RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
PLXNB1-201ENST00000296440 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
PLXNB1-201ENST00000296440 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
PLXNB1-201ENST00000296440 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
PLXNB1-201ENST00000296440 APLP2Q06481 763 aa21.06■□□□□ 0.96
PLXNB1-201ENST00000296440 PELP1Q8IZL8 1130 aaKnown RBP20.91■□□□□ 0.94
PLXNB1-201ENST00000296440 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
PLXNB1-201ENST00000296440 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
PLXNB1-201ENST00000296440 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.88
PLXNB1-201ENST00000296440 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.88
PLXNB1-201ENST00000296440 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
PLXNB1-201ENST00000296440 ERICH6Q7L0X2 663 aa20.25■□□□□ 0.83
PLXNB1-201ENST00000296440 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
PLXNB1-201ENST00000296440 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
PLXNB1-201ENST00000296440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
PLXNB1-201ENST00000296440 HNRNPUL2Q1KMD3 747 aaKnown RBP19.99■□□□□ 0.79
PLXNB1-201ENST00000296440 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
PLXNB1-201ENST00000296440 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
PLXNB1-201ENST00000296440 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
PLXNB1-201ENST00000296440 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
PLXNB1-201ENST00000296440 POLR3GLQ9BT43 218 aa19.76■□□□□ 0.75
PLXNB1-201ENST00000296440 NEFLP07196 543 aa19.63■□□□□ 0.73
PLXNB1-201ENST00000296440 DAXXQ9UER7 740 aaPredicted RBP19.56■□□□□ 0.72
PLXNB1-201ENST00000296440 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
PLXNB1-201ENST00000296440 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
PLXNB1-201ENST00000296440 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
PLXNB1-201ENST00000296440 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
PLXNB1-201ENST00000296440 BCANQ96GW7 911 aa19.39■□□□□ 0.69
PLXNB1-201ENST00000296440 ITGAEP38570 1179 aa19.38■□□□□ 0.69
PLXNB1-201ENST00000296440 MYT1Q01538 1121 aa19.28■□□□□ 0.68
PLXNB1-201ENST00000296440 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.67
PLXNB1-201ENST00000296440 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
PLXNB1-201ENST00000296440 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
PLXNB1-201ENST00000296440 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
PLXNB1-201ENST00000296440 FBLN2P98095 1184 aa19.11■□□□□ 0.65
PLXNB1-201ENST00000296440 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
PLXNB1-201ENST00000296440 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
PLXNB1-201ENST00000296440 ESF1Q9H501 851 aaKnown RBP19.03■□□□□ 0.64
PLXNB1-201ENST00000296440 BCL11AQ9H165 835 aa19.02■□□□□ 0.64
PLXNB1-201ENST00000296440 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
PLXNB1-201ENST00000296440 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
PLXNB1-201ENST00000296440 NEFMP07197 916 aa18.84■□□□□ 0.61
PLXNB1-201ENST00000296440 A0A0G2JS52 829 aa18.82■□□□□ 0.6
PLXNB1-201ENST00000296440 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
PLXNB1-201ENST00000296440 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.6
PLXNB1-201ENST00000296440 STAG3Q9UJ98 1225 aa18.77■□□□□ 0.6
PLXNB1-201ENST00000296440 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
PLXNB1-201ENST00000296440 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
PLXNB1-201ENST00000296440 NPM1P06748 294 aaKnown RBP eCLIP18.61■□□□□ 0.57
PLXNB1-201ENST00000296440 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.572e-7■■□□□ 13.4
PLXNB1-201ENST00000296440 CHGAP10645 457 aaKnown RBP18.54■□□□□ 0.56
PLXNB1-201ENST00000296440 ARID3CA6NKF2 412 aa18.52■□□□□ 0.56
PLXNB1-201ENST00000296440 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
PLXNB1-201ENST00000296440 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
PLXNB1-201ENST00000296440 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
PLXNB1-201ENST00000296440 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
PLXNB1-201ENST00000296440 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
PLXNB1-201ENST00000296440 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
PLXNB1-201ENST00000296440 HAP1P54257 671 aaPredicted RBP18.39■□□□□ 0.53
PLXNB1-201ENST00000296440 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
PLXNB1-201ENST00000296440 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
PLXNB1-201ENST00000296440 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
PLXNB1-201ENST00000296440 ABCC9O60706 1549 aa18.26■□□□□ 0.51
PLXNB1-201ENST00000296440 P3H3Q8IVL6 736 aa18.21■□□□□ 0.51
PLXNB1-201ENST00000296440 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
PLXNB1-201ENST00000296440 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
PLXNB1-201ENST00000296440 ARXQ96QS3 562 aa18.19■□□□□ 0.5
PLXNB1-201ENST00000296440 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-201ENST00000296440 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
PLXNB1-201ENST00000296440 NPHP1O15259 732 aa18.18■□□□□ 0.5
PLXNB1-201ENST00000296440 HSP90AA1P07900 732 aaKnown RBP18.12■□□□□ 0.49
PLXNB1-201ENST00000296440 ANP32CO43423 234 aa18.11■□□□□ 0.49
PLXNB1-201ENST00000296440 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
PLXNB1-201ENST00000296440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.484e-8■□□□□ 10.9
PLXNB1-201ENST00000296440 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
PLXNB1-201ENST00000296440 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
PLXNB1-201ENST00000296440 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
PLXNB1-201ENST00000296440 ANP32BQ92688 251 aaKnown RBP17.99■□□□□ 0.47
PLXNB1-201ENST00000296440 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
PLXNB1-201ENST00000296440 HRCP23327 699 aa17.88■□□□□ 0.45
PLXNB1-201ENST00000296440 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
PLXNB1-201ENST00000296440 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
PLXNB1-201ENST00000296440 AEBP2Q6ZN18 517 aaPredicted RBP17.79■□□□□ 0.44
PLXNB1-201ENST00000296440 MYH16Q9H6N6 1097 aa17.79■□□□□ 0.44
PLXNB1-201ENST00000296440 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
PLXNB1-201ENST00000296440 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
PLXNB1-201ENST00000296440 KCNH8Q96L42 1107 aa17.77■□□□□ 0.44
PLXNB1-201ENST00000296440 CLSTN1O94985 981 aa17.74■□□□□ 0.43
PLXNB1-201ENST00000296440 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
PLXNB1-201ENST00000296440 WDR43Q15061 677 aaKnown RBP eCLIP17.71■□□□□ 0.438e-8■■■■□ 19.9
PLXNB1-201ENST00000296440 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
PLXNB1-201ENST00000296440 KDM2AQ9Y2K7 1162 aa17.7■□□□□ 0.42
PLXNB1-201ENST00000296440 TAOK2Q9UL54 1235 aa17.7■□□□□ 0.42
PLXNB1-201ENST00000296440 TSPY4P0CV99 314 aa17.68■□□□□ 0.42
PLXNB1-201ENST00000296440 TSPY10P0CW01 314 aa17.68■□□□□ 0.42
PLXNB1-201ENST00000296440 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
PLXNB1-201ENST00000296440 ISY1Q9ULR0 285 aaKnown RBP17.65■□□□□ 0.42
PLXNB1-201ENST00000296440 TMC1Q8TDI8 760 aa17.64■□□□□ 0.42
PLXNB1-201ENST00000296440 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
PLXNB1-201ENST00000296440 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms