RNA–Protein interactions for RNA: ENST00000440343.5

PPARA-206, Transcript of peroxisome proliferator activated receptor alpha, humanhuman

TSL 1 (best)

Gene PPARA, Length 368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARA-206ENST00000440343 NISCHQ9Y2I1 1504 aa68.33■■■■■ 8.53
PPARA-206ENST00000440343 CCDC180Q9P1Z9 1646 aa61.3■■■■■ 7.4
PPARA-206ENST00000440343 ABCC9O60706 1549 aa61.16■■■■■ 7.38
PPARA-206ENST00000440343 RB1CC1Q8TDY2 1594 aa58.29■■■■■ 6.92
PPARA-206ENST00000440343 NACADO15069 1562 aa57.92■■■■■ 6.86
PPARA-206ENST00000440343 DCAF8L2P0C7V8 631 aa57.61■■■■■ 6.81
PPARA-206ENST00000440343 DNAJC5BQ9UF47 199 aa57.27■■■■■ 6.76
PPARA-206ENST00000440343 MYO15BQ96JP2 1530 aa57.15■■■■■ 6.74
PPARA-206ENST00000440343 UNC13AQ9UPW8 1703 aa57.02■■■■■ 6.72
PPARA-206ENST00000440343 PABPN1Q86U42 306 aaKnown RBP eCLIP56.95■■■■■ 6.71
PPARA-206ENST00000440343 ZCCHC6Q5VYS8 1495 aaKnown RBP56.64■■■■■ 6.66
PPARA-206ENST00000440343 BICRAQ9NZM4 1560 aa56.59■■■■■ 6.65
PPARA-206ENST00000440343 DCAF1Q9Y4B6 1507 aa56.47■■■■■ 6.63
PPARA-206ENST00000440343 SCRIBQ14160 1630 aa55.84■■■■■ 6.53
PPARA-206ENST00000440343 SHROOM4Q9ULL8 1493 aa55.84■■■■■ 6.53
PPARA-206ENST00000440343 CC2D2AQ9P2K1 1620 aa55.28■■■■■ 6.44
PPARA-206ENST00000440343 EIF4G1Q04637 1599 aaKnown RBP55.19■■■■■ 6.42
PPARA-206ENST00000440343 CECR2Q9BXF3 1484 aa55.09■■■■■ 6.41
PPARA-206ENST00000440343 NCAPD3P42695 1498 aa53.45■■■■■ 6.15
PPARA-206ENST00000440343 ATAD2BQ9ULI0 1458 aa53.3■■■■■ 6.12
PPARA-206ENST00000440343 SMARCA4P51532 1647 aa53.29■■■■■ 6.12
PPARA-206ENST00000440343 SMARCA2P51531 1590 aa53.18■■■■■ 6.1
PPARA-206ENST00000440343 HMGXB3Q12766 1538 aa53.07■■■■■ 6.09
PPARA-206ENST00000440343 BAZ1AQ9NRL2 1556 aaPredicted RBP53.04■■■■■ 6.08
PPARA-206ENST00000440343 ERCC6Q03468 1493 aa52.81■■■■■ 6.04
PPARA-206ENST00000440343 BAZ1BQ9UIG0 1483 aaKnown RBP52.79■■■■■ 6.04
PPARA-206ENST00000440343 PEG3Q9GZU2 1588 aa52.78■■■■■ 6.04
PPARA-206ENST00000440343 CUX2O14529 1486 aa52.69■■■■■ 6.02
PPARA-206ENST00000440343 MROH2BQ7Z745 1585 aa52.64■■■■■ 6.02
PPARA-206ENST00000440343 NESP48681 1621 aa52.57■■■■■ 6.01
PPARA-206ENST00000440343 DNAJC5Q9H3Z4 198 aa52.53■■■■■ 6
PPARA-206ENST00000440343 LAMC3Q9Y6N6 1575 aa52.25■■■■■ 5.96
PPARA-206ENST00000440343 WIZO95785 1651 aa52.04■■■■■ 5.92
PPARA-206ENST00000440343 THOC2Q8NI27 1593 aaKnown RBP52.04■■■■■ 5.92
PPARA-206ENST00000440343 KIF21AQ7Z4S6 1674 aa51.94■■■■■ 5.91
PPARA-206ENST00000440343 PDS5BQ9NTI5 1447 aa51.93■■■■■ 5.9
PPARA-206ENST00000440343 CADPSQ9ULU8 1353 aa51.83■■■■■ 5.89
PPARA-206ENST00000440343 RSF1Q96T23 1441 aaPredicted RBP51.59■■■■■ 5.85
PPARA-206ENST00000440343 MRC2Q9UBG0 1479 aa51.47■■■■■ 5.83
PPARA-206ENST00000440343 TOP2AP11388 1531 aaKnown RBP51.38■■■■■ 5.82
PPARA-206ENST00000440343 WDR62O43379 1518 aa51.35■■■■■ 5.81
PPARA-206ENST00000440343 CEP164Q9UPV0 1460 aa51.29■■■■■ 5.8
PPARA-206ENST00000440343 CFTRP13569 1480 aa51.27■■■■■ 5.8
PPARA-206ENST00000440343 FANCD2Q9BXW9 1451 aa51.24■■■■■ 5.79
PPARA-206ENST00000440343 PRDM2Q13029 1718 aa50.84■■■■■ 5.73
PPARA-206ENST00000440343 URB2Q14146 1524 aaKnown RBP50.82■■■■■ 5.73
PPARA-206ENST00000440343 CCDC88BA6NC98 1476 aa50.79■■■■■ 5.72
PPARA-206ENST00000440343 OSCARQ8IYS5 282 aa50.29■■■■■ 5.64
PPARA-206ENST00000440343 TOPBP1Q92547 1522 aa50.29■■■■■ 5.64
PPARA-206ENST00000440343 IFT140Q96RY7 1462 aa50.27■■■■■ 5.64
PPARA-206ENST00000440343 TRIM41Q8WV44 630 aa50.25■■■■■ 5.63
PPARA-206ENST00000440343 ABCC8Q09428 1581 aa50.21■■■■■ 5.63
PPARA-206ENST00000440343 ZNF608Q9ULD9 1512 aaPredicted RBP50.16■■■■■ 5.62
PPARA-206ENST00000440343 DNMBPQ6XZF7 1577 aa50.13■■■■■ 5.61
PPARA-206ENST00000440343 EIF4G3O43432 1585 aaKnown RBP49.91■■■■■ 5.58
PPARA-206ENST00000440343 TARBP1Q13395 1621 aaKnown RBP49.85■■■■■ 5.57
PPARA-206ENST00000440343 POLA1P09884 1462 aaPredicted RBP49.78■■■■■ 5.56
PPARA-206ENST00000440343 AQRO60306 1485 aaKnown RBP eCLIP49.72■■■■■ 5.55
PPARA-206ENST00000440343 RIMBP3CA6NJZ7 1639 aa49.64■■■■■ 5.54
PPARA-206ENST00000440343 RIMBP3BA6NNM3 1639 aa49.64■■■■■ 5.54
PPARA-206ENST00000440343 RIMBP3Q9UFD9 1639 aa49.64■■■■■ 5.54
PPARA-206ENST00000440343 RAD54L2Q9Y4B4 1467 aa49.59■■■■■ 5.53
PPARA-206ENST00000440343 SOGA1O94964 1423 aa49.56■■■■■ 5.52
PPARA-206ENST00000440343 CHD1O14646 1710 aa49.55■■■■■ 5.52
PPARA-206ENST00000440343 ARHGEF11O15085 1522 aa49.49■■■■■ 5.51
PPARA-206ENST00000440343 FGD5Q6ZNL6 1462 aa49.48■■■■■ 5.51
PPARA-206ENST00000440343 CUX1P39880 1505 aa49.46■■■■■ 5.51
PPARA-206ENST00000440343 TDRD9Q8NDG6 1382 aaKnown RBP49.43■■■■■ 5.5
PPARA-206ENST00000440343 SUPT5HO00267 1087 aaKnown RBP49.37■■■■■ 5.49
PPARA-206ENST00000440343 FBLN2P98095 1184 aa49.37■■■■■ 5.49
PPARA-206ENST00000440343 WDR97A6NE52 1622 aa49.37■■■■■ 5.49
PPARA-206ENST00000440343 SNAPC4Q5SXM2 1469 aa49.22■■■■■ 5.47
PPARA-206ENST00000440343 GRIN2BQ13224 1484 aa49.12■■■■■ 5.45
PPARA-206ENST00000440343 MAGI1Q96QZ7 1491 aaPredicted RBP49.12■■■■■ 5.45
PPARA-206ENST00000440343 CYB5RLQ6IPT4 315 aa49.11■■■■■ 5.45
PPARA-206ENST00000440343 CHMP7Q8WUX9 453 aaPredicted RBP49.04■■■■■ 5.44
PPARA-206ENST00000440343 ARAP1Q96P48 1450 aa49■■■■■ 5.44
PPARA-206ENST00000440343 PBRM1Q86U86 1689 aa48.98■■■■■ 5.43
PPARA-206ENST00000440343 GAPVD1Q14C86 1478 aa48.96■■■■■ 5.43
PPARA-206ENST00000440343 CLASP1Q7Z460 1538 aa48.96■■■■■ 5.43
PPARA-206ENST00000440343 SYNJ1O43426 1573 aa48.94■■■■■ 5.43
PPARA-206ENST00000440343 SYNJ2O15056 1496 aa48.94■■■■■ 5.43
PPARA-206ENST00000440343 ABCA10Q8WWZ4 1543 aa48.93■■■■■ 5.42
PPARA-206ENST00000440343 ABCA5Q8WWZ7 1642 aa48.87■■■■■ 5.41
PPARA-206ENST00000440343 WRNQ14191 1432 aaPredicted RBP eCLIP48.75■■■■■ 5.4
PPARA-206ENST00000440343 BIVM-ERCC5R4GMW8 1640 aa48.72■■■■■ 5.39
PPARA-206ENST00000440343 TOP2BQ02880 1626 aa48.71■■■■■ 5.39
PPARA-206ENST00000440343 TRHP20396 242 aaPredicted RBP48.52■■■■■ 5.36
PPARA-206ENST00000440343 GRIN2AQ12879 1464 aa48.48■■■■■ 5.35
PPARA-206ENST00000440343 ADAMTS12P58397 1594 aa48.48■■■■■ 5.35
PPARA-206ENST00000440343 FHAD1B1AJZ9 1412 aa48.34■■■■■ 5.33
PPARA-206ENST00000440343 ERICH3Q5RHP9 1530 aa48.33■■■■■ 5.33
PPARA-206ENST00000440343 NUP160Q12769 1436 aa48.32■■■■■ 5.33
PPARA-206ENST00000440343 CEP170Q5SW79 1584 aa48.31■■■■■ 5.32
PPARA-206ENST00000440343 ERCC6L2Q5T890 1561 aa48.19■■■■■ 5.31
PPARA-206ENST00000440343 SHROOM2Q13796 1616 aa48.11■■■■■ 5.29
PPARA-206ENST00000440343 PRG4Q92954 1404 aaPredicted RBP47.84■■■■■ 5.25
PPARA-206ENST00000440343 JPH4Q96JJ6 628 aa47.83■■■■■ 5.25
PPARA-206ENST00000440343 RUSC2Q8N2Y8 1516 aa47.8■■■■■ 5.24
PPARA-206ENST00000440343 KIF27Q86VH2 1401 aa47.75■■■■■ 5.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms