RNA–Protein interactions for RNA: ENST00000484623.5

CCDC66-220, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-220ENST00000484623 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
CCDC66-220ENST00000484623 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
CCDC66-220ENST00000484623 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
CCDC66-220ENST00000484623 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
CCDC66-220ENST00000484623 PLPPR3Q6T4P5 718 aa24.28■■□□□ 1.48
CCDC66-220ENST00000484623 FOXD1Q16676 465 aa22.85■■□□□ 1.25
CCDC66-220ENST00000484623 ADRA2BP18089 450 aa22.6■■□□□ 1.21
CCDC66-220ENST00000484623 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
CCDC66-220ENST00000484623 KCNA4P22459 653 aa21.8■■□□□ 1.08
CCDC66-220ENST00000484623 PIAS4Q8N2W9 510 aaPredicted RBP21.8■■□□□ 1.08
CCDC66-220ENST00000484623 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
CCDC66-220ENST00000484623 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
CCDC66-220ENST00000484623 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
CCDC66-220ENST00000484623 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
CCDC66-220ENST00000484623 MSH5O43196 834 aa20.88■□□□□ 0.93
CCDC66-220ENST00000484623 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
CCDC66-220ENST00000484623 NPM3O75607 178 aaKnown RBP20.78■□□□□ 0.92
CCDC66-220ENST00000484623 CNKSR2Q8WXI2 1034 aa20.71■□□□□ 0.91
CCDC66-220ENST00000484623 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
CCDC66-220ENST00000484623 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
CCDC66-220ENST00000484623 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
CCDC66-220ENST00000484623 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
CCDC66-220ENST00000484623 ZBTB22O15209 634 aa20.03■□□□□ 0.8
CCDC66-220ENST00000484623 FOXD4L1Q9NU39 408 aa19.92■□□□□ 0.78
CCDC66-220ENST00000484623 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
CCDC66-220ENST00000484623 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
CCDC66-220ENST00000484623 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
CCDC66-220ENST00000484623 MYCNP04198 464 aaPredicted RBP19.26■□□□□ 0.67
CCDC66-220ENST00000484623 ATXN8OSP0DMR3 200 aa19.18■□□□□ 0.66
CCDC66-220ENST00000484623 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
CCDC66-220ENST00000484623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.628e-6■□□□□ 10.7
CCDC66-220ENST00000484623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
CCDC66-220ENST00000484623 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
CCDC66-220ENST00000484623 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
CCDC66-220ENST00000484623 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
CCDC66-220ENST00000484623 FKBP8Q14318 412 aa18.61■□□□□ 0.57
CCDC66-220ENST00000484623 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
CCDC66-220ENST00000484623 APLP2Q06481 763 aa18.45■□□□□ 0.54
CCDC66-220ENST00000484623 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
CCDC66-220ENST00000484623 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
CCDC66-220ENST00000484623 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
CCDC66-220ENST00000484623 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
CCDC66-220ENST00000484623 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
CCDC66-220ENST00000484623 FBLN2P98095 1184 aa17.88■□□□□ 0.45
CCDC66-220ENST00000484623 SPDYE4A6NLX3 237 aa17.86■□□□□ 0.45
CCDC66-220ENST00000484623 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
CCDC66-220ENST00000484623 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
CCDC66-220ENST00000484623 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
CCDC66-220ENST00000484623 CAPN15O75808 1086 aa17.81■□□□□ 0.44
CCDC66-220ENST00000484623 MKRN4PQ13434 485 aaPredicted RBP17.81■□□□□ 0.44
CCDC66-220ENST00000484623 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
CCDC66-220ENST00000484623 POLA2Q14181 598 aa17.76■□□□□ 0.43
CCDC66-220ENST00000484623 PROM2Q8N271 834 aa17.67■□□□□ 0.42
CCDC66-220ENST00000484623 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
CCDC66-220ENST00000484623 POTEDQ86YR6 584 aa17.55■□□□□ 0.4
CCDC66-220ENST00000484623 VASPP50552 380 aaPredicted RBP17.5■□□□□ 0.39
CCDC66-220ENST00000484623 ABCB7O75027 752 aa17.49■□□□□ 0.39
CCDC66-220ENST00000484623 DSG3P32926 999 aa17.29■□□□□ 0.36
CCDC66-220ENST00000484623 IFNLR1Q8IU57 520 aaPredicted RBP17.26■□□□□ 0.35
CCDC66-220ENST00000484623 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
CCDC66-220ENST00000484623 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
CCDC66-220ENST00000484623 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
CCDC66-220ENST00000484623 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
CCDC66-220ENST00000484623 OSCARQ8IYS5 282 aa17.15■□□□□ 0.34
CCDC66-220ENST00000484623 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
CCDC66-220ENST00000484623 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
CCDC66-220ENST00000484623 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
CCDC66-220ENST00000484623 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
CCDC66-220ENST00000484623 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC66-220ENST00000484623 SPOCK2Q92563 424 aa17■□□□□ 0.31
CCDC66-220ENST00000484623 PKD2Q13563 968 aa16.98■□□□□ 0.31
CCDC66-220ENST00000484623 PLCD3Q8N3E9 789 aa16.95■□□□□ 0.3
CCDC66-220ENST00000484623 PLCB2Q00722 1185 aa16.94■□□□□ 0.3
CCDC66-220ENST00000484623 CACNB1Q02641 598 aaPredicted RBP16.89■□□□□ 0.29
CCDC66-220ENST00000484623 MIER1Q8N108 512 aa16.85■□□□□ 0.29
CCDC66-220ENST00000484623 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
CCDC66-220ENST00000484623 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
CCDC66-220ENST00000484623 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
CCDC66-220ENST00000484623 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
CCDC66-220ENST00000484623 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
CCDC66-220ENST00000484623 BBXQ8WY36 941 aaPredicted RBP16.61■□□□□ 0.25
CCDC66-220ENST00000484623 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.24
CCDC66-220ENST00000484623 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
CCDC66-220ENST00000484623 RGL2O15211 777 aa16.55■□□□□ 0.24
CCDC66-220ENST00000484623 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
CCDC66-220ENST00000484623 SPDYE1Q8NFV5 336 aaPredicted RBP16.51■□□□□ 0.23
CCDC66-220ENST00000484623 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
CCDC66-220ENST00000484623 VSIG10Q8N0Z9 540 aa16.48■□□□□ 0.23
CCDC66-220ENST00000484623 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC66-220ENST00000484623 GSE1Q14687 1217 aa16.43■□□□□ 0.22
CCDC66-220ENST00000484623 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
CCDC66-220ENST00000484623 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
CCDC66-220ENST00000484623 CHGAP10645 457 aaKnown RBP16.36■□□□□ 0.21
CCDC66-220ENST00000484623 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
CCDC66-220ENST00000484623 SPRYD3Q8NCJ5 442 aa16.34■□□□□ 0.21
CCDC66-220ENST00000484623 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
CCDC66-220ENST00000484623 BCANQ96GW7 911 aa16.32■□□□□ 0.2
CCDC66-220ENST00000484623 NUBP1P53384 320 aa16.31■□□□□ 0.2
CCDC66-220ENST00000484623 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
CCDC66-220ENST00000484623 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms