RNA–Protein interactions for RNA: ENST00000394672.7

CCDC66-203, Transcript of coiled-coil domain containing 66, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC66, Length 3,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-203ENST00000394672 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
CCDC66-203ENST00000394672 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
CCDC66-203ENST00000394672 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
CCDC66-203ENST00000394672 ZCCHC6Q5VYS8 1495 aaKnown RBP15.75■□□□□ 0.11
CCDC66-203ENST00000394672 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
CCDC66-203ENST00000394672 ABCC9O60706 1549 aa15.55■□□□□ 0.08
CCDC66-203ENST00000394672 NACADO15069 1562 aa15.55■□□□□ 0.08
CCDC66-203ENST00000394672 RB1CC1Q8TDY2 1594 aa15.42■□□□□ 0.06
CCDC66-203ENST00000394672 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
CCDC66-203ENST00000394672 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
CCDC66-203ENST00000394672 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
CCDC66-203ENST00000394672 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
CCDC66-203ENST00000394672 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
CCDC66-203ENST00000394672 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
CCDC66-203ENST00000394672 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.09
CCDC66-203ENST00000394672 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
CCDC66-203ENST00000394672 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.09
CCDC66-203ENST00000394672 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC66-203ENST00000394672 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
CCDC66-203ENST00000394672 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
CCDC66-203ENST00000394672 SMARCA2P51531 1590 aa14.35□□□□□ -0.11
CCDC66-203ENST00000394672 HMGXB3Q12766 1538 aa14.33□□□□□ -0.11
CCDC66-203ENST00000394672 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
CCDC66-203ENST00000394672 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
CCDC66-203ENST00000394672 NCAPD3P42695 1498 aa14.27□□□□□ -0.13
CCDC66-203ENST00000394672 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
CCDC66-203ENST00000394672 WIZO95785 1651 aa14.24□□□□□ -0.13
CCDC66-203ENST00000394672 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
CCDC66-203ENST00000394672 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
CCDC66-203ENST00000394672 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
CCDC66-203ENST00000394672 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
CCDC66-203ENST00000394672 LAMC3Q9Y6N6 1575 aa13.89□□□□□ -0.19
CCDC66-203ENST00000394672 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
CCDC66-203ENST00000394672 CFTRP13569 1480 aa13.84□□□□□ -0.19
CCDC66-203ENST00000394672 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
CCDC66-203ENST00000394672 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
CCDC66-203ENST00000394672 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
CCDC66-203ENST00000394672 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
CCDC66-203ENST00000394672 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
CCDC66-203ENST00000394672 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
CCDC66-203ENST00000394672 NESP48681 1621 aa13.6□□□□□ -0.23
CCDC66-203ENST00000394672 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
CCDC66-203ENST00000394672 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
CCDC66-203ENST00000394672 WDR62O43379 1518 aa13.57□□□□□ -0.24
CCDC66-203ENST00000394672 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
CCDC66-203ENST00000394672 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
CCDC66-203ENST00000394672 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
CCDC66-203ENST00000394672 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
CCDC66-203ENST00000394672 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
CCDC66-203ENST00000394672 CUX1P39880 1505 aa13.49□□□□□ -0.25
CCDC66-203ENST00000394672 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
CCDC66-203ENST00000394672 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
CCDC66-203ENST00000394672 TOPBP1Q92547 1522 aa13.46□□□□□ -0.26
CCDC66-203ENST00000394672 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
CCDC66-203ENST00000394672 CUX2O14529 1486 aa13.41□□□□□ -0.26
CCDC66-203ENST00000394672 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
CCDC66-203ENST00000394672 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
CCDC66-203ENST00000394672 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
CCDC66-203ENST00000394672 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
CCDC66-203ENST00000394672 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
CCDC66-203ENST00000394672 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
CCDC66-203ENST00000394672 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
CCDC66-203ENST00000394672 EEA1Q15075 1411 aa13.27□□□□□ -0.28
CCDC66-203ENST00000394672 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
CCDC66-203ENST00000394672 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
CCDC66-203ENST00000394672 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
CCDC66-203ENST00000394672 CUL7Q14999 1698 aa13.22□□□□□ -0.29
CCDC66-203ENST00000394672 EIF4G3O43432 1585 aaKnown RBP13.21□□□□□ -0.29
CCDC66-203ENST00000394672 SOGA1O94964 1423 aa13.21□□□□□ -0.3
CCDC66-203ENST00000394672 KIF21BO75037 1637 aa13.16□□□□□ -0.3
CCDC66-203ENST00000394672 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
CCDC66-203ENST00000394672 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
CCDC66-203ENST00000394672 ADAMTS12P58397 1594 aa13.13□□□□□ -0.31
CCDC66-203ENST00000394672 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
CCDC66-203ENST00000394672 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
CCDC66-203ENST00000394672 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
CCDC66-203ENST00000394672 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
CCDC66-203ENST00000394672 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
CCDC66-203ENST00000394672 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
CCDC66-203ENST00000394672 IGF1RP08069 1367 aa13.03□□□□□ -0.32
CCDC66-203ENST00000394672 FHAD1B1AJZ9 1412 aa13.03□□□□□ -0.32
CCDC66-203ENST00000394672 RUSC2Q8N2Y8 1516 aa13.02□□□□□ -0.32
CCDC66-203ENST00000394672 CTTNBP2Q8WZ74 1663 aa13.01□□□□□ -0.33
CCDC66-203ENST00000394672 SYNJ2O15056 1496 aa13.01□□□□□ -0.33
CCDC66-203ENST00000394672 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■■■■ 61.2
CCDC66-203ENST00000394672 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
CCDC66-203ENST00000394672 CHD1O14646 1710 aa12.99□□□□□ -0.33
CCDC66-203ENST00000394672 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
CCDC66-203ENST00000394672 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
CCDC66-203ENST00000394672 GOLGA3Q08378 1498 aa12.95□□□□□ -0.34
CCDC66-203ENST00000394672 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
CCDC66-203ENST00000394672 NUP160Q12769 1436 aa12.94□□□□□ -0.34
CCDC66-203ENST00000394672 CARMIL1Q5VZK9 1371 aa12.93□□□□□ -0.34
CCDC66-203ENST00000394672 SHROOM2Q13796 1616 aa12.93□□□□□ -0.34
CCDC66-203ENST00000394672 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
CCDC66-203ENST00000394672 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
CCDC66-203ENST00000394672 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
CCDC66-203ENST00000394672 SAMD9Q5K651 1589 aa12.86□□□□□ -0.35
CCDC66-203ENST00000394672 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
CCDC66-203ENST00000394672 KIAA0586Q9BVV6 1533 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms