RNA–Protein interactions for RNA: ENST00000524418.5

GPAA1-203, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-203ENST00000524418 NISCHQ9Y2I1 1504 aa39.95■■■■□ 3.99
GPAA1-203ENST00000524418 CCDC180Q9P1Z9 1646 aa35.74■■■■□ 3.31
GPAA1-203ENST00000524418 ABCC9O60706 1549 aa35.62■■■■□ 3.29
GPAA1-203ENST00000524418 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
GPAA1-203ENST00000524418 DCAF8L2P0C7V8 631 aa33.78■■■■□ 3
GPAA1-203ENST00000524418 NACADO15069 1562 aa33.75■■■□□ 2.99
GPAA1-203ENST00000524418 MYO15BQ96JP2 1530 aa33.29■■■□□ 2.92
GPAA1-203ENST00000524418 PABPN1Q86U42 306 aaKnown RBP eCLIP33.22■■■□□ 2.91
GPAA1-203ENST00000524418 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
GPAA1-203ENST00000524418 UNC13AQ9UPW8 1703 aa33.18■■■□□ 2.9
GPAA1-203ENST00000524418 ZCCHC6Q5VYS8 1495 aaKnown RBP33.13■■■□□ 2.89
GPAA1-203ENST00000524418 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
GPAA1-203ENST00000524418 BICRAQ9NZM4 1560 aa32.92■■■□□ 2.86
GPAA1-203ENST00000524418 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
GPAA1-203ENST00000524418 SHROOM4Q9ULL8 1493 aa32.47■■■□□ 2.79
GPAA1-203ENST00000524418 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
GPAA1-203ENST00000524418 EIF4G1Q04637 1599 aaKnown RBP32.12■■■□□ 2.73
GPAA1-203ENST00000524418 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
GPAA1-203ENST00000524418 NCAPD3P42695 1498 aa31.14■■■□□ 2.58
GPAA1-203ENST00000524418 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
GPAA1-203ENST00000524418 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
GPAA1-203ENST00000524418 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
GPAA1-203ENST00000524418 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
GPAA1-203ENST00000524418 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
GPAA1-203ENST00000524418 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
GPAA1-203ENST00000524418 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
GPAA1-203ENST00000524418 PEG3Q9GZU2 1588 aa30.77■■■□□ 2.52
GPAA1-203ENST00000524418 ERCC6Q03468 1493 aa30.76■■■□□ 2.51
GPAA1-203ENST00000524418 NESP48681 1621 aa30.64■■■□□ 2.5
GPAA1-203ENST00000524418 CUX2O14529 1486 aa30.56■■■□□ 2.48
GPAA1-203ENST00000524418 WIZO95785 1651 aa30.46■■■□□ 2.47
GPAA1-203ENST00000524418 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
GPAA1-203ENST00000524418 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
GPAA1-203ENST00000524418 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
GPAA1-203ENST00000524418 THOC2Q8NI27 1593 aaKnown RBP30.25■■■□□ 2.43
GPAA1-203ENST00000524418 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
GPAA1-203ENST00000524418 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
GPAA1-203ENST00000524418 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
GPAA1-203ENST00000524418 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
GPAA1-203ENST00000524418 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
GPAA1-203ENST00000524418 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
GPAA1-203ENST00000524418 CFTRP13569 1480 aa29.92■■■□□ 2.38
GPAA1-203ENST00000524418 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
GPAA1-203ENST00000524418 WDR62O43379 1518 aa29.88■■■□□ 2.37
GPAA1-203ENST00000524418 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
GPAA1-203ENST00000524418 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
GPAA1-203ENST00000524418 URB2Q14146 1524 aaKnown RBP29.63■■■□□ 2.33
GPAA1-203ENST00000524418 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
GPAA1-203ENST00000524418 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
GPAA1-203ENST00000524418 IFT140Q96RY7 1462 aa29.29■■■□□ 2.28
GPAA1-203ENST00000524418 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
GPAA1-203ENST00000524418 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.27
GPAA1-203ENST00000524418 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
GPAA1-203ENST00000524418 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
GPAA1-203ENST00000524418 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
GPAA1-203ENST00000524418 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
GPAA1-203ENST00000524418 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
GPAA1-203ENST00000524418 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
GPAA1-203ENST00000524418 AQRO60306 1485 aaKnown RBP eCLIP29.03■■■□□ 2.243e-10■■■■■ 43.6
GPAA1-203ENST00000524418 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
GPAA1-203ENST00000524418 SOGA1O94964 1423 aa28.97■■■□□ 2.23
GPAA1-203ENST00000524418 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
GPAA1-203ENST00000524418 CUX1P39880 1505 aa28.92■■■□□ 2.22
GPAA1-203ENST00000524418 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
GPAA1-203ENST00000524418 FBLN2P98095 1184 aa28.88■■■□□ 2.21
GPAA1-203ENST00000524418 CHD1O14646 1710 aa28.86■■■□□ 2.21
GPAA1-203ENST00000524418 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
GPAA1-203ENST00000524418 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
GPAA1-203ENST00000524418 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
GPAA1-203ENST00000524418 WDR97A6NE52 1622 aa28.76■■■□□ 2.19
GPAA1-203ENST00000524418 ARHGEF11O15085 1522 aa28.75■■■□□ 2.19
GPAA1-203ENST00000524418 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
GPAA1-203ENST00000524418 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
GPAA1-203ENST00000524418 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
GPAA1-203ENST00000524418 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
GPAA1-203ENST00000524418 GAPVD1Q14C86 1478 aa28.6■■■□□ 2.17
GPAA1-203ENST00000524418 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
GPAA1-203ENST00000524418 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
GPAA1-203ENST00000524418 PBRM1Q86U86 1689 aa28.58■■■□□ 2.17
GPAA1-203ENST00000524418 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
GPAA1-203ENST00000524418 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
GPAA1-203ENST00000524418 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
GPAA1-203ENST00000524418 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
GPAA1-203ENST00000524418 TOP2BQ02880 1626 aa28.51■■■□□ 2.15
GPAA1-203ENST00000524418 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
GPAA1-203ENST00000524418 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
GPAA1-203ENST00000524418 ARAP1Q96P48 1450 aa28.48■■■□□ 2.15
GPAA1-203ENST00000524418 ADAMTS12P58397 1594 aa28.3■■■□□ 2.12
GPAA1-203ENST00000524418 GRIN2AQ12879 1464 aa28.3■■■□□ 2.12
GPAA1-203ENST00000524418 TRHP20396 242 aaPredicted RBP28.25■■■□□ 2.11
GPAA1-203ENST00000524418 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
GPAA1-203ENST00000524418 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
GPAA1-203ENST00000524418 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
GPAA1-203ENST00000524418 NUP160Q12769 1436 aa28.17■■■□□ 2.1
GPAA1-203ENST00000524418 ERCC6L2Q5T890 1561 aa28.09■■■□□ 2.09
GPAA1-203ENST00000524418 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
GPAA1-203ENST00000524418 KIF27Q86VH2 1401 aa27.99■■■□□ 2.07
GPAA1-203ENST00000524418 JPH4Q96JJ6 628 aa27.94■■■□□ 2.06
GPAA1-203ENST00000524418 IGF1RP08069 1367 aa27.94■■■□□ 2.06
GPAA1-203ENST00000524418 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms