RNA–Protein interactions for RNA: ENST00000616714.4

STIM1-220, Transcript of stromal interaction molecule 1, humanhuman

TSL 1 (best) BASIC

Gene STIM1, Length 4,356 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIM1-220ENST00000616714 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
STIM1-220ENST00000616714 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
STIM1-220ENST00000616714 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
STIM1-220ENST00000616714 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
STIM1-220ENST00000616714 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
STIM1-220ENST00000616714 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.03
STIM1-220ENST00000616714 ZEB1P37275 1124 aaPredicted RBP21.45■■□□□ 1.02
STIM1-220ENST00000616714 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
STIM1-220ENST00000616714 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
STIM1-220ENST00000616714 APLP2Q06481 763 aa21.35■■□□□ 1.01
STIM1-220ENST00000616714 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
STIM1-220ENST00000616714 HRCP23327 699 aa21.19■□□□□ 0.98
STIM1-220ENST00000616714 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
STIM1-220ENST00000616714 TRIM26Q12899 539 aaPredicted RBP21.04■□□□□ 0.96
STIM1-220ENST00000616714 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
STIM1-220ENST00000616714 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
STIM1-220ENST00000616714 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
STIM1-220ENST00000616714 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.92
STIM1-220ENST00000616714 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
STIM1-220ENST00000616714 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
STIM1-220ENST00000616714 RANGAP1P46060 587 aaPredicted RBP20.57■□□□□ 0.88
STIM1-220ENST00000616714 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
STIM1-220ENST00000616714 MYT1Q01538 1121 aa20.41■□□□□ 0.86
STIM1-220ENST00000616714 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
STIM1-220ENST00000616714 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
STIM1-220ENST00000616714 NEFLP07196 543 aa20.23■□□□□ 0.83
STIM1-220ENST00000616714 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
STIM1-220ENST00000616714 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
STIM1-220ENST00000616714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
STIM1-220ENST00000616714 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
STIM1-220ENST00000616714 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
STIM1-220ENST00000616714 ABCC9O60706 1549 aa20.1■□□□□ 0.81
STIM1-220ENST00000616714 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
STIM1-220ENST00000616714 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
STIM1-220ENST00000616714 ITGAEP38570 1179 aa19.95■□□□□ 0.78
STIM1-220ENST00000616714 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
STIM1-220ENST00000616714 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
STIM1-220ENST00000616714 ZNF316A6NFI3 1004 aaPredicted RBP19.77■□□□□ 0.76
STIM1-220ENST00000616714 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
STIM1-220ENST00000616714 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
STIM1-220ENST00000616714 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
STIM1-220ENST00000616714 FAM50AQ14320 339 aaKnown RBP19.61■□□□□ 0.73
STIM1-220ENST00000616714 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
STIM1-220ENST00000616714 POLR3GLQ9BT43 218 aa19.45■□□□□ 0.7
STIM1-220ENST00000616714 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
STIM1-220ENST00000616714 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
STIM1-220ENST00000616714 EEA1Q15075 1411 aa19.44■□□□□ 0.7
STIM1-220ENST00000616714 ANP32CO43423 234 aa19.43■□□□□ 0.7
STIM1-220ENST00000616714 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
STIM1-220ENST00000616714 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
STIM1-220ENST00000616714 NACADO15069 1562 aa19.36■□□□□ 0.69
STIM1-220ENST00000616714 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
STIM1-220ENST00000616714 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
STIM1-220ENST00000616714 CLIP1P30622 1438 aa19.25■□□□□ 0.67
STIM1-220ENST00000616714 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
STIM1-220ENST00000616714 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
STIM1-220ENST00000616714 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
STIM1-220ENST00000616714 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
STIM1-220ENST00000616714 MYT1LQ9UL68 1186 aa19.18■□□□□ 0.66
STIM1-220ENST00000616714 BCANQ96GW7 911 aa19.18■□□□□ 0.66
STIM1-220ENST00000616714 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
STIM1-220ENST00000616714 P3H3Q8IVL6 736 aa19.17■□□□□ 0.66
STIM1-220ENST00000616714 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
STIM1-220ENST00000616714 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
STIM1-220ENST00000616714 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
STIM1-220ENST00000616714 MIER1Q8N108 512 aa19.11■□□□□ 0.65
STIM1-220ENST00000616714 TONSLQ96HA7 1378 aa19.1■□□□□ 0.65
STIM1-220ENST00000616714 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
STIM1-220ENST00000616714 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
STIM1-220ENST00000616714 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
STIM1-220ENST00000616714 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
STIM1-220ENST00000616714 FKBP8Q14318 412 aa18.95■□□□□ 0.62
STIM1-220ENST00000616714 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
STIM1-220ENST00000616714 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
STIM1-220ENST00000616714 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
STIM1-220ENST00000616714 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
STIM1-220ENST00000616714 SOGA1O94964 1423 aa18.87■□□□□ 0.61
STIM1-220ENST00000616714 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
STIM1-220ENST00000616714 FBLN2P98095 1184 aa18.86■□□□□ 0.61
STIM1-220ENST00000616714 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
STIM1-220ENST00000616714 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
STIM1-220ENST00000616714 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
STIM1-220ENST00000616714 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
STIM1-220ENST00000616714 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
STIM1-220ENST00000616714 VPS8Q8N3P4 1428 aa18.76■□□□□ 0.59
STIM1-220ENST00000616714 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
STIM1-220ENST00000616714 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
STIM1-220ENST00000616714 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
STIM1-220ENST00000616714 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
STIM1-220ENST00000616714 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
STIM1-220ENST00000616714 CCNB3Q8WWL7 1395 aa18.69■□□□□ 0.58
STIM1-220ENST00000616714 WIZO95785 1651 aa18.69■□□□□ 0.58
STIM1-220ENST00000616714 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
STIM1-220ENST00000616714 MRS2Q9HD23 443 aa18.66■□□□□ 0.58
STIM1-220ENST00000616714 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
STIM1-220ENST00000616714 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
STIM1-220ENST00000616714 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
STIM1-220ENST00000616714 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
STIM1-220ENST00000616714 CANXP27824 592 aaKnown RBP18.6■□□□□ 0.57
STIM1-220ENST00000616714 HIRIP3Q9BW71 556 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms