RNA–Protein interactions for RNA: ENST00000498122.4

CHEK1-205, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-205ENST00000498122 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
CHEK1-205ENST00000498122 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
CHEK1-205ENST00000498122 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CHEK1-205ENST00000498122 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
CHEK1-205ENST00000498122 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
CHEK1-205ENST00000498122 ABCC9O60706 1549 aa18.56■□□□□ 0.56
CHEK1-205ENST00000498122 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
CHEK1-205ENST00000498122 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
CHEK1-205ENST00000498122 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
CHEK1-205ENST00000498122 NACADO15069 1562 aa17.82■□□□□ 0.44
CHEK1-205ENST00000498122 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
CHEK1-205ENST00000498122 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
CHEK1-205ENST00000498122 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
CHEK1-205ENST00000498122 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
CHEK1-205ENST00000498122 FOXD1Q16676 465 aa17.58■□□□□ 0.4
CHEK1-205ENST00000498122 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHEK1-205ENST00000498122 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
CHEK1-205ENST00000498122 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
CHEK1-205ENST00000498122 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
CHEK1-205ENST00000498122 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
CHEK1-205ENST00000498122 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
CHEK1-205ENST00000498122 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
CHEK1-205ENST00000498122 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
CHEK1-205ENST00000498122 MSH5O43196 834 aa16.76■□□□□ 0.27
CHEK1-205ENST00000498122 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
CHEK1-205ENST00000498122 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
CHEK1-205ENST00000498122 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
CHEK1-205ENST00000498122 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
CHEK1-205ENST00000498122 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
CHEK1-205ENST00000498122 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
CHEK1-205ENST00000498122 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
CHEK1-205ENST00000498122 SMARCA2P51531 1590 aa16.44■□□□□ 0.22
CHEK1-205ENST00000498122 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
CHEK1-205ENST00000498122 HMGXB3Q12766 1538 aa16.38■□□□□ 0.21
CHEK1-205ENST00000498122 WIZO95785 1651 aa16.36■□□□□ 0.21
CHEK1-205ENST00000498122 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
CHEK1-205ENST00000498122 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
CHEK1-205ENST00000498122 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
CHEK1-205ENST00000498122 NESP48681 1621 aa16.12■□□□□ 0.17
CHEK1-205ENST00000498122 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
CHEK1-205ENST00000498122 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
CHEK1-205ENST00000498122 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CHEK1-205ENST00000498122 DNAJC5Q9H3Z4 198 aa15.98■□□□□ 0.15
CHEK1-205ENST00000498122 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
CHEK1-205ENST00000498122 CFTRP13569 1480 aa15.97■□□□□ 0.15
CHEK1-205ENST00000498122 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
CHEK1-205ENST00000498122 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
CHEK1-205ENST00000498122 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
CHEK1-205ENST00000498122 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
CHEK1-205ENST00000498122 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
CHEK1-205ENST00000498122 CUX2O14529 1486 aa15.79■□□□□ 0.12
CHEK1-205ENST00000498122 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
CHEK1-205ENST00000498122 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
CHEK1-205ENST00000498122 ADRA2BP18089 450 aa15.75■□□□□ 0.11
CHEK1-205ENST00000498122 MRC2Q9UBG0 1479 aa15.74■□□□□ 0.11
CHEK1-205ENST00000498122 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
CHEK1-205ENST00000498122 WDR62O43379 1518 aa15.68■□□□□ 0.1
CHEK1-205ENST00000498122 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
CHEK1-205ENST00000498122 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
CHEK1-205ENST00000498122 TOPBP1Q92547 1522 aa15.6■□□□□ 0.09
CHEK1-205ENST00000498122 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
CHEK1-205ENST00000498122 CUX1P39880 1505 aa15.53■□□□□ 0.08
CHEK1-205ENST00000498122 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
CHEK1-205ENST00000498122 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
CHEK1-205ENST00000498122 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
CHEK1-205ENST00000498122 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.06
CHEK1-205ENST00000498122 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.06
CHEK1-205ENST00000498122 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
CHEK1-205ENST00000498122 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
CHEK1-205ENST00000498122 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
CHEK1-205ENST00000498122 SOGA1O94964 1423 aa15.42■□□□□ 0.06
CHEK1-205ENST00000498122 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
CHEK1-205ENST00000498122 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
CHEK1-205ENST00000498122 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHEK1-205ENST00000498122 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
CHEK1-205ENST00000498122 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
CHEK1-205ENST00000498122 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
CHEK1-205ENST00000498122 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
CHEK1-205ENST00000498122 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
CHEK1-205ENST00000498122 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
CHEK1-205ENST00000498122 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
CHEK1-205ENST00000498122 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
CHEK1-205ENST00000498122 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
CHEK1-205ENST00000498122 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
CHEK1-205ENST00000498122 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
CHEK1-205ENST00000498122 FBLN2P98095 1184 aa15.11■□□□□ 0.01
CHEK1-205ENST00000498122 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
CHEK1-205ENST00000498122 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
CHEK1-205ENST00000498122 IGF1RP08069 1367 aa15.11■□□□□ 0.01
CHEK1-205ENST00000498122 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
CHEK1-205ENST00000498122 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
CHEK1-205ENST00000498122 SYNJ2O15056 1496 aa15.08■□□□□ 0.01
CHEK1-205ENST00000498122 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
CHEK1-205ENST00000498122 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
CHEK1-205ENST00000498122 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
CHEK1-205ENST00000498122 ADAMTS12P58397 1594 aa15.05■□□□□ -0
CHEK1-205ENST00000498122 CHD1O14646 1710 aa15.03■□□□□ -0
CHEK1-205ENST00000498122 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
CHEK1-205ENST00000498122 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
CHEK1-205ENST00000498122 NUP160Q12769 1436 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms