RNA–Protein interactions for RNA: ENST00000639807.1

SLC35A3-217, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5 BASIC

Gene SLC35A3, Length 2,767 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-217ENST00000639807 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.55
SLC35A3-217ENST00000639807 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
SLC35A3-217ENST00000639807 SUPT5HO00267 1087 aaKnown RBP31.93■■■□□ 2.7
SLC35A3-217ENST00000639807 DCAF8L2P0C7V8 631 aa31.61■■■□□ 2.65
SLC35A3-217ENST00000639807 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
SLC35A3-217ENST00000639807 CCDC180Q9P1Z9 1646 aa31.33■■■□□ 2.61
SLC35A3-217ENST00000639807 CHIC1Q5VXU3 224 aa30.83■■■□□ 2.53
SLC35A3-217ENST00000639807 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
SLC35A3-217ENST00000639807 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
SLC35A3-217ENST00000639807 PCGF6Q9BYE7 350 aa30.29■■■□□ 2.44
SLC35A3-217ENST00000639807 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
SLC35A3-217ENST00000639807 HRCP23327 699 aa30.09■■■□□ 2.41
SLC35A3-217ENST00000639807 PPARGC1BQ86YN6 1023 aaKnown RBP29.91■■■□□ 2.38
SLC35A3-217ENST00000639807 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
SLC35A3-217ENST00000639807 EHMT2Q96KQ7 1210 aa29.75■■■□□ 2.35
SLC35A3-217ENST00000639807 ABCC9O60706 1549 aa29.7■■■□□ 2.35
SLC35A3-217ENST00000639807 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
SLC35A3-217ENST00000639807 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
SLC35A3-217ENST00000639807 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
SLC35A3-217ENST00000639807 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
SLC35A3-217ENST00000639807 TRIM26Q12899 539 aaPredicted RBP29.35■■■□□ 2.29
SLC35A3-217ENST00000639807 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
SLC35A3-217ENST00000639807 MROH2BQ7Z745 1585 aa29.1■■■□□ 2.25
SLC35A3-217ENST00000639807 NACADO15069 1562 aa29.05■■■□□ 2.24
SLC35A3-217ENST00000639807 WIZO95785 1651 aa28.97■■■□□ 2.23
SLC35A3-217ENST00000639807 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
SLC35A3-217ENST00000639807 ZEB1P37275 1124 aaPredicted RBP28.61■■■□□ 2.17
SLC35A3-217ENST00000639807 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
SLC35A3-217ENST00000639807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.49■■■□□ 2.15
SLC35A3-217ENST00000639807 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
SLC35A3-217ENST00000639807 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.14
SLC35A3-217ENST00000639807 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.14
SLC35A3-217ENST00000639807 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.14
SLC35A3-217ENST00000639807 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
SLC35A3-217ENST00000639807 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
SLC35A3-217ENST00000639807 CCER1Q8TC90 406 aaPredicted RBP28.28■■■□□ 2.12
SLC35A3-217ENST00000639807 SOGA1O94964 1423 aa28.26■■■□□ 2.11
SLC35A3-217ENST00000639807 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.11
SLC35A3-217ENST00000639807 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
SLC35A3-217ENST00000639807 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
SLC35A3-217ENST00000639807 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
SLC35A3-217ENST00000639807 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
SLC35A3-217ENST00000639807 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
SLC35A3-217ENST00000639807 RANGAP1P46060 587 aaPredicted RBP28.02■■■□□ 2.08
SLC35A3-217ENST00000639807 SCAF1Q9H7N4 1312 aaKnown RBP27.99■■■□□ 2.07
SLC35A3-217ENST00000639807 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
SLC35A3-217ENST00000639807 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
SLC35A3-217ENST00000639807 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
SLC35A3-217ENST00000639807 EEA1Q15075 1411 aa27.77■■■□□ 2.04
SLC35A3-217ENST00000639807 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
SLC35A3-217ENST00000639807 GOLGA3Q08378 1498 aa27.75■■■□□ 2.03
SLC35A3-217ENST00000639807 DIEXFQ68CQ4 756 aaKnown RBP27.73■■■□□ 2.03
SLC35A3-217ENST00000639807 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
SLC35A3-217ENST00000639807 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
SLC35A3-217ENST00000639807 ATAD2BQ9ULI0 1458 aa27.63■■■□□ 2.01
SLC35A3-217ENST00000639807 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
SLC35A3-217ENST00000639807 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
SLC35A3-217ENST00000639807 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
SLC35A3-217ENST00000639807 CLIP1P30622 1438 aa27.55■■■□□ 2
SLC35A3-217ENST00000639807 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
SLC35A3-217ENST00000639807 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
SLC35A3-217ENST00000639807 YTHDC1Q96MU7 727 aaKnown RBP27.48■■□□□ 1.99
SLC35A3-217ENST00000639807 APLP2Q06481 763 aa27.45■■□□□ 1.99
SLC35A3-217ENST00000639807 ZNF316A6NFI3 1004 aaPredicted RBP27.41■■□□□ 1.98
SLC35A3-217ENST00000639807 KIF21BO75037 1637 aa27.41■■□□□ 1.98
SLC35A3-217ENST00000639807 GTF3C3Q9Y5Q9 886 aa27.4■■□□□ 1.98
SLC35A3-217ENST00000639807 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
SLC35A3-217ENST00000639807 CENPBP07199 599 aaPredicted RBP27.29■■□□□ 1.96
SLC35A3-217ENST00000639807 TOP2BQ02880 1626 aa27.21■■□□□ 1.95
SLC35A3-217ENST00000639807 MIER1Q8N108 512 aa27.2■■□□□ 1.94
SLC35A3-217ENST00000639807 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
SLC35A3-217ENST00000639807 ITGAEP38570 1179 aa27.11■■□□□ 1.93
SLC35A3-217ENST00000639807 PELP1Q8IZL8 1130 aaKnown RBP27.11■■□□□ 1.93
SLC35A3-217ENST00000639807 PRXQ9BXM0 1461 aa27.05■■□□□ 1.92
SLC35A3-217ENST00000639807 CUX1P39880 1505 aa27.04■■□□□ 1.92
SLC35A3-217ENST00000639807 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
SLC35A3-217ENST00000639807 ARAP1Q96P48 1450 aa27.02■■□□□ 1.92
SLC35A3-217ENST00000639807 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
SLC35A3-217ENST00000639807 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
SLC35A3-217ENST00000639807 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
SLC35A3-217ENST00000639807 DHX57Q6P158 1386 aaKnown RBP26.9■■□□□ 1.9
SLC35A3-217ENST00000639807 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
SLC35A3-217ENST00000639807 CFTRP13569 1480 aa26.85■■□□□ 1.89
SLC35A3-217ENST00000639807 P3H3Q8IVL6 736 aa26.8■■□□□ 1.88
SLC35A3-217ENST00000639807 ARHGAP35Q9NRY4 1499 aa26.79■■□□□ 1.88
SLC35A3-217ENST00000639807 ATP1B4Q9UN42 357 aaPredicted RBP26.79■■□□□ 1.88
SLC35A3-217ENST00000639807 CUX2O14529 1486 aa26.75■■□□□ 1.87
SLC35A3-217ENST00000639807 IGF1RP08069 1367 aa26.72■■□□□ 1.87
SLC35A3-217ENST00000639807 CCNB3Q8WWL7 1395 aa26.71■■□□□ 1.87
SLC35A3-217ENST00000639807 RRBP1Q9P2E9 1410 aaKnown RBP26.7■■□□□ 1.86
SLC35A3-217ENST00000639807 CLSPNQ9HAW4 1339 aa26.67■■□□□ 1.86
SLC35A3-217ENST00000639807 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
SLC35A3-217ENST00000639807 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
SLC35A3-217ENST00000639807 FAM50AQ14320 339 aaKnown RBP26.58■■□□□ 1.85
SLC35A3-217ENST00000639807 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
SLC35A3-217ENST00000639807 RAB3GAP2Q9H2M9 1393 aa26.55■■□□□ 1.84
SLC35A3-217ENST00000639807 KCNH8Q96L42 1107 aa26.51■■□□□ 1.83
SLC35A3-217ENST00000639807 SIN3AQ96ST3 1273 aa26.48■■□□□ 1.83
SLC35A3-217ENST00000639807 PHLDB1Q86UU1 1377 aa26.47■■□□□ 1.83
SLC35A3-217ENST00000639807 HIRIP3Q9BW71 556 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms