RNA–Protein interactions for RNA: ENST00000530633.1

GPAA1-214, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 835 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-214ENST00000530633 NISCHQ9Y2I1 1504 aa48.86■■■■■ 5.41
GPAA1-214ENST00000530633 ABCC9O60706 1549 aa43.88■■■■■ 4.61
GPAA1-214ENST00000530633 CCDC180Q9P1Z9 1646 aa43.79■■■■■ 4.6
GPAA1-214ENST00000530633 RB1CC1Q8TDY2 1594 aa41.73■■■■■ 4.27
GPAA1-214ENST00000530633 NACADO15069 1562 aa41.43■■■■■ 4.22
GPAA1-214ENST00000530633 DCAF8L2P0C7V8 631 aa41.4■■■■■ 4.22
GPAA1-214ENST00000530633 DNAJC5BQ9UF47 199 aa41.15■■■■■ 4.18
GPAA1-214ENST00000530633 PABPN1Q86U42 306 aaKnown RBP eCLIP40.89■■■■■ 4.14
GPAA1-214ENST00000530633 MYO15BQ96JP2 1530 aa40.83■■■■■ 4.13
GPAA1-214ENST00000530633 UNC13AQ9UPW8 1703 aa40.72■■■■■ 4.11
GPAA1-214ENST00000530633 BICRAQ9NZM4 1560 aa40.48■■■■■ 4.07
GPAA1-214ENST00000530633 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
GPAA1-214ENST00000530633 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
GPAA1-214ENST00000530633 SCRIBQ14160 1630 aa39.96■■■■□ 3.99
GPAA1-214ENST00000530633 SHROOM4Q9ULL8 1493 aa39.93■■■■□ 3.98
GPAA1-214ENST00000530633 CC2D2AQ9P2K1 1620 aa39.59■■■■□ 3.93
GPAA1-214ENST00000530633 CECR2Q9BXF3 1484 aa39.51■■■■□ 3.92
GPAA1-214ENST00000530633 EIF4G1Q04637 1599 aaKnown RBP39.5■■■■□ 3.91
GPAA1-214ENST00000530633 NCAPD3P42695 1498 aa38.26■■■■□ 3.72
GPAA1-214ENST00000530633 ATAD2BQ9ULI0 1458 aa38.15■■■■□ 3.7
GPAA1-214ENST00000530633 SMARCA4P51532 1647 aa38.09■■■■□ 3.69
GPAA1-214ENST00000530633 SMARCA2P51531 1590 aa38.05■■■■□ 3.68
GPAA1-214ENST00000530633 HMGXB3Q12766 1538 aa37.95■■■■□ 3.67
GPAA1-214ENST00000530633 BAZ1AQ9NRL2 1556 aaPredicted RBP37.93■■■■□ 3.66
GPAA1-214ENST00000530633 ERCC6Q03468 1493 aa37.9■■■■□ 3.66
GPAA1-214ENST00000530633 BAZ1BQ9UIG0 1483 aaKnown RBP37.8■■■■□ 3.64
GPAA1-214ENST00000530633 DNAJC5Q9H3Z4 198 aa37.79■■■■□ 3.64
GPAA1-214ENST00000530633 CUX2O14529 1486 aa37.77■■■■□ 3.64
GPAA1-214ENST00000530633 PEG3Q9GZU2 1588 aa37.69■■■■□ 3.62
GPAA1-214ENST00000530633 NESP48681 1621 aa37.67■■■■□ 3.62
GPAA1-214ENST00000530633 MROH2BQ7Z745 1585 aa37.65■■■■□ 3.62
GPAA1-214ENST00000530633 LAMC3Q9Y6N6 1575 aa37.39■■■■□ 3.58
GPAA1-214ENST00000530633 THOC2Q8NI27 1593 aaKnown RBP37.24■■■■□ 3.55
GPAA1-214ENST00000530633 PDS5BQ9NTI5 1447 aa37.22■■■■□ 3.55
GPAA1-214ENST00000530633 WIZO95785 1651 aa37.2■■■■□ 3.55
GPAA1-214ENST00000530633 KIF21AQ7Z4S6 1674 aa37.15■■■■□ 3.54
GPAA1-214ENST00000530633 CADPSQ9ULU8 1353 aa37.13■■■■□ 3.53
GPAA1-214ENST00000530633 RSF1Q96T23 1441 aaPredicted RBP36.88■■■■□ 3.49
GPAA1-214ENST00000530633 MRC2Q9UBG0 1479 aa36.87■■■■□ 3.49
GPAA1-214ENST00000530633 WDR62O43379 1518 aa36.75■■■■□ 3.47
GPAA1-214ENST00000530633 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
GPAA1-214ENST00000530633 TOP2AP11388 1531 aaKnown RBP36.72■■■■□ 3.47
GPAA1-214ENST00000530633 FANCD2Q9BXW9 1451 aa36.7■■■■□ 3.47
GPAA1-214ENST00000530633 CFTRP13569 1480 aa36.68■■■■□ 3.46
GPAA1-214ENST00000530633 URB2Q14146 1524 aaKnown RBP36.38■■■■□ 3.41
GPAA1-214ENST00000530633 CCDC88BA6NC98 1476 aa36.34■■■■□ 3.41
GPAA1-214ENST00000530633 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
GPAA1-214ENST00000530633 TRIM41Q8WV44 630 aa36.21■■■■□ 3.39
GPAA1-214ENST00000530633 OSCARQ8IYS5 282 aa36.13■■■■□ 3.37
GPAA1-214ENST00000530633 IFT140Q96RY7 1462 aa36■■■■□ 3.35
GPAA1-214ENST00000530633 TOPBP1Q92547 1522 aa35.99■■■■□ 3.35
GPAA1-214ENST00000530633 ZNF608Q9ULD9 1512 aaPredicted RBP35.94■■■■□ 3.34
GPAA1-214ENST00000530633 ABCC8Q09428 1581 aa35.93■■■■□ 3.34
GPAA1-214ENST00000530633 DNMBPQ6XZF7 1577 aa35.85■■■■□ 3.33
GPAA1-214ENST00000530633 EIF4G3O43432 1585 aaKnown RBP35.72■■■■□ 3.31
GPAA1-214ENST00000530633 AQRO60306 1485 aaKnown RBP eCLIP35.65■■■■□ 3.33e-10■■■■■ 43.6
GPAA1-214ENST00000530633 TARBP1Q13395 1621 aaKnown RBP35.64■■■■□ 3.3
GPAA1-214ENST00000530633 POLA1P09884 1462 aaPredicted RBP35.62■■■■□ 3.29
GPAA1-214ENST00000530633 RIMBP3CA6NJZ7 1639 aa35.58■■■■□ 3.29
GPAA1-214ENST00000530633 RIMBP3BA6NNM3 1639 aa35.58■■■■□ 3.29
GPAA1-214ENST00000530633 RIMBP3Q9UFD9 1639 aa35.58■■■■□ 3.29
GPAA1-214ENST00000530633 RAD54L2Q9Y4B4 1467 aa35.52■■■■□ 3.28
GPAA1-214ENST00000530633 SOGA1O94964 1423 aa35.51■■■■□ 3.28
GPAA1-214ENST00000530633 FBLN2P98095 1184 aa35.5■■■■□ 3.27
GPAA1-214ENST00000530633 ARHGEF11O15085 1522 aa35.47■■■■□ 3.27
GPAA1-214ENST00000530633 TDRD9Q8NDG6 1382 aaKnown RBP35.45■■■■□ 3.27
GPAA1-214ENST00000530633 CHD1O14646 1710 aa35.44■■■■□ 3.26
GPAA1-214ENST00000530633 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
GPAA1-214ENST00000530633 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
GPAA1-214ENST00000530633 CUX1P39880 1505 aa35.37■■■■□ 3.25
GPAA1-214ENST00000530633 CYB5RLQ6IPT4 315 aa35.31■■■■□ 3.24
GPAA1-214ENST00000530633 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
GPAA1-214ENST00000530633 SNAPC4Q5SXM2 1469 aa35.27■■■■□ 3.24
GPAA1-214ENST00000530633 CHMP7Q8WUX9 453 aaPredicted RBP35.21■■■■□ 3.23
GPAA1-214ENST00000530633 GRIN2BQ13224 1484 aa35.17■■■■□ 3.22
GPAA1-214ENST00000530633 MAGI1Q96QZ7 1491 aaPredicted RBP35.16■■■■□ 3.22
GPAA1-214ENST00000530633 ARAP1Q96P48 1450 aa35.13■■■■□ 3.21
GPAA1-214ENST00000530633 SYNJ1O43426 1573 aa35.05■■■■□ 3.2
GPAA1-214ENST00000530633 SYNJ2O15056 1496 aa35.05■■■■□ 3.2
GPAA1-214ENST00000530633 GAPVD1Q14C86 1478 aa35.05■■■■□ 3.2
GPAA1-214ENST00000530633 CLASP1Q7Z460 1538 aa35.03■■■■□ 3.2
GPAA1-214ENST00000530633 ABCA10Q8WWZ4 1543 aa35■■■■□ 3.19
GPAA1-214ENST00000530633 PBRM1Q86U86 1689 aa34.99■■■■□ 3.19
GPAA1-214ENST00000530633 TRHP20396 242 aaPredicted RBP34.95■■■■□ 3.19
GPAA1-214ENST00000530633 ABCA5Q8WWZ7 1642 aa34.92■■■■□ 3.18
GPAA1-214ENST00000530633 WRNQ14191 1432 aaPredicted RBP eCLIP34.9■■■■□ 3.18
GPAA1-214ENST00000530633 TOP2BQ02880 1626 aa34.8■■■■□ 3.16
GPAA1-214ENST00000530633 BIVM-ERCC5R4GMW8 1640 aa34.78■■■■□ 3.16
GPAA1-214ENST00000530633 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
GPAA1-214ENST00000530633 ADAMTS12P58397 1594 aa34.66■■■■□ 3.14
GPAA1-214ENST00000530633 FHAD1B1AJZ9 1412 aa34.61■■■■□ 3.13
GPAA1-214ENST00000530633 NUP160Q12769 1436 aa34.57■■■■□ 3.13
GPAA1-214ENST00000530633 CEP170Q5SW79 1584 aa34.57■■■■□ 3.12
GPAA1-214ENST00000530633 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
GPAA1-214ENST00000530633 ERCC6L2Q5T890 1561 aa34.51■■■■□ 3.12
GPAA1-214ENST00000530633 SHROOM2Q13796 1616 aa34.4■■■■□ 3.1
GPAA1-214ENST00000530633 JPH4Q96JJ6 628 aa34.3■■■■□ 3.08
GPAA1-214ENST00000530633 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
GPAA1-214ENST00000530633 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
GPAA1-214ENST00000530633 RUSC2Q8N2Y8 1516 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms