Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.437e-8■■■■□ 22.1
FTOQ9C0B1 HNRNPU-214ENST00000638475 2698 ntTSL 516.9■□□□□ 0.37e-8■■■■□ 22.1
FTOQ9C0B1 HNRNPU-229ENST00000640440 871 ntTSL 316.54■□□□□ 0.243e-11■■■■□ 22.1
FTOQ9C0B1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.157e-8■■■■□ 22.1
FTOQ9C0B1 HNRNPU-224ENST00000640056 2045 ntTSL 511.63□□□□□ -0.557e-8■■■■□ 22.1
FTOQ9C0B1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.793e-6■■■■□ 22
FTOQ9C0B1 TFRC-204ENST00000421258 524 ntTSL 315.37■□□□□ 0.053e-6■■■■□ 22
FTOQ9C0B1 TFRC-208ENST00000464011 546 ntTSL 412.76□□□□□ -0.373e-6■■■■□ 22
FTOQ9C0B1 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.733e-6■■■■□ 22
FTOQ9C0B1 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.933e-6■■■■□ 22
FTOQ9C0B1 MXI1-207ENST00000453116 803 ntTSL 528.15■■■□□ 2.13e-6■■■■□ 22
FTOQ9C0B1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.683e-6■■■■□ 22
FTOQ9C0B1 RANBP1-214ENST00000488484 699 ntTSL 217.33■□□□□ 0.364e-8■■■■□ 21.8
FTOQ9C0B1 RANBP1-209ENST00000432879 744 ntTSL 316.22■□□□□ 0.198e-8■■■■□ 21.8
FTOQ9C0B1 CTBP1-214ENST00000514495 564 ntTSL 231.84■■■□□ 2.691e-6■■■■□ 21.7
FTOQ9C0B1 CTBP1-217ENST00000515399 985 ntTSL 322.19■■□□□ 1.141e-6■■■■□ 21.7
FTOQ9C0B1 CTBP1-212ENST00000513420 704 ntTSL 317.08■□□□□ 0.321e-6■■■■□ 21.7
FTOQ9C0B1 CTBP1-213ENST00000514210 856 ntTSL 216.91■□□□□ 0.31e-6■■■■□ 21.7
FTOQ9C0B1 SLC16A3-218ENST00000583444 2882 nt22.72■■□□□ 1.233e-7■■■■□ 21.7
FTOQ9C0B1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.052e-13■■■■□ 21.7
FTOQ9C0B1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.9■■■□□ 2.72e-13■■■■□ 21.7
FTOQ9C0B1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.242e-13■■■■□ 21.7
FTOQ9C0B1 RETREG3-204ENST00000586796 576 ntTSL 224.07■■□□□ 1.445e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-202ENST00000585726 522 ntTSL 424.07■■□□□ 1.445e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-205ENST00000586870 1632 ntTSL 221.31■■□□□ 15e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-210ENST00000590541 409 ntTSL 420.52■□□□□ 0.885e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-212ENST00000593251 565 ntTSL 420.48■□□□□ 0.875e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-206ENST00000588423 559 ntTSL 418.11■□□□□ 0.495e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-208ENST00000589797 4149 ntTSL 216.88■□□□□ 0.295e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.035e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC14.22□□□□□ -0.135e-9■■■■□ 21.6
FTOQ9C0B1 RETREG3-211ENST00000591547 564 ntTSL 411.67□□□□□ -0.545e-9■■■■□ 21.6
FTOQ9C0B1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-10■■■■□ 21.5
FTOQ9C0B1 PTMA-206ENST00000412128 863 ntTSL 328.21■■■□□ 2.113e-11■■■■□ 21.5
FTOQ9C0B1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.32■■□□□ 1.643e-11■■■■□ 21.5
FTOQ9C0B1 CBFA2T3-207ENST00000564416 399 ntTSL 517.61■□□□□ 0.414e-6■■■■□ 21.5
FTOQ9C0B1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.224e-6■■■■□ 21.5
FTOQ9C0B1 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)15.68■□□□□ 0.14e-6■■■■□ 21.5
FTOQ9C0B1 CBFA2T3-209ENST00000569443 469 ntTSL 514.39□□□□□ -0.114e-6■■■■□ 21.5
FTOQ9C0B1 PTMA-208ENST00000448874 1108 ntTSL 219.3■□□□□ 0.682e-11■■■■□ 21.4
FTOQ9C0B1 PTMA-212ENST00000481928 1635 ntTSL 319.01■□□□□ 0.632e-11■■■■□ 21.4
FTOQ9C0B1 PTMA-209ENST00000466801 784 ntTSL 512.64□□□□□ -0.392e-11■■■■□ 21.4
FTOQ9C0B1 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.452e-11■■■■□ 21.4
FTOQ9C0B1 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.52e-11■■■■□ 21.4
FTOQ9C0B1 PTMA-203ENST00000409321 735 ntTSL 3 BASIC11.76□□□□□ -0.532e-11■■■■□ 21.4
FTOQ9C0B1 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.622e-11■■■■□ 21.4
FTOQ9C0B1 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.05■□□□□ 08e-7■■■■□ 21.4
FTOQ9C0B1 TMC6-204ENST00000585849 552 ntTSL 222.18■■□□□ 1.149e-8■■■■□ 21.4
FTOQ9C0B1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.049e-8■■■■□ 21.4
FTOQ9C0B1 TMC6-222ENST00000592076 693 ntTSL 318.5■□□□□ 0.559e-8■■■■□ 21.4
FTOQ9C0B1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.023e-6■■■■□ 21.3
FTOQ9C0B1 PIP5K1C-208ENST00000637724 435 ntTSL 323.32■■□□□ 1.323e-6■■■■□ 21.3
FTOQ9C0B1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.023e-6■■■■□ 21.3
FTOQ9C0B1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.863e-6■■■■□ 21.3
FTOQ9C0B1 PIP5K1C-204ENST00000587482 1311 ntTSL 518.39■□□□□ 0.533e-6■■■■□ 21.3
FTOQ9C0B1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.473e-6■■■■□ 21.3
FTOQ9C0B1 ABHD17A-206ENST00000592757 740 ntTSL 322.6■■□□□ 1.213e-8■■■■□ 21.3
FTOQ9C0B1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.873e-8■■■■□ 21.3
FTOQ9C0B1 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.083e-8■■■■□ 21.3
FTOQ9C0B1 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.083e-8■■■■□ 21.3
FTOQ9C0B1 AGPAT3-207ENST00000445582 582 ntTSL 314.32□□□□□ -0.123e-8■■■■□ 21.3
FTOQ9C0B1 AGPAT3-208ENST00000448287 454 ntTSL 313.99□□□□□ -0.173e-8■■■■□ 21.3
FTOQ9C0B1 CANX-205ENST00000502673 1000 ntTSL 513.26□□□□□ -0.297e-22■■■■□ 21.2
FTOQ9C0B1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.19■■□□□ 1.463e-8■■■■□ 21
FTOQ9C0B1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.83e-8■■■■□ 21
FTOQ9C0B1 SQLE-205ENST00000521232 711 ntTSL 319.5■□□□□ 0.713e-8■■■■□ 21
FTOQ9C0B1 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.893e-6■■■■□ 21
FTOQ9C0B1 GSE1-216ENST00000637419 2683 ntTSL 523.6■■□□□ 1.374e-7■■■■□ 21
FTOQ9C0B1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.62■■■□□ 2.332e-6■■■■□ 20.9
FTOQ9C0B1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.92e-6■■■■□ 20.9
FTOQ9C0B1 CTBP1-208ENST00000506180 843 ntTSL 521.21■□□□□ 0.992e-6■■■■□ 20.9
FTOQ9C0B1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.26■□□□□ 0.515e-7■■■■□ 20.9
FTOQ9C0B1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.728e-10■■■■□ 20.8
FTOQ9C0B1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.445e-7■■■■□ 20.7
FTOQ9C0B1 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.182e-12■■■■□ 20.7
FTOQ9C0B1 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.34■□□□□ 0.052e-12■■■■□ 20.7
FTOQ9C0B1 STIM1-204ENST00000525403 625 ntTSL 48.44□□□□□ -1.062e-12■■■■□ 20.7
FTOQ9C0B1 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -03e-7■■■■□ 20.6
FTOQ9C0B1 SMIM15-201ENST00000339020 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.143e-7■■■■□ 20.6
FTOQ9C0B1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.046e-8■■■■□ 20.6
FTOQ9C0B1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.21e-8■■■■□ 20.6
FTOQ9C0B1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.861e-8■■■■□ 20.6
FTOQ9C0B1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.575e-6■■■■□ 20.6
FTOQ9C0B1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.127e-7■■■■□ 20.6
FTOQ9C0B1 PTMA-211ENST00000468027 621 ntTSL 1 (best)14.64□□□□□ -0.073e-11■■■■□ 20.6
FTOQ9C0B1 GRB2-207ENST00000577711 555 ntTSL 223.4■■□□□ 1.343e-12■■■■□ 20.5
FTOQ9C0B1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.63e-12■■■■□ 20.5
FTOQ9C0B1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.11■□□□□ 0.493e-12■■■■□ 20.5
FTOQ9C0B1 AC092384.3-202ENST00000564646 2873 ntBASIC18.75■□□□□ 0.597e-6■■■■□ 20.4
FTOQ9C0B1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.049e-10■■■■□ 20.4
FTOQ9C0B1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.789e-10■■■■□ 20.4
FTOQ9C0B1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.749e-10■■■■□ 20.4
FTOQ9C0B1 SLC39A7-204ENST00000463972 1410 ntTSL 215.51■□□□□ 0.079e-10■■■■□ 20.4
FTOQ9C0B1 HYOU1-208ENST00000531682 319 ntTSL 213.51□□□□□ -0.259e-10■■■■□ 20.4
FTOQ9C0B1 SLC39A7-203ENST00000444757 1015 ntTSL 512.94□□□□□ -0.349e-10■■■■□ 20.4
FTOQ9C0B1 GPT2-203ENST00000562132 554 ntTSL 417.01■□□□□ 0.312e-6■■■■□ 20.4
FTOQ9C0B1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.94■■■□□ 2.063e-6■■■■□ 20.3
FTOQ9C0B1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.87■■□□□ 1.253e-6■■■■□ 20.3
FTOQ9C0B1 DVL1-203ENST00000472445 639 ntTSL 220.8■□□□□ 0.923e-6■■■■□ 20.3
FTOQ9C0B1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.723e-6■■■■□ 20.3
Retrieved 100 of 7,068 protein–RNA pairs in 94 ms