RNA–Protein interactions for RNA: ENST00000471681.5

CCDC66-213, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 3,120 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-213ENST00000471681 AEBP2Q6ZN18 517 aaPredicted RBP10.16□□□□□ -0.78
CCDC66-213ENST00000471681 CHIC1Q5VXU3 224 aa9.76□□□□□ -0.85
CCDC66-213ENST00000471681 NISCHQ9Y2I1 1504 aa8.98□□□□□ -0.97
CCDC66-213ENST00000471681 SENP3Q9H4L4 574 aaPredicted RBP8.92□□□□□ -0.98
CCDC66-213ENST00000471681 PHF23Q9BUL5 403 aaPredicted RBP8.63□□□□□ -1.03
CCDC66-213ENST00000471681 CCDC180Q9P1Z9 1646 aa8.35□□□□□ -1.07
CCDC66-213ENST00000471681 FOXD1Q16676 465 aa8.14□□□□□ -1.11
CCDC66-213ENST00000471681 MYO15BQ96JP2 1530 aa7.94□□□□□ -1.14
CCDC66-213ENST00000471681 MSH5O43196 834 aa7.89□□□□□ -1.15
CCDC66-213ENST00000471681 DCAF1Q9Y4B6 1507 aa7.88□□□□□ -1.15
CCDC66-213ENST00000471681 PLPPR3Q6T4P5 718 aa7.78□□□□□ -1.16
CCDC66-213ENST00000471681 POTEDQ86YR6 584 aa7.63□□□□□ -1.19
CCDC66-213ENST00000471681 SHROOM4Q9ULL8 1493 aa7.62□□□□□ -1.19
CCDC66-213ENST00000471681 ZCCHC6Q5VYS8 1495 aaKnown RBP7.61□□□□□ -1.19
CCDC66-213ENST00000471681 NACADO15069 1562 aa7.59□□□□□ -1.19
CCDC66-213ENST00000471681 PIAS4Q8N2W9 510 aaPredicted RBP7.55□□□□□ -1.2
CCDC66-213ENST00000471681 UNC13AQ9UPW8 1703 aa7.44□□□□□ -1.22
CCDC66-213ENST00000471681 RB1CC1Q8TDY2 1594 aa7.43□□□□□ -1.22
CCDC66-213ENST00000471681 PPP6R1Q9UPN7 881 aa7.41□□□□□ -1.22
CCDC66-213ENST00000471681 ADRA2BP18089 450 aa7.38□□□□□ -1.23
CCDC66-213ENST00000471681 BICRAQ9NZM4 1560 aa7.27□□□□□ -1.25
CCDC66-213ENST00000471681 PEG3Q9GZU2 1588 aa7.24□□□□□ -1.25
CCDC66-213ENST00000471681 ABCC9O60706 1549 aa7.12□□□□□ -1.27
CCDC66-213ENST00000471681 SCAF1Q9H7N4 1312 aaKnown RBP7.11□□□□□ -1.27
CCDC66-213ENST00000471681 SMARCA2P51531 1590 aa7.09□□□□□ -1.27
CCDC66-213ENST00000471681 DMRT2Q9Y5R5 561 aa7.06□□□□□ -1.28
CCDC66-213ENST00000471681 PRDM2Q13029 1718 aa7.04□□□□□ -1.28
CCDC66-213ENST00000471681 HMGXB3Q12766 1538 aa7.03□□□□□ -1.28
CCDC66-213ENST00000471681 SMARCA4P51532 1647 aa6.98□□□□□ -1.29
CCDC66-213ENST00000471681 BAZ1AQ9NRL2 1556 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-213ENST00000471681 SCRIBQ14160 1630 aa6.93□□□□□ -1.3
CCDC66-213ENST00000471681 EIF4G1Q04637 1599 aaKnown RBP6.92□□□□□ -1.3
CCDC66-213ENST00000471681 DNAJC5BQ9UF47 199 aa6.9□□□□□ -1.3
CCDC66-213ENST00000471681 NCAPD3P42695 1498 aa6.9□□□□□ -1.31
CCDC66-213ENST00000471681 TOP2AP11388 1531 aaKnown RBP6.85□□□□□ -1.31
CCDC66-213ENST00000471681 WDR97A6NE52 1622 aa6.82□□□□□ -1.32
CCDC66-213ENST00000471681 HOXD11P31277 338 aaPredicted RBP6.81□□□□□ -1.32
CCDC66-213ENST00000471681 CC2D2AQ9P2K1 1620 aa6.79□□□□□ -1.32
CCDC66-213ENST00000471681 ATAD2BQ9ULI0 1458 aa6.77□□□□□ -1.33
CCDC66-213ENST00000471681 MAPK8IP2Q13387 824 aaPredicted RBP6.76□□□□□ -1.33
CCDC66-213ENST00000471681 LAMC3Q9Y6N6 1575 aa6.75□□□□□ -1.33
CCDC66-213ENST00000471681 MROH2BQ7Z745 1585 aa6.75□□□□□ -1.33
CCDC66-213ENST00000471681 CNKSR2Q8WXI2 1034 aa6.74□□□□□ -1.33
CCDC66-213ENST00000471681 RNF216Q9NWF9 866 aaPredicted RBP6.72□□□□□ -1.33
CCDC66-213ENST00000471681 RSF1Q96T23 1441 aaPredicted RBP6.72□□□□□ -1.33
CCDC66-213ENST00000471681 PPP4R3CPQ6ZMV5 832 aa6.72□□□□□ -1.33
CCDC66-213ENST00000471681 EHMT2Q96KQ7 1210 aa6.7□□□□□ -1.34
CCDC66-213ENST00000471681 WIZO95785 1651 aa6.7□□□□□ -1.34
CCDC66-213ENST00000471681 BIVM-ERCC5R4GMW8 1640 aa6.68□□□□□ -1.34
CCDC66-213ENST00000471681 CECR2Q9BXF3 1484 aa6.67□□□□□ -1.34
CCDC66-213ENST00000471681 CFTRP13569 1480 aa6.64□□□□□ -1.35
CCDC66-213ENST00000471681 BAZ1BQ9UIG0 1483 aaKnown RBP6.63□□□□□ -1.35
CCDC66-213ENST00000471681 THOC2Q8NI27 1593 aaKnown RBP6.63□□□□□ -1.35
CCDC66-213ENST00000471681 C1QBPQ07021 282 aaKnown RBP6.63□□□□□ -1.35
CCDC66-213ENST00000471681 RNF39Q9H2S5 420 aa6.62□□□□□ -1.35
CCDC66-213ENST00000471681 CACNB1Q02641 598 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-213ENST00000471681 NCBP3Q53F19 620 aaKnown RBP6.61□□□□□ -1.35
CCDC66-213ENST00000471681 WDR62O43379 1518 aa6.6□□□□□ -1.35
CCDC66-213ENST00000471681 ABCC8Q09428 1581 aa6.58□□□□□ -1.36
CCDC66-213ENST00000471681 TOP2BQ02880 1626 aa6.54□□□□□ -1.36
CCDC66-213ENST00000471681 KIF21AQ7Z4S6 1674 aa6.53□□□□□ -1.36
CCDC66-213ENST00000471681 CCDC88BA6NC98 1476 aa6.52□□□□□ -1.36
CCDC66-213ENST00000471681 DNMBPQ6XZF7 1577 aa6.52□□□□□ -1.37
CCDC66-213ENST00000471681 TARBP1Q13395 1621 aaKnown RBP6.51□□□□□ -1.37
CCDC66-213ENST00000471681 CUX2O14529 1486 aa6.51□□□□□ -1.37
CCDC66-213ENST00000471681 ABCA5Q8WWZ7 1642 aa6.49□□□□□ -1.37
CCDC66-213ENST00000471681 CADPSQ9ULU8 1353 aa6.47□□□□□ -1.37
CCDC66-213ENST00000471681 SLC24A1O60721 1099 aa6.46□□□□□ -1.37
CCDC66-213ENST00000471681 KCNA4P22459 653 aa6.45□□□□□ -1.38
CCDC66-213ENST00000471681 CUL7Q14999 1698 aa6.42□□□□□ -1.38
CCDC66-213ENST00000471681 MRC2Q9UBG0 1479 aa6.42□□□□□ -1.38
CCDC66-213ENST00000471681 DCAF8L1A6NGE4 600 aa6.41□□□□□ -1.38
CCDC66-213ENST00000471681 PBRM1Q86U86 1689 aa6.41□□□□□ -1.38
CCDC66-213ENST00000471681 PDS5BQ9NTI5 1447 aa6.4□□□□□ -1.38
CCDC66-213ENST00000471681 ABCA10Q8WWZ4 1543 aa6.4□□□□□ -1.38
CCDC66-213ENST00000471681 ERICH3Q5RHP9 1530 aa6.4□□□□□ -1.39
CCDC66-213ENST00000471681 SHROOM2Q13796 1616 aa6.39□□□□□ -1.39
CCDC66-213ENST00000471681 CUX1P39880 1505 aa6.38□□□□□ -1.39
CCDC66-213ENST00000471681 URB2Q14146 1524 aaKnown RBP6.37□□□□□ -1.39
CCDC66-213ENST00000471681 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
CCDC66-213ENST00000471681 CSRNP3Q8WYN3 585 aa6.36□□□□□ -1.39
CCDC66-213ENST00000471681 SYNJ1O43426 1573 aa6.36□□□□□ -1.39
CCDC66-213ENST00000471681 KIF21BO75037 1637 aa6.36□□□□□ -1.39
CCDC66-213ENST00000471681 CEP164Q9UPV0 1460 aa6.36□□□□□ -1.39
CCDC66-213ENST00000471681 FANCD2Q9BXW9 1451 aa6.36□□□□□ -1.39
CCDC66-213ENST00000471681 IFT140Q96RY7 1462 aa6.35□□□□□ -1.39
CCDC66-213ENST00000471681 EEA1Q15075 1411 aa6.34□□□□□ -1.39
CCDC66-213ENST00000471681 APLP2Q06481 763 aa6.33□□□□□ -1.4
CCDC66-213ENST00000471681 NESP48681 1621 aa6.32□□□□□ -1.4
CCDC66-213ENST00000471681 PABPN1Q86U42 306 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCDC66-213ENST00000471681 ADAMTS12P58397 1594 aa6.32□□□□□ -1.4
CCDC66-213ENST00000471681 CTTNBP2Q8WZ74 1663 aa6.3□□□□□ -1.4
CCDC66-213ENST00000471681 NPM3O75607 178 aaKnown RBP6.3□□□□□ -1.4
CCDC66-213ENST00000471681 EIF4G3O43432 1585 aaKnown RBP6.3□□□□□ -1.4
CCDC66-213ENST00000471681 CLASP1Q7Z460 1538 aa6.3□□□□□ -1.4
CCDC66-213ENST00000471681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.3□□□□□ -1.48e-6■□□□□ 10.7
CCDC66-213ENST00000471681 MAGI1Q96QZ7 1491 aaPredicted RBP6.29□□□□□ -1.4
CCDC66-213ENST00000471681 POLA1P09884 1462 aaPredicted RBP6.27□□□□□ -1.41
CCDC66-213ENST00000471681 SAMD9Q5K651 1589 aa6.26□□□□□ -1.41
CCDC66-213ENST00000471681 PRXQ9BXM0 1461 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms