RNA–Protein interactions for RNA: ENST00000358536.8

PLXNB1-202, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,308 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-202ENST00000358536 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
PLXNB1-202ENST00000358536 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
PLXNB1-202ENST00000358536 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
PLXNB1-202ENST00000358536 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
PLXNB1-202ENST00000358536 PELP1Q8IZL8 1130 aaKnown RBP24.44■■□□□ 1.5
PLXNB1-202ENST00000358536 APLP2Q06481 763 aa24.12■■□□□ 1.45
PLXNB1-202ENST00000358536 TTBK1Q5TCY1 1321 aaPredicted RBP23.9■■□□□ 1.42
PLXNB1-202ENST00000358536 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
PLXNB1-202ENST00000358536 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
PLXNB1-202ENST00000358536 ERICH6Q7L0X2 663 aa23.63■■□□□ 1.37
PLXNB1-202ENST00000358536 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
PLXNB1-202ENST00000358536 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
PLXNB1-202ENST00000358536 ATP1B4Q9UN42 357 aaPredicted RBP23.45■■□□□ 1.34
PLXNB1-202ENST00000358536 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
PLXNB1-202ENST00000358536 CENPBP07199 599 aaPredicted RBP23.31■■□□□ 1.32
PLXNB1-202ENST00000358536 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
PLXNB1-202ENST00000358536 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
PLXNB1-202ENST00000358536 NEFLP07196 543 aa23.02■■□□□ 1.28
PLXNB1-202ENST00000358536 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
PLXNB1-202ENST00000358536 YTHDC1Q96MU7 727 aaKnown RBP23.01■■□□□ 1.27
PLXNB1-202ENST00000358536 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
PLXNB1-202ENST00000358536 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
PLXNB1-202ENST00000358536 POLR3GLQ9BT43 218 aa22.63■■□□□ 1.21
PLXNB1-202ENST00000358536 MYT1Q01538 1121 aa22.6■■□□□ 1.21
PLXNB1-202ENST00000358536 DAXXQ9UER7 740 aaPredicted RBP22.58■■□□□ 1.21
PLXNB1-202ENST00000358536 ITGAEP38570 1179 aa22.5■■□□□ 1.19
PLXNB1-202ENST00000358536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
PLXNB1-202ENST00000358536 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
PLXNB1-202ENST00000358536 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
PLXNB1-202ENST00000358536 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
PLXNB1-202ENST00000358536 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
PLXNB1-202ENST00000358536 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
PLXNB1-202ENST00000358536 HRCP23327 699 aa22.08■■□□□ 1.12
PLXNB1-202ENST00000358536 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
PLXNB1-202ENST00000358536 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
PLXNB1-202ENST00000358536 LOC105371045A0A1W2PR82 267 aa21.96■■□□□ 1.11
PLXNB1-202ENST00000358536 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
PLXNB1-202ENST00000358536 FAM50AQ14320 339 aaKnown RBP21.8■■□□□ 1.08
PLXNB1-202ENST00000358536 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
PLXNB1-202ENST00000358536 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
PLXNB1-202ENST00000358536 NEUROD1Q13562 356 aa21.68■■□□□ 1.06
PLXNB1-202ENST00000358536 BCL11AQ9H165 835 aa21.64■■□□□ 1.05
PLXNB1-202ENST00000358536 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
PLXNB1-202ENST00000358536 BCANQ96GW7 911 aa21.61■■□□□ 1.05
PLXNB1-202ENST00000358536 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
PLXNB1-202ENST00000358536 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
PLXNB1-202ENST00000358536 ANP32CO43423 234 aa21.44■■□□□ 1.02
PLXNB1-202ENST00000358536 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
PLXNB1-202ENST00000358536 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
PLXNB1-202ENST00000358536 FBLN2P98095 1184 aa21.39■■□□□ 1.01
PLXNB1-202ENST00000358536 GTF3C3Q9Y5Q9 886 aa21.3■■□□□ 1
PLXNB1-202ENST00000358536 NEFMP07197 916 aa21.3■■□□□ 1
PLXNB1-202ENST00000358536 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 12e-7■■□□□ 13.4
PLXNB1-202ENST00000358536 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
PLXNB1-202ENST00000358536 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
PLXNB1-202ENST00000358536 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
PLXNB1-202ENST00000358536 ANP32AP39687 249 aaKnown RBP21.08■□□□□ 0.97
PLXNB1-202ENST00000358536 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
PLXNB1-202ENST00000358536 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
PLXNB1-202ENST00000358536 ABCC9O60706 1549 aa21.04■□□□□ 0.96
PLXNB1-202ENST00000358536 HSP90AA1P07900 732 aaKnown RBP20.97■□□□□ 0.95
PLXNB1-202ENST00000358536 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
PLXNB1-202ENST00000358536 CHGAP10645 457 aaKnown RBP20.95■□□□□ 0.94
PLXNB1-202ENST00000358536 ANP32BQ92688 251 aaKnown RBP20.93■□□□□ 0.94
PLXNB1-202ENST00000358536 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
PLXNB1-202ENST00000358536 EIF5BO60841 1220 aaKnown RBP20.87■□□□□ 0.93
PLXNB1-202ENST00000358536 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
PLXNB1-202ENST00000358536 FKBP8Q14318 412 aa20.8■□□□□ 0.92
PLXNB1-202ENST00000358536 UPF2Q9HAU5 1272 aaKnown RBP20.8■□□□□ 0.92
PLXNB1-202ENST00000358536 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
PLXNB1-202ENST00000358536 FAM9BQ8IZU0 186 aa20.77■□□□□ 0.92
PLXNB1-202ENST00000358536 HNRNPUQ00839 825 aaKnown RBP eCLIP20.73■□□□□ 0.917e-11■□□□□ 8.3
PLXNB1-202ENST00000358536 TONSLQ96HA7 1378 aa20.71■□□□□ 0.91
PLXNB1-202ENST00000358536 ARXQ96QS3 562 aa20.7■□□□□ 0.9
PLXNB1-202ENST00000358536 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
PLXNB1-202ENST00000358536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.94e-8■□□□□ 10.9
PLXNB1-202ENST00000358536 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
PLXNB1-202ENST00000358536 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
PLXNB1-202ENST00000358536 A0A0G2JS52 829 aa20.64■□□□□ 0.89
PLXNB1-202ENST00000358536 NBR1Q14596 966 aa20.62■□□□□ 0.89
PLXNB1-202ENST00000358536 NPM1P06748 294 aaKnown RBP eCLIP20.62■□□□□ 0.89
PLXNB1-202ENST00000358536 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
PLXNB1-202ENST00000358536 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.58■□□□□ 0.89
PLXNB1-202ENST00000358536 CCDC136Q96JN2 1154 aa20.57■□□□□ 0.88
PLXNB1-202ENST00000358536 WDR43Q15061 677 aaKnown RBP eCLIP20.57■□□□□ 0.888e-8■■■■□ 19.9
PLXNB1-202ENST00000358536 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
PLXNB1-202ENST00000358536 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
PLXNB1-202ENST00000358536 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
PLXNB1-202ENST00000358536 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
PLXNB1-202ENST00000358536 ZBTB7CA1YPR0 619 aa20.52■□□□□ 0.88
PLXNB1-202ENST00000358536 CDK11BP21127 795 aaKnown RBP20.48■□□□□ 0.87
PLXNB1-202ENST00000358536 GLIPR1L2Q4G1C9 344 aa20.45■□□□□ 0.86
PLXNB1-202ENST00000358536 MYH16Q9H6N6 1097 aa20.44■□□□□ 0.86
PLXNB1-202ENST00000358536 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
PLXNB1-202ENST00000358536 C14orf37Q86TY3 774 aa20.42■□□□□ 0.86
PLXNB1-202ENST00000358536 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
PLXNB1-202ENST00000358536 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
PLXNB1-202ENST00000358536 TSPY4P0CV99 314 aa20.35■□□□□ 0.85
PLXNB1-202ENST00000358536 TSPY10P0CW01 314 aa20.35■□□□□ 0.85
PLXNB1-202ENST00000358536 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms