RNA–Protein interactions for RNA: ENST00000453558.1

HCG17-214, Transcript of HLA complex group 17, humanhuman

TSL 5 BASIC

Gene HCG17, Length 732 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG17-214ENST00000453558 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
HCG17-214ENST00000453558 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
HCG17-214ENST00000453558 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
HCG17-214ENST00000453558 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
HCG17-214ENST00000453558 FOXD1Q16676 465 aa21.48■■□□□ 1.03
HCG17-214ENST00000453558 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
HCG17-214ENST00000453558 MSH5O43196 834 aa20.29■□□□□ 0.84
HCG17-214ENST00000453558 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
HCG17-214ENST00000453558 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
HCG17-214ENST00000453558 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
HCG17-214ENST00000453558 ADRA2BP18089 450 aa19.85■□□□□ 0.77
HCG17-214ENST00000453558 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
HCG17-214ENST00000453558 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
HCG17-214ENST00000453558 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
HCG17-214ENST00000453558 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
HCG17-214ENST00000453558 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
HCG17-214ENST00000453558 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
HCG17-214ENST00000453558 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
HCG17-214ENST00000453558 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
HCG17-214ENST00000453558 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
HCG17-214ENST00000453558 RNF39Q9H2S5 420 aa17.23■□□□□ 0.35
HCG17-214ENST00000453558 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
HCG17-214ENST00000453558 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
HCG17-214ENST00000453558 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
HCG17-214ENST00000453558 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
HCG17-214ENST00000453558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■□□□ 11.6
HCG17-214ENST00000453558 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
HCG17-214ENST00000453558 KCNA4P22459 653 aa16.32■□□□□ 0.2
HCG17-214ENST00000453558 CAPN15O75808 1086 aa16.14■□□□□ 0.17
HCG17-214ENST00000453558 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
HCG17-214ENST00000453558 DSG3P32926 999 aa16.07■□□□□ 0.16
HCG17-214ENST00000453558 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
HCG17-214ENST00000453558 APLP2Q06481 763 aa16.06■□□□□ 0.16
HCG17-214ENST00000453558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
HCG17-214ENST00000453558 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
HCG17-214ENST00000453558 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
HCG17-214ENST00000453558 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
HCG17-214ENST00000453558 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
HCG17-214ENST00000453558 ABCB7O75027 752 aa15.69■□□□□ 0.1
HCG17-214ENST00000453558 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
HCG17-214ENST00000453558 POTEHQ6S545 545 aa15.61■□□□□ 0.09
HCG17-214ENST00000453558 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
HCG17-214ENST00000453558 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
HCG17-214ENST00000453558 POLA2Q14181 598 aa15.37■□□□□ 0.05
HCG17-214ENST00000453558 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
HCG17-214ENST00000453558 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
HCG17-214ENST00000453558 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
HCG17-214ENST00000453558 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
HCG17-214ENST00000453558 AKT1S1Q96B36 256 aa15.03■□□□□ -0
HCG17-214ENST00000453558 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
HCG17-214ENST00000453558 ZBTB22O15209 634 aa14.96□□□□□ -0.01
HCG17-214ENST00000453558 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
HCG17-214ENST00000453558 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
HCG17-214ENST00000453558 FBLN2P98095 1184 aa14.72□□□□□ -0.05
HCG17-214ENST00000453558 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
HCG17-214ENST00000453558 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
HCG17-214ENST00000453558 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
HCG17-214ENST00000453558 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
HCG17-214ENST00000453558 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
HCG17-214ENST00000453558 FXR2P51116 673 aaKnown RBP eCLIP14.59□□□□□ -0.07
HCG17-214ENST00000453558 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
HCG17-214ENST00000453558 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
HCG17-214ENST00000453558 HAX1O00165 279 aa14.44□□□□□ -0.1
HCG17-214ENST00000453558 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
HCG17-214ENST00000453558 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
HCG17-214ENST00000453558 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
HCG17-214ENST00000453558 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
HCG17-214ENST00000453558 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
HCG17-214ENST00000453558 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
HCG17-214ENST00000453558 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
HCG17-214ENST00000453558 EVX2Q03828 476 aa14.14□□□□□ -0.15
HCG17-214ENST00000453558 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
HCG17-214ENST00000453558 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
HCG17-214ENST00000453558 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
HCG17-214ENST00000453558 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
HCG17-214ENST00000453558 GABBR2O75899 941 aa13.92□□□□□ -0.18
HCG17-214ENST00000453558 FARP1Q9Y4F1 1045 aaPredicted RBP13.88□□□□□ -0.19
HCG17-214ENST00000453558 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
HCG17-214ENST00000453558 CLCN6P51797 869 aa13.85□□□□□ -0.19
HCG17-214ENST00000453558 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
HCG17-214ENST00000453558 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
HCG17-214ENST00000453558 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
HCG17-214ENST00000453558 LHX8Q68G74 356 aa13.66□□□□□ -0.22
HCG17-214ENST00000453558 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
HCG17-214ENST00000453558 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
HCG17-214ENST00000453558 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
HCG17-214ENST00000453558 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
HCG17-214ENST00000453558 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
HCG17-214ENST00000453558 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
HCG17-214ENST00000453558 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
HCG17-214ENST00000453558 PROM2Q8N271 834 aa13.44□□□□□ -0.26
HCG17-214ENST00000453558 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
HCG17-214ENST00000453558 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
HCG17-214ENST00000453558 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
HCG17-214ENST00000453558 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
HCG17-214ENST00000453558 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
HCG17-214ENST00000453558 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
HCG17-214ENST00000453558 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
HCG17-214ENST00000453558 MIER1Q8N108 512 aa13.15□□□□□ -0.3
HCG17-214ENST00000453558 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms