RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
CCDC66-202ENST00000341455 CHIC1Q5VXU3 224 aa11.94□□□□□ -0.5
CCDC66-202ENST00000341455 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
CCDC66-202ENST00000341455 PHF23Q9BUL5 403 aaPredicted RBP10.6□□□□□ -0.71
CCDC66-202ENST00000341455 FOXD1Q16676 465 aa10.07□□□□□ -0.8
CCDC66-202ENST00000341455 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
CCDC66-202ENST00000341455 MSH5O43196 834 aa9.82□□□□□ -0.84
CCDC66-202ENST00000341455 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
CCDC66-202ENST00000341455 PLPPR3Q6T4P5 718 aa9.25□□□□□ -0.93
CCDC66-202ENST00000341455 PPP6R1Q9UPN7 881 aa9□□□□□ -0.97
CCDC66-202ENST00000341455 NISCHQ9Y2I1 1504 aa8.98□□□□□ -0.97
CCDC66-202ENST00000341455 ADRA2BP18089 450 aa8.94□□□□□ -0.98
CCDC66-202ENST00000341455 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
CCDC66-202ENST00000341455 DMRT2Q9Y5R5 561 aa8.64□□□□□ -1.03
CCDC66-202ENST00000341455 SCAF1Q9H7N4 1312 aaKnown RBP8.57□□□□□ -1.04
CCDC66-202ENST00000341455 CACNB1Q02641 598 aaPredicted RBP8.4□□□□□ -1.06
CCDC66-202ENST00000341455 DNAJC5BQ9UF47 199 aa8.35□□□□□ -1.07
CCDC66-202ENST00000341455 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
CCDC66-202ENST00000341455 HOXD11P31277 338 aaPredicted RBP8.23□□□□□ -1.09
CCDC66-202ENST00000341455 RNF39Q9H2S5 420 aa8.23□□□□□ -1.09
CCDC66-202ENST00000341455 SHROOM4Q9ULL8 1493 aa8.22□□□□□ -1.09
CCDC66-202ENST00000341455 C1QBPQ07021 282 aaKnown RBP8.2□□□□□ -1.1
CCDC66-202ENST00000341455 MYO15BQ96JP2 1530 aa8.14□□□□□ -1.11
CCDC66-202ENST00000341455 RB1CC1Q8TDY2 1594 aa8.11□□□□□ -1.11
CCDC66-202ENST00000341455 ABCC9O60706 1549 aa8.1□□□□□ -1.11
CCDC66-202ENST00000341455 RNF216Q9NWF9 866 aaPredicted RBP8.07□□□□□ -1.12
CCDC66-202ENST00000341455 NACADO15069 1562 aa8.07□□□□□ -1.12
CCDC66-202ENST00000341455 CNKSR2Q8WXI2 1034 aa8.02□□□□□ -1.13
CCDC66-202ENST00000341455 PPP4R3CPQ6ZMV5 832 aa7.96□□□□□ -1.13
CCDC66-202ENST00000341455 UNC13AQ9UPW8 1703 aa7.95□□□□□ -1.14
CCDC66-202ENST00000341455 DCAF8L1A6NGE4 600 aa7.93□□□□□ -1.14
CCDC66-202ENST00000341455 BICRAQ9NZM4 1560 aa7.85□□□□□ -1.15
CCDC66-202ENST00000341455 DCAF1Q9Y4B6 1507 aa7.82□□□□□ -1.16
CCDC66-202ENST00000341455 NCBP3Q53F19 620 aaKnown RBP7.73□□□□□ -1.17
CCDC66-202ENST00000341455 POTEHQ6S545 545 aa7.72□□□□□ -1.17
CCDC66-202ENST00000341455 CUX2O14529 1486 aa7.7□□□□□ -1.18
CCDC66-202ENST00000341455 DNAJC5Q9H3Z4 198 aa7.65□□□□□ -1.18
CCDC66-202ENST00000341455 CC2D2AQ9P2K1 1620 aa7.64□□□□□ -1.19
CCDC66-202ENST00000341455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.64□□□□□ -1.198e-6■□□□□ 10.7
CCDC66-202ENST00000341455 EIF4G1Q04637 1599 aaKnown RBP7.6□□□□□ -1.19
CCDC66-202ENST00000341455 APLP2Q06481 763 aa7.58□□□□□ -1.2
CCDC66-202ENST00000341455 CECR2Q9BXF3 1484 aa7.53□□□□□ -1.2
CCDC66-202ENST00000341455 DSG3P32926 999 aa7.52□□□□□ -1.21
CCDC66-202ENST00000341455 ZCCHC6Q5VYS8 1495 aaKnown RBP7.46□□□□□ -1.22
CCDC66-202ENST00000341455 U3KPZ7 1027 aaPredicted RBP7.45□□□□□ -1.22
CCDC66-202ENST00000341455 HMGXB3Q12766 1538 aa7.41□□□□□ -1.22
CCDC66-202ENST00000341455 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
CCDC66-202ENST00000341455 NPM3O75607 178 aaKnown RBP7.39□□□□□ -1.23
CCDC66-202ENST00000341455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
CCDC66-202ENST00000341455 HNRNPUL2Q1KMD3 747 aaKnown RBP7.39□□□□□ -1.23
CCDC66-202ENST00000341455 SMARCA2P51531 1590 aa7.38□□□□□ -1.23
CCDC66-202ENST00000341455 ZNF219Q9P2Y4 722 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-202ENST00000341455 RBM42Q9BTD8 480 aaKnown RBP7.37□□□□□ -1.23
CCDC66-202ENST00000341455 CAPN15O75808 1086 aa7.37□□□□□ -1.23
CCDC66-202ENST00000341455 PEG3Q9GZU2 1588 aa7.35□□□□□ -1.23
CCDC66-202ENST00000341455 NCAPD3P42695 1498 aa7.33□□□□□ -1.24
CCDC66-202ENST00000341455 LAMC3Q9Y6N6 1575 aa7.3□□□□□ -1.24
CCDC66-202ENST00000341455 SPINK5Q9NQ38 1064 aaPredicted RBP7.29□□□□□ -1.24
CCDC66-202ENST00000341455 SAMD1Q6SPF0 538 aaPredicted RBP7.26□□□□□ -1.25
CCDC66-202ENST00000341455 WDR62O43379 1518 aa7.22□□□□□ -1.25
CCDC66-202ENST00000341455 SCRIBQ14160 1630 aa7.2□□□□□ -1.26
CCDC66-202ENST00000341455 PABPN1Q86U42 306 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC66-202ENST00000341455 PRDM2Q13029 1718 aa7.16□□□□□ -1.26
CCDC66-202ENST00000341455 CHRDL2Q6WN34 429 aa7.14□□□□□ -1.27
CCDC66-202ENST00000341455 WDR97A6NE52 1622 aa7.14□□□□□ -1.27
CCDC66-202ENST00000341455 BAZ1AQ9NRL2 1556 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-202ENST00000341455 SMARCA4P51532 1647 aa7.13□□□□□ -1.27
CCDC66-202ENST00000341455 SLC4A2P04920 1241 aa7.13□□□□□ -1.27
CCDC66-202ENST00000341455 SP7Q8TDD2 431 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-202ENST00000341455 KIF21AQ7Z4S6 1674 aa7.12□□□□□ -1.27
CCDC66-202ENST00000341455 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
CCDC66-202ENST00000341455 AKT1S1Q96B36 256 aa7.1□□□□□ -1.27
CCDC66-202ENST00000341455 ZBTB12Q9Y330 459 aaPredicted RBP7.1□□□□□ -1.27
CCDC66-202ENST00000341455 TRHP20396 242 aaPredicted RBP7.09□□□□□ -1.27
CCDC66-202ENST00000341455 ERCC6Q03468 1493 aa7.09□□□□□ -1.28
CCDC66-202ENST00000341455 MRC2Q9UBG0 1479 aa7.07□□□□□ -1.28
CCDC66-202ENST00000341455 ABCB7O75027 752 aa7.04□□□□□ -1.28
CCDC66-202ENST00000341455 PDS5BQ9NTI5 1447 aa7.03□□□□□ -1.28
CCDC66-202ENST00000341455 RIMBP3CA6NJZ7 1639 aa7.02□□□□□ -1.29
CCDC66-202ENST00000341455 RIMBP3BA6NNM3 1639 aa7.02□□□□□ -1.29
CCDC66-202ENST00000341455 RIMBP3Q9UFD9 1639 aa7.02□□□□□ -1.29
CCDC66-202ENST00000341455 MYCNP04198 464 aaPredicted RBP7□□□□□ -1.29
CCDC66-202ENST00000341455 RSF1Q96T23 1441 aaPredicted RBP6.96□□□□□ -1.3
CCDC66-202ENST00000341455 BAZ1BQ9UIG0 1483 aaKnown RBP6.94□□□□□ -1.3
CCDC66-202ENST00000341455 FXR2P51116 673 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC66-202ENST00000341455 NESP48681 1621 aa6.91□□□□□ -1.3
CCDC66-202ENST00000341455 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.3
CCDC66-202ENST00000341455 EHMT2Q96KQ7 1210 aa6.9□□□□□ -1.3
CCDC66-202ENST00000341455 POLA2Q14181 598 aa6.89□□□□□ -1.31
CCDC66-202ENST00000341455 CLASP1Q7Z460 1538 aa6.89□□□□□ -1.31
CCDC66-202ENST00000341455 REM2Q8IYK8 340 aaPredicted RBP6.89□□□□□ -1.31
CCDC66-202ENST00000341455 ARHGEF11O15085 1522 aa6.89□□□□□ -1.31
CCDC66-202ENST00000341455 ABCC8Q09428 1581 aa6.88□□□□□ -1.31
CCDC66-202ENST00000341455 CADPSQ9ULU8 1353 aa6.88□□□□□ -1.31
CCDC66-202ENST00000341455 CEP164Q9UPV0 1460 aa6.87□□□□□ -1.31
CCDC66-202ENST00000341455 CFTRP13569 1480 aa6.87□□□□□ -1.31
CCDC66-202ENST00000341455 IFT140Q96RY7 1462 aa6.87□□□□□ -1.31
CCDC66-202ENST00000341455 TARBP1Q13395 1621 aaKnown RBP6.82□□□□□ -1.32
CCDC66-202ENST00000341455 CHD1O14646 1710 aa6.82□□□□□ -1.32
CCDC66-202ENST00000341455 CLCN6P51797 869 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms