RNA–Protein interactions for RNA: ENST00000481756.7

TVP23C-CDRT4-201, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 4

Gene TVP23C-CDRT4, Length 556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-201ENST00000481756 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
TVP23C-CDRT4-201ENST00000481756 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
TVP23C-CDRT4-201ENST00000481756 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
TVP23C-CDRT4-201ENST00000481756 ABCC9O60706 1549 aa17.31■□□□□ 0.36
TVP23C-CDRT4-201ENST00000481756 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
TVP23C-CDRT4-201ENST00000481756 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
TVP23C-CDRT4-201ENST00000481756 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-CDRT4-201ENST00000481756 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
TVP23C-CDRT4-201ENST00000481756 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
TVP23C-CDRT4-201ENST00000481756 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
TVP23C-CDRT4-201ENST00000481756 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
TVP23C-CDRT4-201ENST00000481756 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
TVP23C-CDRT4-201ENST00000481756 FOXD1Q16676 465 aa15.73■□□□□ 0.11
TVP23C-CDRT4-201ENST00000481756 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
TVP23C-CDRT4-201ENST00000481756 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
TVP23C-CDRT4-201ENST00000481756 BICRAQ9NZM4 1560 aa15.6■□□□□ 0.09
TVP23C-CDRT4-201ENST00000481756 CUX2O14529 1486 aa15.59■□□□□ 0.09
TVP23C-CDRT4-201ENST00000481756 NACADO15069 1562 aa15.55■□□□□ 0.08
TVP23C-CDRT4-201ENST00000481756 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
TVP23C-CDRT4-201ENST00000481756 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
TVP23C-CDRT4-201ENST00000481756 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
TVP23C-CDRT4-201ENST00000481756 ERCC6Q03468 1493 aa15.02■□□□□ -0
TVP23C-CDRT4-201ENST00000481756 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
TVP23C-CDRT4-201ENST00000481756 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
TVP23C-CDRT4-201ENST00000481756 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
TVP23C-CDRT4-201ENST00000481756 ILDR1Q86SU0 546 aaPredicted RBP14.81□□□□□ -0.04
TVP23C-CDRT4-201ENST00000481756 MSH5O43196 834 aa14.78□□□□□ -0.04
TVP23C-CDRT4-201ENST00000481756 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
TVP23C-CDRT4-201ENST00000481756 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
TVP23C-CDRT4-201ENST00000481756 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
TVP23C-CDRT4-201ENST00000481756 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
TVP23C-CDRT4-201ENST00000481756 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
TVP23C-CDRT4-201ENST00000481756 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
TVP23C-CDRT4-201ENST00000481756 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
TVP23C-CDRT4-201ENST00000481756 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
TVP23C-CDRT4-201ENST00000481756 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
TVP23C-CDRT4-201ENST00000481756 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
TVP23C-CDRT4-201ENST00000481756 NESP48681 1621 aa14.52□□□□□ -0.09
TVP23C-CDRT4-201ENST00000481756 ADRA2BP18089 450 aa14.51□□□□□ -0.09
TVP23C-CDRT4-201ENST00000481756 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
TVP23C-CDRT4-201ENST00000481756 NCAPD3P42695 1498 aa14.43□□□□□ -0.1
TVP23C-CDRT4-201ENST00000481756 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
TVP23C-CDRT4-201ENST00000481756 SMARCA2P51531 1590 aa14.35□□□□□ -0.11
TVP23C-CDRT4-201ENST00000481756 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
TVP23C-CDRT4-201ENST00000481756 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
TVP23C-CDRT4-201ENST00000481756 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
TVP23C-CDRT4-201ENST00000481756 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
TVP23C-CDRT4-201ENST00000481756 WDR62O43379 1518 aa14.2□□□□□ -0.14
TVP23C-CDRT4-201ENST00000481756 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
TVP23C-CDRT4-201ENST00000481756 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
TVP23C-CDRT4-201ENST00000481756 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
TVP23C-CDRT4-201ENST00000481756 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
TVP23C-CDRT4-201ENST00000481756 ATAD2BQ9ULI0 1458 aa14.13□□□□□ -0.15
TVP23C-CDRT4-201ENST00000481756 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
TVP23C-CDRT4-201ENST00000481756 SOCS7O14512 581 aa13.96□□□□□ -0.17
TVP23C-CDRT4-201ENST00000481756 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
TVP23C-CDRT4-201ENST00000481756 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
TVP23C-CDRT4-201ENST00000481756 FBXO41Q8TF61 875 aa13.93□□□□□ -0.18
TVP23C-CDRT4-201ENST00000481756 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
TVP23C-CDRT4-201ENST00000481756 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
TVP23C-CDRT4-201ENST00000481756 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
TVP23C-CDRT4-201ENST00000481756 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
TVP23C-CDRT4-201ENST00000481756 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
TVP23C-CDRT4-201ENST00000481756 ILDR2Q71H61 639 aa13.77□□□□□ -0.21
TVP23C-CDRT4-201ENST00000481756 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
TVP23C-CDRT4-201ENST00000481756 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
TVP23C-CDRT4-201ENST00000481756 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
TVP23C-CDRT4-201ENST00000481756 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
TVP23C-CDRT4-201ENST00000481756 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
TVP23C-CDRT4-201ENST00000481756 URB2Q14146 1524 aaKnown RBP13.67□□□□□ -0.22
TVP23C-CDRT4-201ENST00000481756 CHD1O14646 1710 aa13.64□□□□□ -0.23
TVP23C-CDRT4-201ENST00000481756 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
TVP23C-CDRT4-201ENST00000481756 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
TVP23C-CDRT4-201ENST00000481756 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
TVP23C-CDRT4-201ENST00000481756 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
TVP23C-CDRT4-201ENST00000481756 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
TVP23C-CDRT4-201ENST00000481756 KIF13AQ9H1H9 1805 aa13.52□□□□□ -0.25
TVP23C-CDRT4-201ENST00000481756 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
TVP23C-CDRT4-201ENST00000481756 CFTRP13569 1480 aa13.46□□□□□ -0.25
TVP23C-CDRT4-201ENST00000481756 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
TVP23C-CDRT4-201ENST00000481756 FBLN2P98095 1184 aa13.44□□□□□ -0.26
TVP23C-CDRT4-201ENST00000481756 KDM6BO15054 1643 aa13.39□□□□□ -0.27
TVP23C-CDRT4-201ENST00000481756 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
TVP23C-CDRT4-201ENST00000481756 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
TVP23C-CDRT4-201ENST00000481756 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
TVP23C-CDRT4-201ENST00000481756 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
TVP23C-CDRT4-201ENST00000481756 ABCC10Q5T3U5 1492 aa13.31□□□□□ -0.28
TVP23C-CDRT4-201ENST00000481756 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
TVP23C-CDRT4-201ENST00000481756 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
TVP23C-CDRT4-201ENST00000481756 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
TVP23C-CDRT4-201ENST00000481756 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
TVP23C-CDRT4-201ENST00000481756 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
TVP23C-CDRT4-201ENST00000481756 FAM69CQ0P6D2 419 aa13.25□□□□□ -0.29
TVP23C-CDRT4-201ENST00000481756 DIP2BQ9P265 1576 aa13.21□□□□□ -0.29
TVP23C-CDRT4-201ENST00000481756 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
TVP23C-CDRT4-201ENST00000481756 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
TVP23C-CDRT4-201ENST00000481756 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
TVP23C-CDRT4-201ENST00000481756 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
TVP23C-CDRT4-201ENST00000481756 MAPKBP1O60336 1514 aa13.16□□□□□ -0.3
TVP23C-CDRT4-201ENST00000481756 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms