RNA–Protein interactions for RNA: ENST00000524205.3

CDRT4-203, CMT1A duplicated region transcript 4, humanhuman

APPRIS ALT2 TSL 2

Gene CDRT4, Length 632 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-203ENST00000524205 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CDRT4-203ENST00000524205 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
CDRT4-203ENST00000524205 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
CDRT4-203ENST00000524205 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
CDRT4-203ENST00000524205 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
CDRT4-203ENST00000524205 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.14
CDRT4-203ENST00000524205 ABCC9O60706 1549 aa21.84■■□□□ 1.09
CDRT4-203ENST00000524205 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
CDRT4-203ENST00000524205 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
CDRT4-203ENST00000524205 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
CDRT4-203ENST00000524205 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
CDRT4-203ENST00000524205 NACADO15069 1562 aa20.82■□□□□ 0.92
CDRT4-203ENST00000524205 FOXD1Q16676 465 aa20.67■□□□□ 0.9
CDRT4-203ENST00000524205 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
CDRT4-203ENST00000524205 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
CDRT4-203ENST00000524205 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
CDRT4-203ENST00000524205 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
CDRT4-203ENST00000524205 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDRT4-203ENST00000524205 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
CDRT4-203ENST00000524205 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
CDRT4-203ENST00000524205 ADRA2BP18089 450 aa20.11■□□□□ 0.81
CDRT4-203ENST00000524205 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
CDRT4-203ENST00000524205 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
CDRT4-203ENST00000524205 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
CDRT4-203ENST00000524205 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
CDRT4-203ENST00000524205 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
CDRT4-203ENST00000524205 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
CDRT4-203ENST00000524205 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
CDRT4-203ENST00000524205 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CDRT4-203ENST00000524205 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
CDRT4-203ENST00000524205 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
CDRT4-203ENST00000524205 WIZO95785 1651 aa19.3■□□□□ 0.68
CDRT4-203ENST00000524205 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
CDRT4-203ENST00000524205 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
CDRT4-203ENST00000524205 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
CDRT4-203ENST00000524205 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
CDRT4-203ENST00000524205 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
CDRT4-203ENST00000524205 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
CDRT4-203ENST00000524205 MSH5O43196 834 aa19.07■□□□□ 0.64
CDRT4-203ENST00000524205 NESP48681 1621 aa18.96■□□□□ 0.63
CDRT4-203ENST00000524205 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
CDRT4-203ENST00000524205 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
CDRT4-203ENST00000524205 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
CDRT4-203ENST00000524205 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
CDRT4-203ENST00000524205 KCNA4P22459 653 aa18.74■□□□□ 0.59
CDRT4-203ENST00000524205 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
CDRT4-203ENST00000524205 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
CDRT4-203ENST00000524205 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
CDRT4-203ENST00000524205 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
CDRT4-203ENST00000524205 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
CDRT4-203ENST00000524205 CFTRP13569 1480 aa18.61■□□□□ 0.57
CDRT4-203ENST00000524205 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
CDRT4-203ENST00000524205 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
CDRT4-203ENST00000524205 THOC2Q8NI27 1593 aaKnown RBP18.55■□□□□ 0.56
CDRT4-203ENST00000524205 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
CDRT4-203ENST00000524205 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
CDRT4-203ENST00000524205 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
CDRT4-203ENST00000524205 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
CDRT4-203ENST00000524205 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
CDRT4-203ENST00000524205 CUX2O14529 1486 aa18.37■□□□□ 0.53
CDRT4-203ENST00000524205 WDR62O43379 1518 aa18.37■□□□□ 0.53
CDRT4-203ENST00000524205 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
CDRT4-203ENST00000524205 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
CDRT4-203ENST00000524205 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
CDRT4-203ENST00000524205 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
CDRT4-203ENST00000524205 CUX1P39880 1505 aa18.23■□□□□ 0.51
CDRT4-203ENST00000524205 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
CDRT4-203ENST00000524205 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
CDRT4-203ENST00000524205 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
CDRT4-203ENST00000524205 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
CDRT4-203ENST00000524205 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
CDRT4-203ENST00000524205 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
CDRT4-203ENST00000524205 MAPK8IP2Q13387 824 aaPredicted RBP18.12■□□□□ 0.49
CDRT4-203ENST00000524205 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
CDRT4-203ENST00000524205 TARBP1Q13395 1621 aaKnown RBP18.07■□□□□ 0.48
CDRT4-203ENST00000524205 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
CDRT4-203ENST00000524205 SOGA1O94964 1423 aa18.04■□□□□ 0.48
CDRT4-203ENST00000524205 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
CDRT4-203ENST00000524205 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDRT4-203ENST00000524205 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
CDRT4-203ENST00000524205 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
CDRT4-203ENST00000524205 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
CDRT4-203ENST00000524205 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
CDRT4-203ENST00000524205 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
CDRT4-203ENST00000524205 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
CDRT4-203ENST00000524205 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
CDRT4-203ENST00000524205 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
CDRT4-203ENST00000524205 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
CDRT4-203ENST00000524205 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
CDRT4-203ENST00000524205 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.45
CDRT4-203ENST00000524205 CHD1O14646 1710 aa17.83■□□□□ 0.44
CDRT4-203ENST00000524205 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
CDRT4-203ENST00000524205 FBLN2P98095 1184 aa17.82■□□□□ 0.44
CDRT4-203ENST00000524205 GRIN2BQ13224 1484 aa17.77■□□□□ 0.44
CDRT4-203ENST00000524205 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
CDRT4-203ENST00000524205 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
CDRT4-203ENST00000524205 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
CDRT4-203ENST00000524205 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
CDRT4-203ENST00000524205 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
CDRT4-203ENST00000524205 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms