RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 PELP1Q8IZL8 1130 aaKnown RBP8.8□□□□□ -1
NF1-216ENST00000495910 MYT1Q01538 1121 aa8.49□□□□□ -1.05
NF1-216ENST00000495910 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
NF1-216ENST00000495910 CCER1Q8TC90 406 aaPredicted RBP8.38□□□□□ -1.07
NF1-216ENST00000495910 YTHDC1Q96MU7 727 aaKnown RBP8.14□□□□□ -1.11
NF1-216ENST00000495910 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
NF1-216ENST00000495910 CENPBP07199 599 aaPredicted RBP8.07□□□□□ -1.12
NF1-216ENST00000495910 DCAF8L2P0C7V8 631 aa8□□□□□ -1.13
NF1-216ENST00000495910 NEFLP07196 543 aa7.95□□□□□ -1.14
NF1-216ENST00000495910 DAXXQ9UER7 740 aaPredicted RBP7.93□□□□□ -1.14
NF1-216ENST00000495910 APLP2Q06481 763 aa7.85□□□□□ -1.15
NF1-216ENST00000495910 RTL5Q5HYW3 569 aaPredicted RBP7.77□□□□□ -1.17
NF1-216ENST00000495910 ZEB1P37275 1124 aaPredicted RBP7.74□□□□□ -1.17
NF1-216ENST00000495910 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
NF1-216ENST00000495910 EHMT2Q96KQ7 1210 aa7.7□□□□□ -1.18
NF1-216ENST00000495910 ZNF316A6NFI3 1004 aaPredicted RBP7.69□□□□□ -1.18
NF1-216ENST00000495910 SUPT5HO00267 1087 aaKnown RBP7.69□□□□□ -1.18
NF1-216ENST00000495910 PCGF6Q9BYE7 350 aa7.64□□□□□ -1.19
NF1-216ENST00000495910 GLIPR1L2Q4G1C9 344 aa7.63□□□□□ -1.19
NF1-216ENST00000495910 NISCHQ9Y2I1 1504 aa7.59□□□□□ -1.19
NF1-216ENST00000495910 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
NF1-216ENST00000495910 EIF5BO60841 1220 aaKnown RBP7.51□□□□□ -1.21
NF1-216ENST00000495910 RANGAP1P46060 587 aaPredicted RBP7.46□□□□□ -1.22
NF1-216ENST00000495910 ANP32BQ92688 251 aaKnown RBP7.4□□□□□ -1.22
NF1-216ENST00000495910 ATP1B4Q9UN42 357 aaPredicted RBP7.36□□□□□ -1.23
NF1-216ENST00000495910 ZBTB47Q9UFB7 747 aaPredicted RBP7.36□□□□□ -1.23
NF1-216ENST00000495910 POLR3GLQ9BT43 218 aa7.36□□□□□ -1.23
NF1-216ENST00000495910 CDK11AQ9UQ88 783 aaPredicted RBP7.33□□□□□ -1.24
NF1-216ENST00000495910 TNNT2P45379 298 aaPredicted RBP7.31□□□□□ -1.24
NF1-216ENST00000495910 MYT1LQ9UL68 1186 aa7.29□□□□□ -1.24
NF1-216ENST00000495910 ANP32AP39687 249 aaKnown RBP7.27□□□□□ -1.25
NF1-216ENST00000495910 SLC4A1APQ9BWU0 796 aaKnown RBP7.25□□□□□ -1.25
NF1-216ENST00000495910 CNGB1Q14028 1251 aaPredicted RBP7.24□□□□□ -1.25
NF1-216ENST00000495910 CDK11BP21127 795 aaKnown RBP7.23□□□□□ -1.25
NF1-216ENST00000495910 HRCP23327 699 aa7.23□□□□□ -1.25
NF1-216ENST00000495910 SHROOM4Q9ULL8 1493 aa7.22□□□□□ -1.25
NF1-216ENST00000495910 BCANQ96GW7 911 aa7.2□□□□□ -1.26
NF1-216ENST00000495910 TRIM44Q96DX7 344 aaPredicted RBP7.18□□□□□ -1.26
NF1-216ENST00000495910 HSP90AA1P07900 732 aaKnown RBP7.17□□□□□ -1.26
NF1-216ENST00000495910 CANXP27824 592 aaKnown RBP7.17□□□□□ -1.26
NF1-216ENST00000495910 UBTFP17480 764 aaKnown RBP7.16□□□□□ -1.26
NF1-216ENST00000495910 NEFMP07197 916 aa7.14□□□□□ -1.27
NF1-216ENST00000495910 NPM2Q86SE8 214 aaKnown RBP7.14□□□□□ -1.27
NF1-216ENST00000495910 GTF3C3Q9Y5Q9 886 aa7.13□□□□□ -1.27
NF1-216ENST00000495910 TRIM26Q12899 539 aaPredicted RBP7.12□□□□□ -1.27
NF1-216ENST00000495910 BCL11AQ9H165 835 aa7.12□□□□□ -1.27
NF1-216ENST00000495910 DIEXFQ68CQ4 756 aaKnown RBP7.11□□□□□ -1.27
NF1-216ENST00000495910 TRIM41Q8WV44 630 aa7.11□□□□□ -1.27
NF1-216ENST00000495910 UPF2Q9HAU5 1272 aaKnown RBP7.11□□□□□ -1.27
NF1-216ENST00000495910 NCLP19338 710 aaKnown RBP7.1□□□□□ -1.27
NF1-216ENST00000495910 SLC24A1O60721 1099 aa7.07□□□□□ -1.28
NF1-216ENST00000495910 ITGAEP38570 1179 aa7.06□□□□□ -1.28
NF1-216ENST00000495910 ZNF326Q5BKZ1 582 aaKnown RBP7.06□□□□□ -1.28
NF1-216ENST00000495910 ARXQ96QS3 562 aa7.05□□□□□ -1.28
NF1-216ENST00000495910 CALRP27797 417 aaKnown RBP7.05□□□□□ -1.28
NF1-216ENST00000495910 AMER1Q5JTC6 1135 aaPredicted RBP7.05□□□□□ -1.28
NF1-216ENST00000495910 ANP32CO43423 234 aa7.05□□□□□ -1.28
NF1-216ENST00000495910 CHIC1Q5VXU3 224 aa7.04□□□□□ -1.28
NF1-216ENST00000495910 NBR1Q14596 966 aa7.04□□□□□ -1.28
NF1-216ENST00000495910 ANP32EQ9BTT0 268 aa7.03□□□□□ -1.28
NF1-216ENST00000495910 PPARGC1BQ86YN6 1023 aaKnown RBP7.02□□□□□ -1.29
NF1-216ENST00000495910 NAP1L5Q96NT1 182 aaPredicted RBP7.01□□□□□ -1.29
NF1-216ENST00000495910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.01□□□□□ -1.29
NF1-216ENST00000495910 HNRNPUL2Q1KMD3 747 aaKnown RBP7.01□□□□□ -1.29
NF1-216ENST00000495910 DNTTIP2Q5QJE6 756 aaKnown RBP7.01□□□□□ -1.29
NF1-216ENST00000495910 ERICH6BQ5W0A0 696 aa7□□□□□ -1.29
NF1-216ENST00000495910 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
NF1-216ENST00000495910 TNNT3P45378 269 aaPredicted RBP6.96□□□□□ -1.29
NF1-216ENST00000495910 GOLGA6L22H0YM25 854 aa6.95□□□□□ -1.3
NF1-216ENST00000495910 ZRSR1Q15695 479 aaKnown RBP6.95□□□□□ -1.3
NF1-216ENST00000495910 ACIN1Q9UKV3 1341 aaKnown RBP6.94□□□□□ -1.3
NF1-216ENST00000495910 GOLGA6L6A8MZA4 724 aa6.93□□□□□ -1.3
NF1-216ENST00000495910 DDRGK1Q96HY6 314 aa6.92□□□□□ -1.3
NF1-216ENST00000495910 BECN1Q14457 450 aa6.91□□□□□ -1.3
NF1-216ENST00000495910 CHAF1AQ13111 956 aaPredicted RBP6.9□□□□□ -1.3
NF1-216ENST00000495910 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.9□□□□□ -1.31
NF1-216ENST00000495910 FKBP8Q14318 412 aa6.9□□□□□ -1.31
NF1-216ENST00000495910 L1TD1Q5T7N2 865 aaKnown RBP6.9□□□□□ -1.31
NF1-216ENST00000495910 NRDCO43847 1150 aa6.89□□□□□ -1.31
NF1-216ENST00000495910 TRIM52Q96A61 297 aa6.88□□□□□ -1.31
NF1-216ENST00000495910 PTMSP20962 102 aa6.87□□□□□ -1.31
NF1-216ENST00000495910 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
NF1-216ENST00000495910 CCDC136Q96JN2 1154 aa6.85□□□□□ -1.31
NF1-216ENST00000495910 RTN4Q9NQC3 1192 aaKnown RBP6.85□□□□□ -1.31
NF1-216ENST00000495910 SETQ01105 290 aaPredicted RBP6.85□□□□□ -1.31
NF1-216ENST00000495910 TULP1O00294 542 aaPredicted RBP6.84□□□□□ -1.31
NF1-216ENST00000495910 PPM1GO15355 546 aaPredicted RBP6.84□□□□□ -1.31
NF1-216ENST00000495910 MYH16Q9H6N6 1097 aa6.83□□□□□ -1.32
NF1-216ENST00000495910 MSNP26038 577 aaKnown RBP6.82□□□□□ -1.32
NF1-216ENST00000495910 NOC3LQ8WTT2 800 aaKnown RBP6.82□□□□□ -1.32
NF1-216ENST00000495910 PLCB2Q00722 1185 aa6.81□□□□□ -1.32
NF1-216ENST00000495910 PNNQ9H307 717 aaKnown RBP6.81□□□□□ -1.32
NF1-216ENST00000495910 GOLGA6L1Q8N7Z2 621 aa6.81□□□□□ -1.32
NF1-216ENST00000495910 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
NF1-216ENST00000495910 NCBP3Q53F19 620 aaKnown RBP6.8□□□□□ -1.32
NF1-216ENST00000495910 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
NF1-216ENST00000495910 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
NF1-216ENST00000495910 PRM3Q9NNZ6 103 aa6.77□□□□□ -1.33
NF1-216ENST00000495910 CASC1Q6TDU7 716 aa6.77□□□□□ -1.33
NF1-216ENST00000495910 A0A0U1RQG5 324 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms