RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 NISCHQ9Y2I1 1504 aa40.55■■■■■ 4.08
TVP23C-CDRT4-204ENST00000557349 CCDC180Q9P1Z9 1646 aa36.09■■■■□ 3.37
TVP23C-CDRT4-204ENST00000557349 ABCC9O60706 1549 aa35.31■■■■□ 3.24
TVP23C-CDRT4-204ENST00000557349 RB1CC1Q8TDY2 1594 aa33.97■■■■□ 3.03
TVP23C-CDRT4-204ENST00000557349 DCAF8L2P0C7V8 631 aa33.91■■■■□ 3.02
TVP23C-CDRT4-204ENST00000557349 NACADO15069 1562 aa33.9■■■■□ 3.02
TVP23C-CDRT4-204ENST00000557349 ZCCHC6Q5VYS8 1495 aaKnown RBP33.81■■■■□ 3
TVP23C-CDRT4-204ENST00000557349 MYO15BQ96JP2 1530 aa33.68■■■□□ 2.98
TVP23C-CDRT4-204ENST00000557349 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
TVP23C-CDRT4-204ENST00000557349 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
TVP23C-CDRT4-204ENST00000557349 SCRIBQ14160 1630 aa32.97■■■□□ 2.87
TVP23C-CDRT4-204ENST00000557349 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
TVP23C-CDRT4-204ENST00000557349 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
TVP23C-CDRT4-204ENST00000557349 SHROOM4Q9ULL8 1493 aa32.59■■■□□ 2.81
TVP23C-CDRT4-204ENST00000557349 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
TVP23C-CDRT4-204ENST00000557349 EIF4G1Q04637 1599 aaKnown RBP32.06■■■□□ 2.72
TVP23C-CDRT4-204ENST00000557349 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
TVP23C-CDRT4-204ENST00000557349 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
TVP23C-CDRT4-204ENST00000557349 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
TVP23C-CDRT4-204ENST00000557349 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
TVP23C-CDRT4-204ENST00000557349 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
TVP23C-CDRT4-204ENST00000557349 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
TVP23C-CDRT4-204ENST00000557349 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
TVP23C-CDRT4-204ENST00000557349 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
TVP23C-CDRT4-204ENST00000557349 PEG3Q9GZU2 1588 aa31.16■■■□□ 2.58
TVP23C-CDRT4-204ENST00000557349 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
TVP23C-CDRT4-204ENST00000557349 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
TVP23C-CDRT4-204ENST00000557349 WIZO95785 1651 aa30.93■■■□□ 2.54
TVP23C-CDRT4-204ENST00000557349 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.53
TVP23C-CDRT4-204ENST00000557349 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
TVP23C-CDRT4-204ENST00000557349 NESP48681 1621 aa30.53■■■□□ 2.48
TVP23C-CDRT4-204ENST00000557349 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
TVP23C-CDRT4-204ENST00000557349 LAMC3Q9Y6N6 1575 aa30.48■■■□□ 2.47
TVP23C-CDRT4-204ENST00000557349 CADPSQ9ULU8 1353 aa30.35■■■□□ 2.45
TVP23C-CDRT4-204ENST00000557349 PDS5BQ9NTI5 1447 aa30.26■■■□□ 2.43
TVP23C-CDRT4-204ENST00000557349 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
TVP23C-CDRT4-204ENST00000557349 KIF21AQ7Z4S6 1674 aa30.2■■■□□ 2.43
TVP23C-CDRT4-204ENST00000557349 CFTRP13569 1480 aa30.18■■■□□ 2.42
TVP23C-CDRT4-204ENST00000557349 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
TVP23C-CDRT4-204ENST00000557349 CUX2O14529 1486 aa30.1■■■□□ 2.41
TVP23C-CDRT4-204ENST00000557349 THOC2Q8NI27 1593 aaKnown RBP30.1■■■□□ 2.41
TVP23C-CDRT4-204ENST00000557349 FANCD2Q9BXW9 1451 aa30.05■■■□□ 2.4
TVP23C-CDRT4-204ENST00000557349 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
TVP23C-CDRT4-204ENST00000557349 PRDM2Q13029 1718 aa30■■■□□ 2.39
TVP23C-CDRT4-204ENST00000557349 MRC2Q9UBG0 1479 aa29.98■■■□□ 2.39
TVP23C-CDRT4-204ENST00000557349 WDR62O43379 1518 aa29.86■■■□□ 2.37
TVP23C-CDRT4-204ENST00000557349 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
TVP23C-CDRT4-204ENST00000557349 TOPBP1Q92547 1522 aa29.56■■■□□ 2.32
TVP23C-CDRT4-204ENST00000557349 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
TVP23C-CDRT4-204ENST00000557349 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
TVP23C-CDRT4-204ENST00000557349 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
TVP23C-CDRT4-204ENST00000557349 CUX1P39880 1505 aa29.33■■■□□ 2.29
TVP23C-CDRT4-204ENST00000557349 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
TVP23C-CDRT4-204ENST00000557349 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
TVP23C-CDRT4-204ENST00000557349 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
TVP23C-CDRT4-204ENST00000557349 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
TVP23C-CDRT4-204ENST00000557349 SOGA1O94964 1423 aa29.18■■■□□ 2.26
TVP23C-CDRT4-204ENST00000557349 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
TVP23C-CDRT4-204ENST00000557349 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
TVP23C-CDRT4-204ENST00000557349 EIF4G3O43432 1585 aaKnown RBP29.17■■■□□ 2.26
TVP23C-CDRT4-204ENST00000557349 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
TVP23C-CDRT4-204ENST00000557349 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
TVP23C-CDRT4-204ENST00000557349 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
TVP23C-CDRT4-204ENST00000557349 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
TVP23C-CDRT4-204ENST00000557349 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.24
TVP23C-CDRT4-204ENST00000557349 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
TVP23C-CDRT4-204ENST00000557349 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
TVP23C-CDRT4-204ENST00000557349 ABCA10Q8WWZ4 1543 aa28.95■■■□□ 2.23
TVP23C-CDRT4-204ENST00000557349 ABCA5Q8WWZ7 1642 aa28.86■■■□□ 2.21
TVP23C-CDRT4-204ENST00000557349 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
TVP23C-CDRT4-204ENST00000557349 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
TVP23C-CDRT4-204ENST00000557349 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
TVP23C-CDRT4-204ENST00000557349 PBRM1Q86U86 1689 aa28.83■■■□□ 2.21
TVP23C-CDRT4-204ENST00000557349 OSCARQ8IYS5 282 aa28.81■■■□□ 2.2
TVP23C-CDRT4-204ENST00000557349 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
TVP23C-CDRT4-204ENST00000557349 CHD1O14646 1710 aa28.78■■■□□ 2.2
TVP23C-CDRT4-204ENST00000557349 FBLN2P98095 1184 aa28.75■■■□□ 2.19
TVP23C-CDRT4-204ENST00000557349 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
TVP23C-CDRT4-204ENST00000557349 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
TVP23C-CDRT4-204ENST00000557349 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
TVP23C-CDRT4-204ENST00000557349 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
TVP23C-CDRT4-204ENST00000557349 KIF27Q86VH2 1401 aa28.56■■■□□ 2.16
TVP23C-CDRT4-204ENST00000557349 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
TVP23C-CDRT4-204ENST00000557349 GRIN2AQ12879 1464 aa28.49■■■□□ 2.15
TVP23C-CDRT4-204ENST00000557349 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
TVP23C-CDRT4-204ENST00000557349 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
TVP23C-CDRT4-204ENST00000557349 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
TVP23C-CDRT4-204ENST00000557349 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
TVP23C-CDRT4-204ENST00000557349 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
TVP23C-CDRT4-204ENST00000557349 ARHGEF11O15085 1522 aa28.39■■■□□ 2.14
TVP23C-CDRT4-204ENST00000557349 CUL7Q14999 1698 aa28.39■■■□□ 2.14
TVP23C-CDRT4-204ENST00000557349 IGF1RP08069 1367 aa28.37■■■□□ 2.13
TVP23C-CDRT4-204ENST00000557349 CEP170Q5SW79 1584 aa28.35■■■□□ 2.13
TVP23C-CDRT4-204ENST00000557349 NUP160Q12769 1436 aa28.34■■■□□ 2.13
TVP23C-CDRT4-204ENST00000557349 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
TVP23C-CDRT4-204ENST00000557349 CARMIL1Q5VZK9 1371 aa28.24■■■□□ 2.11
TVP23C-CDRT4-204ENST00000557349 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
TVP23C-CDRT4-204ENST00000557349 SHROOM2Q13796 1616 aa28.13■■■□□ 2.09
TVP23C-CDRT4-204ENST00000557349 RAPGEF2Q9Y4G8 1499 aa28.1■■■□□ 2.09
TVP23C-CDRT4-204ENST00000557349 CYB5RLQ6IPT4 315 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms