RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
PPP6R1-204ENST00000587457 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.2
PPP6R1-204ENST00000587457 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
PPP6R1-204ENST00000587457 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
PPP6R1-204ENST00000587457 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
PPP6R1-204ENST00000587457 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
PPP6R1-204ENST00000587457 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
PPP6R1-204ENST00000587457 ABCC9O60706 1549 aa27.14■■□□□ 1.94
PPP6R1-204ENST00000587457 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
PPP6R1-204ENST00000587457 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
PPP6R1-204ENST00000587457 HRCP23327 699 aa26.77■■□□□ 1.88
PPP6R1-204ENST00000587457 NACADO15069 1562 aa26.76■■□□□ 1.87
PPP6R1-204ENST00000587457 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
PPP6R1-204ENST00000587457 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
PPP6R1-204ENST00000587457 PPARGC1BQ86YN6 1023 aaKnown RBP26.21■■□□□ 1.79
PPP6R1-204ENST00000587457 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
PPP6R1-204ENST00000587457 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.77
PPP6R1-204ENST00000587457 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
PPP6R1-204ENST00000587457 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
PPP6R1-204ENST00000587457 PELP1Q8IZL8 1130 aaKnown RBP25.96■■□□□ 1.75
PPP6R1-204ENST00000587457 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
PPP6R1-204ENST00000587457 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.724e-7■■□□□ 14
PPP6R1-204ENST00000587457 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
PPP6R1-204ENST00000587457 WIZO95785 1651 aa25.76■■□□□ 1.72
PPP6R1-204ENST00000587457 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
PPP6R1-204ENST00000587457 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
PPP6R1-204ENST00000587457 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
PPP6R1-204ENST00000587457 TRIM41Q8WV44 630 aa25.39■■□□□ 1.65
PPP6R1-204ENST00000587457 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
PPP6R1-204ENST00000587457 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
PPP6R1-204ENST00000587457 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
PPP6R1-204ENST00000587457 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
PPP6R1-204ENST00000587457 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
PPP6R1-204ENST00000587457 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
PPP6R1-204ENST00000587457 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
PPP6R1-204ENST00000587457 ZEB1P37275 1124 aaPredicted RBP25.15■■□□□ 1.62
PPP6R1-204ENST00000587457 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
PPP6R1-204ENST00000587457 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
PPP6R1-204ENST00000587457 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
PPP6R1-204ENST00000587457 MYT1Q01538 1121 aa24.97■■□□□ 1.59
PPP6R1-204ENST00000587457 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
PPP6R1-204ENST00000587457 EHMT2Q96KQ7 1210 aa24.87■■□□□ 1.57
PPP6R1-204ENST00000587457 NCAPD3P42695 1498 aa24.78■■□□□ 1.56
PPP6R1-204ENST00000587457 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
PPP6R1-204ENST00000587457 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PPP6R1-204ENST00000587457 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
PPP6R1-204ENST00000587457 NEUROD1Q13562 356 aa24.66■■□□□ 1.54
PPP6R1-204ENST00000587457 SOGA1O94964 1423 aa24.63■■□□□ 1.53
PPP6R1-204ENST00000587457 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
PPP6R1-204ENST00000587457 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
PPP6R1-204ENST00000587457 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
PPP6R1-204ENST00000587457 EEA1Q15075 1411 aa24.45■■□□□ 1.5
PPP6R1-204ENST00000587457 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
PPP6R1-204ENST00000587457 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
PPP6R1-204ENST00000587457 CENPBP07199 599 aaPredicted RBP24.39■■□□□ 1.5
PPP6R1-204ENST00000587457 CFTRP13569 1480 aa24.39■■□□□ 1.5
PPP6R1-204ENST00000587457 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
PPP6R1-204ENST00000587457 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
PPP6R1-204ENST00000587457 DIEXFQ68CQ4 756 aaKnown RBP24.26■■□□□ 1.47
PPP6R1-204ENST00000587457 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
PPP6R1-204ENST00000587457 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
PPP6R1-204ENST00000587457 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
PPP6R1-204ENST00000587457 CUX1P39880 1505 aa24.23■■□□□ 1.47
PPP6R1-204ENST00000587457 GOLGA3Q08378 1498 aa24.23■■□□□ 1.47
PPP6R1-204ENST00000587457 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
PPP6R1-204ENST00000587457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.22■■□□□ 1.47
PPP6R1-204ENST00000587457 CCER1Q8TC90 406 aaPredicted RBP24.18■■□□□ 1.46
PPP6R1-204ENST00000587457 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
PPP6R1-204ENST00000587457 KIF21BO75037 1637 aa24.11■■□□□ 1.45
PPP6R1-204ENST00000587457 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
PPP6R1-204ENST00000587457 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
PPP6R1-204ENST00000587457 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
PPP6R1-204ENST00000587457 NESP48681 1621 aa23.98■■□□□ 1.43
PPP6R1-204ENST00000587457 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
PPP6R1-204ENST00000587457 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
PPP6R1-204ENST00000587457 PRXQ9BXM0 1461 aa23.93■■□□□ 1.42
PPP6R1-204ENST00000587457 CLIP1P30622 1438 aa23.92■■□□□ 1.42
PPP6R1-204ENST00000587457 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
PPP6R1-204ENST00000587457 TTBK1Q5TCY1 1321 aaPredicted RBP23.91■■□□□ 1.42
PPP6R1-204ENST00000587457 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
PPP6R1-204ENST00000587457 CUX2O14529 1486 aa23.87■■□□□ 1.41
PPP6R1-204ENST00000587457 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
PPP6R1-204ENST00000587457 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
PPP6R1-204ENST00000587457 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
PPP6R1-204ENST00000587457 ZNF316A6NFI3 1004 aaPredicted RBP23.78■■□□□ 1.4
PPP6R1-204ENST00000587457 IGF1RP08069 1367 aa23.77■■□□□ 1.4
PPP6R1-204ENST00000587457 DNMBPQ6XZF7 1577 aa23.77■■□□□ 1.4
PPP6R1-204ENST00000587457 TOPBP1Q92547 1522 aa23.76■■□□□ 1.39
PPP6R1-204ENST00000587457 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
PPP6R1-204ENST00000587457 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
PPP6R1-204ENST00000587457 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
PPP6R1-204ENST00000587457 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
PPP6R1-204ENST00000587457 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
PPP6R1-204ENST00000587457 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
PPP6R1-204ENST00000587457 MIER1Q8N108 512 aa23.64■■□□□ 1.38
PPP6R1-204ENST00000587457 ABCA10Q8WWZ4 1543 aa23.63■■□□□ 1.37
PPP6R1-204ENST00000587457 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
PPP6R1-204ENST00000587457 APLP2Q06481 763 aa23.58■■□□□ 1.37
PPP6R1-204ENST00000587457 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
PPP6R1-204ENST00000587457 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms