599395 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
KHSRP-210ENST00000599395 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
KHSRP-210ENST00000599395 CUX1P39880 1505 aa22.98■■□□□ 1.27
KHSRP-210ENST00000599395 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
KHSRP-210ENST00000599395 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
KHSRP-210ENST00000599395 SOGA1O94964 1423 aa22.93■■□□□ 1.26
KHSRP-210ENST00000599395 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
KHSRP-210ENST00000599395 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
KHSRP-210ENST00000599395 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
KHSRP-210ENST00000599395 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
KHSRP-210ENST00000599395 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
KHSRP-210ENST00000599395 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
KHSRP-210ENST00000599395 RIMBP3CA6NJZ7 1639 aa22.83■■□□□ 1.25
KHSRP-210ENST00000599395 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.25
KHSRP-210ENST00000599395 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
KHSRP-210ENST00000599395 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.25
KHSRP-210ENST00000599395 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
KHSRP-210ENST00000599395 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.247e-8■■■■■ 26.8
KHSRP-210ENST00000599395 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
KHSRP-210ENST00000599395 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
KHSRP-210ENST00000599395 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
KHSRP-210ENST00000599395 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
KHSRP-210ENST00000599395 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
KHSRP-210ENST00000599395 FBLN2P98095 1184 aa22.68■■□□□ 1.22
KHSRP-210ENST00000599395 TRHP20396 242 aaPredicted RBP22.65■■□□□ 1.22
KHSRP-210ENST00000599395 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
KHSRP-210ENST00000599395 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
KHSRP-210ENST00000599395 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
KHSRP-210ENST00000599395 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
KHSRP-210ENST00000599395 SNAPC4Q5SXM2 1469 aa22.57■■□□□ 1.2
KHSRP-210ENST00000599395 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
KHSRP-210ENST00000599395 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
KHSRP-210ENST00000599395 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
KHSRP-210ENST00000599395 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
KHSRP-210ENST00000599395 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
KHSRP-210ENST00000599395 CHD1O14646 1710 aa22.45■■□□□ 1.19
KHSRP-210ENST00000599395 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
KHSRP-210ENST00000599395 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
KHSRP-210ENST00000599395 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
KHSRP-210ENST00000599395 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
KHSRP-210ENST00000599395 IGF1RP08069 1367 aa22.34■■□□□ 1.17
KHSRP-210ENST00000599395 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
KHSRP-210ENST00000599395 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
KHSRP-210ENST00000599395 CUL7Q14999 1698 aa22.3■■□□□ 1.16
KHSRP-210ENST00000599395 ILDR1Q86SU0 546 aaPredicted RBP22.29■■□□□ 1.16
KHSRP-210ENST00000599395 EEA1Q15075 1411 aa22.29■■□□□ 1.16
KHSRP-210ENST00000599395 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
KHSRP-210ENST00000599395 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
KHSRP-210ENST00000599395 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms