RNA–Protein interactions for RNA: ENST00000522212.6

TVP23C-CDRT4-203, Transcript of TVP23C-CDRT4 readthrough, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23C-CDRT4, Length 2,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-203ENST00000522212 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
TVP23C-CDRT4-203ENST00000522212 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
TVP23C-CDRT4-203ENST00000522212 HRCP23327 699 aa22.52■■□□□ 1.2
TVP23C-CDRT4-203ENST00000522212 PPARGC1BQ86YN6 1023 aaKnown RBP22.28■■□□□ 1.16
TVP23C-CDRT4-203ENST00000522212 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
TVP23C-CDRT4-203ENST00000522212 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
TVP23C-CDRT4-203ENST00000522212 MYT1Q01538 1121 aa21.88■■□□□ 1.09
TVP23C-CDRT4-203ENST00000522212 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
TVP23C-CDRT4-203ENST00000522212 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
TVP23C-CDRT4-203ENST00000522212 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
TVP23C-CDRT4-203ENST00000522212 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
TVP23C-CDRT4-203ENST00000522212 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
TVP23C-CDRT4-203ENST00000522212 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
TVP23C-CDRT4-203ENST00000522212 ACIN1Q9UKV3 1341 aaKnown RBP20.98■□□□□ 0.95
TVP23C-CDRT4-203ENST00000522212 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
TVP23C-CDRT4-203ENST00000522212 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
TVP23C-CDRT4-203ENST00000522212 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
TVP23C-CDRT4-203ENST00000522212 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
TVP23C-CDRT4-203ENST00000522212 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
TVP23C-CDRT4-203ENST00000522212 BCL11AQ9H165 835 aa20.68■□□□□ 0.9
TVP23C-CDRT4-203ENST00000522212 TTBK1Q5TCY1 1321 aaPredicted RBP20.65■□□□□ 0.9
TVP23C-CDRT4-203ENST00000522212 LOC105371045A0A1W2PR82 267 aa20.65■□□□□ 0.9
TVP23C-CDRT4-203ENST00000522212 CENPBP07199 599 aaPredicted RBP20.6■□□□□ 0.89
TVP23C-CDRT4-203ENST00000522212 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-CDRT4-203ENST00000522212 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
TVP23C-CDRT4-203ENST00000522212 PRKCSHP14314 528 aaPredicted RBP20.38■□□□□ 0.85
TVP23C-CDRT4-203ENST00000522212 NACADO15069 1562 aa20.33■□□□□ 0.84
TVP23C-CDRT4-203ENST00000522212 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
TVP23C-CDRT4-203ENST00000522212 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
TVP23C-CDRT4-203ENST00000522212 ABCC9O60706 1549 aa20.25■□□□□ 0.83
TVP23C-CDRT4-203ENST00000522212 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
TVP23C-CDRT4-203ENST00000522212 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
TVP23C-CDRT4-203ENST00000522212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
TVP23C-CDRT4-203ENST00000522212 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
TVP23C-CDRT4-203ENST00000522212 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
TVP23C-CDRT4-203ENST00000522212 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
TVP23C-CDRT4-203ENST00000522212 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
TVP23C-CDRT4-203ENST00000522212 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
TVP23C-CDRT4-203ENST00000522212 TSHZ2Q9NRE2 1034 aa19.8■□□□□ 0.76
TVP23C-CDRT4-203ENST00000522212 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
TVP23C-CDRT4-203ENST00000522212 MIER1Q8N108 512 aa19.73■□□□□ 0.75
TVP23C-CDRT4-203ENST00000522212 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
TVP23C-CDRT4-203ENST00000522212 SUPT16HQ9Y5B9 1047 aaKnown RBP19.69■□□□□ 0.74
TVP23C-CDRT4-203ENST00000522212 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
TVP23C-CDRT4-203ENST00000522212 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
TVP23C-CDRT4-203ENST00000522212 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
TVP23C-CDRT4-203ENST00000522212 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
TVP23C-CDRT4-203ENST00000522212 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
TVP23C-CDRT4-203ENST00000522212 WIZO95785 1651 aa19.49■□□□□ 0.71
TVP23C-CDRT4-203ENST00000522212 APLP2Q06481 763 aa19.48■□□□□ 0.71
TVP23C-CDRT4-203ENST00000522212 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
TVP23C-CDRT4-203ENST00000522212 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
TVP23C-CDRT4-203ENST00000522212 BCANQ96GW7 911 aa19.42■□□□□ 0.7
TVP23C-CDRT4-203ENST00000522212 ANO8Q9HCE9 1232 aaPredicted RBP19.41■□□□□ 0.7
TVP23C-CDRT4-203ENST00000522212 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
TVP23C-CDRT4-203ENST00000522212 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
TVP23C-CDRT4-203ENST00000522212 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.69
TVP23C-CDRT4-203ENST00000522212 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
TVP23C-CDRT4-203ENST00000522212 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
TVP23C-CDRT4-203ENST00000522212 MSH5O43196 834 aa19.2■□□□□ 0.66
TVP23C-CDRT4-203ENST00000522212 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
TVP23C-CDRT4-203ENST00000522212 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.65
TVP23C-CDRT4-203ENST00000522212 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
TVP23C-CDRT4-203ENST00000522212 FKBP8Q14318 412 aa19.1■□□□□ 0.65
TVP23C-CDRT4-203ENST00000522212 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
TVP23C-CDRT4-203ENST00000522212 DEKP35659 375 aaKnown RBP19.09■□□□□ 0.65
TVP23C-CDRT4-203ENST00000522212 ITGAEP38570 1179 aa19.08■□□□□ 0.64
TVP23C-CDRT4-203ENST00000522212 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
TVP23C-CDRT4-203ENST00000522212 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
TVP23C-CDRT4-203ENST00000522212 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.92■□□□□ 0.62
TVP23C-CDRT4-203ENST00000522212 KCNH8Q96L42 1107 aa18.91■□□□□ 0.62
TVP23C-CDRT4-203ENST00000522212 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
TVP23C-CDRT4-203ENST00000522212 NEFLP07196 543 aa18.86■□□□□ 0.61
TVP23C-CDRT4-203ENST00000522212 RTN4Q9NQC3 1192 aaKnown RBP18.85■□□□□ 0.61
TVP23C-CDRT4-203ENST00000522212 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
TVP23C-CDRT4-203ENST00000522212 UBE2Q2Q8WVN8 375 aa18.84■□□□□ 0.61
TVP23C-CDRT4-203ENST00000522212 ABCC8Q09428 1581 aa18.83■□□□□ 0.61
TVP23C-CDRT4-203ENST00000522212 NBR1Q14596 966 aa18.81■□□□□ 0.6
TVP23C-CDRT4-203ENST00000522212 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
TVP23C-CDRT4-203ENST00000522212 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
TVP23C-CDRT4-203ENST00000522212 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
TVP23C-CDRT4-203ENST00000522212 EEA1Q15075 1411 aa18.74■□□□□ 0.59
TVP23C-CDRT4-203ENST00000522212 IL27Q8NEV9 243 aa18.74■□□□□ 0.59
TVP23C-CDRT4-203ENST00000522212 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
TVP23C-CDRT4-203ENST00000522212 ERICH6BQ5W0A0 696 aa18.71■□□□□ 0.59
TVP23C-CDRT4-203ENST00000522212 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
TVP23C-CDRT4-203ENST00000522212 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
TVP23C-CDRT4-203ENST00000522212 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
TVP23C-CDRT4-203ENST00000522212 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
TVP23C-CDRT4-203ENST00000522212 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-CDRT4-203ENST00000522212 EIF5BO60841 1220 aaKnown RBP18.57■□□□□ 0.56
TVP23C-CDRT4-203ENST00000522212 SOGA1O94964 1423 aa18.56■□□□□ 0.56
TVP23C-CDRT4-203ENST00000522212 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
TVP23C-CDRT4-203ENST00000522212 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
TVP23C-CDRT4-203ENST00000522212 CEP162Q5TB80 1403 aa18.52■□□□□ 0.56
TVP23C-CDRT4-203ENST00000522212 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 KIF21BO75037 1637 aa18.51■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 NOP58Q9Y2X3 529 aaKnown RBP18.5■□□□□ 0.55
TVP23C-CDRT4-203ENST00000522212 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms