RNA–Protein interactions for RNA: ENST00000422222.5

CCDC66-204, Transcript of coiled-coil domain containing 66, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC66, Length 1,983 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-204ENST00000422222 AEBP2Q6ZN18 517 aaPredicted RBP14.04□□□□□ -0.16
CCDC66-204ENST00000422222 CHIC1Q5VXU3 224 aa13.82□□□□□ -0.2
CCDC66-204ENST00000422222 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
CCDC66-204ENST00000422222 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
CCDC66-204ENST00000422222 SENP3Q9H4L4 574 aaPredicted RBP12.06□□□□□ -0.48
CCDC66-204ENST00000422222 NISCHQ9Y2I1 1504 aa11.56□□□□□ -0.56
CCDC66-204ENST00000422222 PLPPR3Q6T4P5 718 aa11.28□□□□□ -0.6
CCDC66-204ENST00000422222 FOXD1Q16676 465 aa11.15□□□□□ -0.62
CCDC66-204ENST00000422222 MSH5O43196 834 aa11.05□□□□□ -0.64
CCDC66-204ENST00000422222 ADRA2BP18089 450 aa10.72□□□□□ -0.69
CCDC66-204ENST00000422222 PPP6R1Q9UPN7 881 aa10.72□□□□□ -0.69
CCDC66-204ENST00000422222 PIAS4Q8N2W9 510 aaPredicted RBP10.44□□□□□ -0.74
CCDC66-204ENST00000422222 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
CCDC66-204ENST00000422222 PPP4R3CPQ6ZMV5 832 aa9.97□□□□□ -0.81
CCDC66-204ENST00000422222 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
CCDC66-204ENST00000422222 KCNA4P22459 653 aa9.88□□□□□ -0.83
CCDC66-204ENST00000422222 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
CCDC66-204ENST00000422222 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
CCDC66-204ENST00000422222 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
CCDC66-204ENST00000422222 MAPK8IP2Q13387 824 aaPredicted RBP9.7□□□□□ -0.86
CCDC66-204ENST00000422222 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
CCDC66-204ENST00000422222 CNKSR2Q8WXI2 1034 aa9.65□□□□□ -0.86
CCDC66-204ENST00000422222 ABCC9O60706 1549 aa9.6□□□□□ -0.87
CCDC66-204ENST00000422222 NPM3O75607 178 aaKnown RBP9.6□□□□□ -0.87
CCDC66-204ENST00000422222 POTEHQ6S545 545 aa9.57□□□□□ -0.88
CCDC66-204ENST00000422222 DCAF1Q9Y4B6 1507 aa9.53□□□□□ -0.88
CCDC66-204ENST00000422222 SHROOM4Q9ULL8 1493 aa9.51□□□□□ -0.89
CCDC66-204ENST00000422222 DMRT2Q9Y5R5 561 aa9.5□□□□□ -0.89
CCDC66-204ENST00000422222 MYO15BQ96JP2 1530 aa9.43□□□□□ -0.9
CCDC66-204ENST00000422222 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
CCDC66-204ENST00000422222 NACADO15069 1562 aa9.43□□□□□ -0.9
CCDC66-204ENST00000422222 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-204ENST00000422222 RB1CC1Q8TDY2 1594 aa9.37□□□□□ -0.91
CCDC66-204ENST00000422222 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-204ENST00000422222 EHMT2Q96KQ7 1210 aa9.33□□□□□ -0.92
CCDC66-204ENST00000422222 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
CCDC66-204ENST00000422222 DNAJC5BQ9UF47 199 aa9.24□□□□□ -0.93
CCDC66-204ENST00000422222 SUPT5HO00267 1087 aaKnown RBP9.2□□□□□ -0.94
CCDC66-204ENST00000422222 RNF39Q9H2S5 420 aa9.2□□□□□ -0.94
CCDC66-204ENST00000422222 C1QBPQ07021 282 aaKnown RBP9.15□□□□□ -0.95
CCDC66-204ENST00000422222 DCAF8L1A6NGE4 600 aa9.14□□□□□ -0.95
CCDC66-204ENST00000422222 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
CCDC66-204ENST00000422222 SLC24A1O60721 1099 aa9.12□□□□□ -0.95
CCDC66-204ENST00000422222 UNC13AQ9UPW8 1703 aa9.1□□□□□ -0.95
CCDC66-204ENST00000422222 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCDC66-204ENST00000422222 ZBTB22O15209 634 aa9.08□□□□□ -0.96
CCDC66-204ENST00000422222 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
CCDC66-204ENST00000422222 SLC4A2P04920 1241 aa9.03□□□□□ -0.96
CCDC66-204ENST00000422222 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
CCDC66-204ENST00000422222 CECR2Q9BXF3 1484 aa8.97□□□□□ -0.97
CCDC66-204ENST00000422222 RSF1Q96T23 1441 aaPredicted RBP8.96□□□□□ -0.97
CCDC66-204ENST00000422222 BAZ1AQ9NRL2 1556 aaPredicted RBP8.96□□□□□ -0.98
CCDC66-204ENST00000422222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.95□□□□□ -0.988e-6■□□□□ 10.7
CCDC66-204ENST00000422222 MROH2BQ7Z745 1585 aa8.92□□□□□ -0.98
CCDC66-204ENST00000422222 SMARCA4P51532 1647 aa8.88□□□□□ -0.99
CCDC66-204ENST00000422222 MYCNP04198 464 aaPredicted RBP8.86□□□□□ -0.99
CCDC66-204ENST00000422222 WIZO95785 1651 aa8.86□□□□□ -0.99
CCDC66-204ENST00000422222 U3KPZ7 1027 aaPredicted RBP8.79□□□□□ -1
CCDC66-204ENST00000422222 SMARCA2P51531 1590 aa8.78□□□□□ -1
CCDC66-204ENST00000422222 EIF4G1Q04637 1599 aaKnown RBP8.77□□□□□ -1
CCDC66-204ENST00000422222 TOP2AP11388 1531 aaKnown RBP8.77□□□□□ -1.01
CCDC66-204ENST00000422222 ATAD2BQ9ULI0 1458 aa8.76□□□□□ -1.01
CCDC66-204ENST00000422222 BAZ1BQ9UIG0 1483 aaKnown RBP8.75□□□□□ -1.01
CCDC66-204ENST00000422222 PEG3Q9GZU2 1588 aa8.74□□□□□ -1.01
CCDC66-204ENST00000422222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.72□□□□□ -1.01
CCDC66-204ENST00000422222 HNRNPUL2Q1KMD3 747 aaKnown RBP8.72□□□□□ -1.01
CCDC66-204ENST00000422222 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
CCDC66-204ENST00000422222 SAMD1Q6SPF0 538 aaPredicted RBP8.7□□□□□ -1.02
CCDC66-204ENST00000422222 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
CCDC66-204ENST00000422222 NCAPD3P42695 1498 aa8.68□□□□□ -1.02
CCDC66-204ENST00000422222 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
CCDC66-204ENST00000422222 HMGXB3Q12766 1538 aa8.66□□□□□ -1.02
CCDC66-204ENST00000422222 CC2D2AQ9P2K1 1620 aa8.66□□□□□ -1.02
CCDC66-204ENST00000422222 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
CCDC66-204ENST00000422222 APLP2Q06481 763 aa8.6□□□□□ -1.03
CCDC66-204ENST00000422222 RTN4Q9NQC3 1192 aaKnown RBP8.54□□□□□ -1.04
CCDC66-204ENST00000422222 SPINK5Q9NQ38 1064 aaPredicted RBP8.53□□□□□ -1.04
CCDC66-204ENST00000422222 CAPN15O75808 1086 aa8.5□□□□□ -1.05
CCDC66-204ENST00000422222 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
CCDC66-204ENST00000422222 CADPSQ9ULU8 1353 aa8.5□□□□□ -1.05
CCDC66-204ENST00000422222 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
CCDC66-204ENST00000422222 ABCC8Q09428 1581 aa8.49□□□□□ -1.05
CCDC66-204ENST00000422222 CFTRP13569 1480 aa8.49□□□□□ -1.05
CCDC66-204ENST00000422222 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
CCDC66-204ENST00000422222 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
CCDC66-204ENST00000422222 PLSCR2Q9NRY7 297 aa8.48□□□□□ -1.05
CCDC66-204ENST00000422222 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
CCDC66-204ENST00000422222 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
CCDC66-204ENST00000422222 LOC105371045A0A1W2PR82 267 aa8.42□□□□□ -1.06
CCDC66-204ENST00000422222 LAMC3Q9Y6N6 1575 aa8.41□□□□□ -1.06
CCDC66-204ENST00000422222 SP7Q8TDD2 431 aaPredicted RBP8.41□□□□□ -1.06
CCDC66-204ENST00000422222 PDS5BQ9NTI5 1447 aa8.4□□□□□ -1.06
CCDC66-204ENST00000422222 FANCD2Q9BXW9 1451 aa8.4□□□□□ -1.06
CCDC66-204ENST00000422222 NESP48681 1621 aa8.38□□□□□ -1.07
CCDC66-204ENST00000422222 SYNJ1O43426 1573 aa8.38□□□□□ -1.07
CCDC66-204ENST00000422222 EEA1Q15075 1411 aa8.38□□□□□ -1.07
CCDC66-204ENST00000422222 POLA2Q14181 598 aa8.37□□□□□ -1.07
CCDC66-204ENST00000422222 TOP2BQ02880 1626 aa8.37□□□□□ -1.07
CCDC66-204ENST00000422222 CEP164Q9UPV0 1460 aa8.36□□□□□ -1.07
CCDC66-204ENST00000422222 ABCB7O75027 752 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms