Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
DDX11Q96FC9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
DDX11Q96FC9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX11Q96FC9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
DDX11Q96FC9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX11Q96FC9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 IER3-202ENST00000376377 1350 ntBASIC21.81■■□□□ 1.08
DDX11Q96FC9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DDX11Q96FC9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX11Q96FC9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 AC008556.1-201ENST00000610908 2040 ntBASIC21.8■■□□□ 1.08
DDX11Q96FC9 AC135050.7-201ENST00000624508 2218 ntBASIC21.8■■□□□ 1.08
DDX11Q96FC9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 KRT18P38-201ENST00000449496 1282 ntBASIC21.8■■□□□ 1.08
DDX11Q96FC9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 NEK4P2-201ENST00000580004 1012 ntBASIC21.8■■□□□ 1.08
DDX11Q96FC9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX11Q96FC9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX11Q96FC9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX11Q96FC9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX11Q96FC9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms