Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.13□□□□□ -1.591e-6■■■□□ 14.6
MATR3P43243 CELF1-213ENST00000530151 583 ntTSL 323.85■■□□□ 1.413e-9■■■□□ 14.6
MATR3P43243 CELF1-210ENST00000526419 476 ntTSL 420.08■□□□□ 0.813e-9■■■□□ 14.6
MATR3P43243 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.183e-9■■■□□ 14.6
MATR3P43243 CELF1-208ENST00000525841 622 ntTSL 516.14■□□□□ 0.173e-9■■■□□ 14.6
MATR3P43243 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.89■□□□□ 0.133e-9■■■□□ 14.6
MATR3P43243 CELF1-221ENST00000543178 576 ntTSL 410.34□□□□□ -0.753e-9■■■□□ 14.6
MATR3P43243 CELF1-212ENST00000528538 581 ntTSL 49.81□□□□□ -0.843e-9■■■□□ 14.6
MATR3P43243 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC9.4□□□□□ -0.93e-9■■■□□ 14.6
MATR3P43243 CELF1-218ENST00000535982 549 ntTSL 47.97□□□□□ -1.133e-9■■■□□ 14.6
MATR3P43243 CELF1-211ENST00000528434 543 ntTSL 55.97□□□□□ -1.453e-9■■■□□ 14.6
MATR3P43243 CELF1-209ENST00000526277 556 ntTSL 45.7□□□□□ -1.53e-9■■■□□ 14.6
MATR3P43243 RBM26-206ENST00000472143 2192 ntTSL 228.6■■■□□ 2.172e-6■■■□□ 14.6
MATR3P43243 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.98■■□□□ 1.272e-6■■■□□ 14.6
MATR3P43243 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.192e-6■■■□□ 14.6
MATR3P43243 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.532e-6■■■□□ 14.6
MATR3P43243 PPP6R1-204ENST00000587457 2389 ntTSL 217.65■□□□□ 0.422e-6■■■□□ 14.6
MATR3P43243 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.382e-6■■■□□ 14.6
MATR3P43243 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.79■□□□□ 0.282e-6■■■□□ 14.6
MATR3P43243 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.91■□□□□ 0.142e-6■■■□□ 14.6
MATR3P43243 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.262e-6■■■□□ 14.6
MATR3P43243 RBM26-201ENST00000267229 3624 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.652e-6■■■□□ 14.6
MATR3P43243 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.672e-6■■■□□ 14.6
MATR3P43243 CHEK1-205ENST00000498122 755 ntTSL 29.67□□□□□ -0.862e-6■■■□□ 14.6
MATR3P43243 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.072e-6■■■□□ 14.6
MATR3P43243 CCDC66-220ENST00000484623 852 ntTSL 57.2□□□□□ -1.262e-6■■■□□ 14.6
MATR3P43243 NF1-216ENST00000495910 8223 ntTSL 26.02□□□□□ -1.452e-6■■■□□ 14.6
MATR3P43243 CCDC66-204ENST00000422222 1983 ntAPPRIS ALT2 TSL 55.73□□□□□ -1.492e-6■■■□□ 14.6
MATR3P43243 CCDC66-222ENST00000494672 577 ntTSL 44.99□□□□□ -1.612e-6■■■□□ 14.6
MATR3P43243 PHF3-211ENST00000514822 486 ntTSL 43.96□□□□□ -1.782e-6■■■□□ 14.6
MATR3P43243 CCDC66-213ENST00000471681 3120 ntTSL 53.79□□□□□ -1.82e-6■■■□□ 14.6
MATR3P43243 CCDC66-202ENST00000341455 3042 ntTSL 1 (best)3.66□□□□□ -1.822e-6■■■□□ 14.6
MATR3P43243 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.972e-6■■■□□ 14.6
MATR3P43243 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.82■□□□□ 0.63e-6■■□□□ 14.5
MATR3P43243 PPIL2-211ENST00000498109 563 ntTSL 215.47■□□□□ 0.073e-6■■□□□ 14.5
MATR3P43243 PPIL2-210ENST00000496819 494 ntTSL 1 (best)10.32□□□□□ -0.763e-6■■□□□ 14.5
MATR3P43243 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.56e-7■■□□□ 14.5
MATR3P43243 PLXNB1-209ENST00000466353 626 ntTSL 320.44■□□□□ 0.866e-13■■□□□ 14.5
MATR3P43243 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.56e-13■■□□□ 14.5
MATR3P43243 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.176e-13■■□□□ 14.5
MATR3P43243 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.38■□□□□ 0.854e-7■■□□□ 14.5
MATR3P43243 KLK7-201ENST00000304045 1975 ntTSL 219.66■□□□□ 0.744e-7■■□□□ 14.5
MATR3P43243 KLK7-202ENST00000391807 1912 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.294e-7■■□□□ 14.5
MATR3P43243 KLK7-203ENST00000593904 624 ntTSL 412.05□□□□□ -0.484e-7■■□□□ 14.5
MATR3P43243 KLK7-205ENST00000595820 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.544e-7■■□□□ 14.5
MATR3P43243 OR51A10P-201ENST00000307165 937 ntBASIC8.16□□□□□ -1.14e-10■■□□□ 14.5
MATR3P43243 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC12.79□□□□□ -0.369e-7■■□□□ 14.5
MATR3P43243 SDCBP2-AS1-205ENST00000609745 855 ntTSL 415.05■□□□□ -02e-6■■□□□ 14.5
MATR3P43243 BMPR1A-205ENST00000638429 5632 ntTSL 520.2■□□□□ 0.827e-7■■□□□ 14.4
MATR3P43243 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.597e-7■■□□□ 14.4
MATR3P43243 COBLL1-213ENST00000456693 750 ntTSL 522.21■■□□□ 1.152e-6■■□□□ 14.4
MATR3P43243 COBLL1-224ENST00000496396 944 ntTSL 1 (best)20.4■□□□□ 0.862e-6■■□□□ 14.4
MATR3P43243 COBLL1-210ENST00000448708 549 ntTSL 520.26■□□□□ 0.832e-6■■□□□ 14.4
MATR3P43243 COBLL1-205ENST00000414843 575 ntTSL 419.49■□□□□ 0.712e-6■■□□□ 14.4
MATR3P43243 COBLL1-209ENST00000445474 575 ntTSL 419.46■□□□□ 0.712e-6■■□□□ 14.4
MATR3P43243 COBLL1-217ENST00000483743 541 ntTSL 519.41■□□□□ 0.72e-6■■□□□ 14.4
MATR3P43243 COBLL1-208ENST00000444537 737 ntTSL 517.64■□□□□ 0.412e-6■■□□□ 14.4
MATR3P43243 COBLL1-207ENST00000439313 565 ntTSL 516.66■□□□□ 0.262e-6■■□□□ 14.4
MATR3P43243 TVP23C-CDRT4-204ENST00000557349 1005 ntTSL 218.35■□□□□ 0.536e-7■■□□□ 14.4
MATR3P43243 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.046e-7■■□□□ 14.4
MATR3P43243 CDRT4-203ENST00000524205 632 ntAPPRIS ALT2 TSL 211.43□□□□□ -0.586e-7■■□□□ 14.4
MATR3P43243 TVP23C-CDRT4-201ENST00000481756 556 ntTSL 46.19□□□□□ -1.426e-7■■□□□ 14.4
MATR3P43243 TVP23C-CDRT4-202ENST00000518506 520 ntTSL 51.97□□□□□ -2.096e-7■■□□□ 14.4
MATR3P43243 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.472e-11■■□□□ 14.4
MATR3P43243 CCDC144NL-AS1-214ENST00000581958 1188 ntTSL 5 BASIC11.6□□□□□ -0.553e-6■■□□□ 14.4
MATR3P43243 CCDC144NL-AS1-204ENST00000437829 837 ntTSL 56.74□□□□□ -1.333e-6■■□□□ 14.4
MATR3P43243 PPARA-206ENST00000440343 368 ntTSL 1 (best)29.77■■■□□ 2.365e-7■■□□□ 14.4
MATR3P43243 LNPK-202ENST00000392540 528 ntTSL 426.37■■□□□ 1.815e-7■■□□□ 14.4
MATR3P43243 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.85■■□□□ 1.735e-7■■□□□ 14.4
MATR3P43243 SORL1-210ENST00000532451 2165 ntTSL 1 (best)25.76■■□□□ 1.712e-6■■□□□ 14.4
MATR3P43243 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.64■■□□□ 1.385e-7■■□□□ 14.4
MATR3P43243 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.58■■□□□ 1.055e-7■■□□□ 14.4
MATR3P43243 RPS6KB1-208ENST00000489824 909 ntTSL 321.29■■□□□ 16e-7■■□□□ 14.4
MATR3P43243 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.55■□□□□ 0.886e-7■■□□□ 14.4
MATR3P43243 FBXO34-204ENST00000555087 612 ntTSL 420.51■□□□□ 0.875e-7■■□□□ 14.4
MATR3P43243 DCAF5-204ENST00000553943 736 ntTSL 320.42■□□□□ 0.865e-7■■□□□ 14.4
MATR3P43243 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.585e-7■■□□□ 14.4
MATR3P43243 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.38■□□□□ 0.536e-7■■□□□ 14.4
MATR3P43243 PIGG-207ENST00000504187 1784 ntTSL 218.23■□□□□ 0.515e-7■■□□□ 14.4
MATR3P43243 PPARA-204ENST00000415785 531 ntTSL 417.53■□□□□ 0.45e-7■■□□□ 14.4
MATR3P43243 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.395e-7■■□□□ 14.4
MATR3P43243 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.295e-7■■□□□ 14.4
MATR3P43243 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.81■□□□□ 0.285e-7■■□□□ 14.4
MATR3P43243 PIGG-211ENST00000506402 2387 ntTSL 1 (best)16.67■□□□□ 0.265e-7■■□□□ 14.4
MATR3P43243 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.47■□□□□ 0.235e-7■■□□□ 14.4
MATR3P43243 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.125e-7■■□□□ 14.4
MATR3P43243 PPARA-205ENST00000420804 572 ntTSL 215.76■□□□□ 0.115e-7■■□□□ 14.4
MATR3P43243 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.64■□□□□ 0.092e-6■■□□□ 14.4
MATR3P43243 RPS6KB1-205ENST00000472940 2808 ntTSL 215.33■□□□□ 0.046e-7■■□□□ 14.4
MATR3P43243 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC15.02□□□□□ -0.015e-7■■□□□ 14.4
MATR3P43243 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.015e-7■■□□□ 14.4
MATR3P43243 FOXN2-202ENST00000413569 932 ntTSL 314.97□□□□□ -0.014e-8■■□□□ 14.4
MATR3P43243 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.044e-6■■□□□ 14.4
MATR3P43243 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC14.72□□□□□ -0.054e-6■■□□□ 14.4
MATR3P43243 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC14.67□□□□□ -0.065e-7■■□□□ 14.4
MATR3P43243 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.63□□□□□ -0.075e-7■■□□□ 14.4
MATR3P43243 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC14.44□□□□□ -0.15e-7■■□□□ 14.4
MATR3P43243 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.15e-7■■□□□ 14.4
MATR3P43243 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.155e-7■■□□□ 14.4
MATR3P43243 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC14□□□□□ -0.176e-7■■□□□ 14.4
Retrieved 100 of 16,209 protein–RNA pairs in 94.9 ms