RNA–Protein interactions for RNA: ENST00000376377.2

IER3-202, Transcript of immediate early response 3, humanhuman

BASIC

Gene IER3, Length 1,350 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IER3-202ENST00000376377 NISCHQ9Y2I1 1504 aa45.77■■■■■ 4.92
IER3-202ENST00000376377 CCDC180Q9P1Z9 1646 aa41.03■■■■■ 4.16
IER3-202ENST00000376377 ABCC9O60706 1549 aa40.94■■■■■ 4.14
IER3-202ENST00000376377 RB1CC1Q8TDY2 1594 aa39.02■■■■□ 3.84
IER3-202ENST00000376377 NACADO15069 1562 aa38.78■■■■□ 3.8
IER3-202ENST00000376377 DCAF8L2P0C7V8 631 aa38.6■■■■□ 3.77
IER3-202ENST00000376377 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
IER3-202ENST00000376377 DNAJC5BQ9UF47 199 aa38.26■■■■□ 3.72
IER3-202ENST00000376377 PABPN1Q86U42 306 aaKnown RBP eCLIP38.12■■■■□ 3.692e-8■□□□□ 10.1
IER3-202ENST00000376377 UNC13AQ9UPW8 1703 aa38.07■■■■□ 3.68
IER3-202ENST00000376377 ZCCHC6Q5VYS8 1495 aaKnown RBP37.97■■■■□ 3.67
IER3-202ENST00000376377 BICRAQ9NZM4 1560 aa37.84■■■■□ 3.65
IER3-202ENST00000376377 DCAF1Q9Y4B6 1507 aa37.83■■■■□ 3.65
IER3-202ENST00000376377 SCRIBQ14160 1630 aa37.41■■■■□ 3.58
IER3-202ENST00000376377 SHROOM4Q9ULL8 1493 aa37.41■■■■□ 3.58
IER3-202ENST00000376377 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
IER3-202ENST00000376377 EIF4G1Q04637 1599 aaKnown RBP36.93■■■■□ 3.5
IER3-202ENST00000376377 CECR2Q9BXF3 1484 aa36.88■■■■□ 3.49
IER3-202ENST00000376377 NCAPD3P42695 1498 aa35.79■■■■□ 3.32
IER3-202ENST00000376377 ATAD2BQ9ULI0 1458 aa35.7■■■■□ 3.31
IER3-202ENST00000376377 SMARCA4P51532 1647 aa35.69■■■■□ 3.3
IER3-202ENST00000376377 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
IER3-202ENST00000376377 HMGXB3Q12766 1538 aa35.55■■■■□ 3.28
IER3-202ENST00000376377 BAZ1AQ9NRL2 1556 aaPredicted RBP35.54■■■■□ 3.28
IER3-202ENST00000376377 BAZ1BQ9UIG0 1483 aaKnown RBP35.38■■■■□ 3.25
IER3-202ENST00000376377 ERCC6Q03468 1493 aa35.37■■■■□ 3.25
IER3-202ENST00000376377 PEG3Q9GZU2 1588 aa35.34■■■■□ 3.25
IER3-202ENST00000376377 MROH2BQ7Z745 1585 aa35.27■■■■□ 3.24
IER3-202ENST00000376377 CUX2O14529 1486 aa35.26■■■■□ 3.24
IER3-202ENST00000376377 NESP48681 1621 aa35.18■■■■□ 3.22
IER3-202ENST00000376377 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
IER3-202ENST00000376377 LAMC3Q9Y6N6 1575 aa34.97■■■■□ 3.19
IER3-202ENST00000376377 WIZO95785 1651 aa34.84■■■■□ 3.17
IER3-202ENST00000376377 THOC2Q8NI27 1593 aaKnown RBP34.82■■■■□ 3.16
IER3-202ENST00000376377 PDS5BQ9NTI5 1447 aa34.79■■■■□ 3.16
IER3-202ENST00000376377 KIF21AQ7Z4S6 1674 aa34.72■■■■□ 3.15
IER3-202ENST00000376377 CADPSQ9ULU8 1353 aa34.71■■■■□ 3.15
IER3-202ENST00000376377 RSF1Q96T23 1441 aaPredicted RBP34.58■■■■□ 3.13
IER3-202ENST00000376377 MRC2Q9UBG0 1479 aa34.48■■■■□ 3.11
IER3-202ENST00000376377 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
IER3-202ENST00000376377 WDR62O43379 1518 aa34.38■■■■□ 3.09
IER3-202ENST00000376377 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
IER3-202ENST00000376377 CFTRP13569 1480 aa34.34■■■■□ 3.09
IER3-202ENST00000376377 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
IER3-202ENST00000376377 CCDC88BA6NC98 1476 aa34.03■■■■□ 3.04
IER3-202ENST00000376377 URB2Q14146 1524 aaKnown RBP34.03■■■■□ 3.04
IER3-202ENST00000376377 PRDM2Q13029 1718 aa33.97■■■■□ 3.03
IER3-202ENST00000376377 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
IER3-202ENST00000376377 IFT140Q96RY7 1462 aa33.67■■■□□ 2.98
IER3-202ENST00000376377 OSCARQ8IYS5 282 aa33.65■■■□□ 2.98
IER3-202ENST00000376377 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
IER3-202ENST00000376377 TRIM41Q8WV44 630 aa33.62■■■□□ 2.97
IER3-202ENST00000376377 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
IER3-202ENST00000376377 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
IER3-202ENST00000376377 EIF4G3O43432 1585 aaKnown RBP33.42■■■□□ 2.94
IER3-202ENST00000376377 TARBP1Q13395 1621 aaKnown RBP33.36■■■□□ 2.93
IER3-202ENST00000376377 POLA1P09884 1462 aaPredicted RBP33.34■■■□□ 2.93
IER3-202ENST00000376377 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.922e-11■■■■■ 28.9
IER3-202ENST00000376377 RAD54L2Q9Y4B4 1467 aa33.22■■■□□ 2.91
IER3-202ENST00000376377 SOGA1O94964 1423 aa33.2■■■□□ 2.91
IER3-202ENST00000376377 RIMBP3CA6NJZ7 1639 aa33.19■■■□□ 2.9
IER3-202ENST00000376377 RIMBP3BA6NNM3 1639 aa33.19■■■□□ 2.9
IER3-202ENST00000376377 RIMBP3Q9UFD9 1639 aa33.19■■■□□ 2.9
IER3-202ENST00000376377 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
IER3-202ENST00000376377 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
IER3-202ENST00000376377 CUX1P39880 1505 aa33.13■■■□□ 2.89
IER3-202ENST00000376377 TDRD9Q8NDG6 1382 aaKnown RBP33.12■■■□□ 2.89
IER3-202ENST00000376377 CHD1O14646 1710 aa33.12■■■□□ 2.89
IER3-202ENST00000376377 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
IER3-202ENST00000376377 FBLN2P98095 1184 aa33.09■■■□□ 2.89
IER3-202ENST00000376377 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
IER3-202ENST00000376377 SNAPC4Q5SXM2 1469 aa32.98■■■□□ 2.87
IER3-202ENST00000376377 GRIN2BQ13224 1484 aa32.91■■■□□ 2.86
IER3-202ENST00000376377 MAGI1Q96QZ7 1491 aaPredicted RBP32.9■■■□□ 2.86
IER3-202ENST00000376377 CYB5RLQ6IPT4 315 aa32.85■■■□□ 2.85
IER3-202ENST00000376377 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
IER3-202ENST00000376377 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
IER3-202ENST00000376377 SYNJ2O15056 1496 aa32.79■■■□□ 2.84
IER3-202ENST00000376377 ARAP1Q96P48 1450 aa32.79■■■□□ 2.84
IER3-202ENST00000376377 ABCA10Q8WWZ4 1543 aa32.79■■■□□ 2.84
IER3-202ENST00000376377 SYNJ1O43426 1573 aa32.78■■■□□ 2.84
IER3-202ENST00000376377 CLASP1Q7Z460 1538 aa32.77■■■□□ 2.84
IER3-202ENST00000376377 PBRM1Q86U86 1689 aa32.76■■■□□ 2.84
IER3-202ENST00000376377 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
IER3-202ENST00000376377 WRNQ14191 1432 aaPredicted RBP eCLIP32.69■■■□□ 2.82
IER3-202ENST00000376377 TOP2BQ02880 1626 aa32.64■■■□□ 2.82
IER3-202ENST00000376377 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
IER3-202ENST00000376377 TRHP20396 242 aaPredicted RBP32.48■■■□□ 2.79
IER3-202ENST00000376377 ADAMTS12P58397 1594 aa32.48■■■□□ 2.79
IER3-202ENST00000376377 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
IER3-202ENST00000376377 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
IER3-202ENST00000376377 ERICH3Q5RHP9 1530 aa32.38■■■□□ 2.77
IER3-202ENST00000376377 NUP160Q12769 1436 aa32.37■■■□□ 2.77
IER3-202ENST00000376377 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
IER3-202ENST00000376377 ERCC6L2Q5T890 1561 aa32.25■■■□□ 2.75
IER3-202ENST00000376377 SHROOM2Q13796 1616 aa32.19■■■□□ 2.74
IER3-202ENST00000376377 PRG4Q92954 1404 aaPredicted RBP32.05■■■□□ 2.72
IER3-202ENST00000376377 RUSC2Q8N2Y8 1516 aa32.03■■■□□ 2.72
IER3-202ENST00000376377 KIF27Q86VH2 1401 aa32.03■■■□□ 2.72
IER3-202ENST00000376377 JPH4Q96JJ6 628 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms