RNA–Protein interactions for RNA: ENST00000622871.1

MARK4-211, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MARK4, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-211ENST00000622871 NISCHQ9Y2I1 1504 aa44.25■■■■■ 4.67
MARK4-211ENST00000622871 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
MARK4-211ENST00000622871 ABCC9O60706 1549 aa37.34■■■■□ 3.57
MARK4-211ENST00000622871 ZCCHC6Q5VYS8 1495 aaKnown RBP37.11■■■■□ 3.53
MARK4-211ENST00000622871 DCAF1Q9Y4B6 1507 aa36.8■■■■□ 3.48
MARK4-211ENST00000622871 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
MARK4-211ENST00000622871 NACADO15069 1562 aa36.52■■■■□ 3.44
MARK4-211ENST00000622871 RB1CC1Q8TDY2 1594 aa36.34■■■■□ 3.41
MARK4-211ENST00000622871 DCAF8L2P0C7V8 631 aa36.26■■■■□ 3.4
MARK4-211ENST00000622871 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
MARK4-211ENST00000622871 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
MARK4-211ENST00000622871 SHROOM4Q9ULL8 1493 aa35.23■■■■□ 3.23
MARK4-211ENST00000622871 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
MARK4-211ENST00000622871 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
MARK4-211ENST00000622871 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.09
MARK4-211ENST00000622871 SMARCA4P51532 1647 aa34.23■■■■□ 3.07
MARK4-211ENST00000622871 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
MARK4-211ENST00000622871 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
MARK4-211ENST00000622871 MROH2BQ7Z745 1585 aa34.06■■■■□ 3.04
MARK4-211ENST00000622871 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
MARK4-211ENST00000622871 PEG3Q9GZU2 1588 aa33.94■■■■□ 3.02
MARK4-211ENST00000622871 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
MARK4-211ENST00000622871 SMARCA2P51531 1590 aa33.84■■■■□ 3.01
MARK4-211ENST00000622871 DNAJC5BQ9UF47 199 aa33.82■■■■□ 3
MARK4-211ENST00000622871 WIZO95785 1651 aa33.81■■■■□ 3
MARK4-211ENST00000622871 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
MARK4-211ENST00000622871 HMGXB3Q12766 1538 aa33.63■■■□□ 2.97
MARK4-211ENST00000622871 SUPT5HO00267 1087 aaKnown RBP33.58■■■□□ 2.97
MARK4-211ENST00000622871 TOP2AP11388 1531 aaKnown RBP33.57■■■□□ 2.96
MARK4-211ENST00000622871 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
MARK4-211ENST00000622871 BAZ1BQ9UIG0 1483 aaKnown RBP33.51■■■□□ 2.96
MARK4-211ENST00000622871 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
MARK4-211ENST00000622871 PRDM2Q13029 1718 aa32.82■■■□□ 2.85
MARK4-211ENST00000622871 LAMC3Q9Y6N6 1575 aa32.68■■■□□ 2.82
MARK4-211ENST00000622871 CFTRP13569 1480 aa32.63■■■□□ 2.81
MARK4-211ENST00000622871 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
MARK4-211ENST00000622871 NESP48681 1621 aa32.48■■■□□ 2.79
MARK4-211ENST00000622871 PDS5BQ9NTI5 1447 aa32.3■■■□□ 2.76
MARK4-211ENST00000622871 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.75
MARK4-211ENST00000622871 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
MARK4-211ENST00000622871 CEP164Q9UPV0 1460 aa32.18■■■□□ 2.74
MARK4-211ENST00000622871 ERCC6Q03468 1493 aa32.11■■■□□ 2.73
MARK4-211ENST00000622871 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
MARK4-211ENST00000622871 BIVM-ERCC5R4GMW8 1640 aa32.06■■■□□ 2.72
MARK4-211ENST00000622871 WRNQ14191 1432 aaPredicted RBP eCLIP32.05■■■□□ 2.72
MARK4-211ENST00000622871 TOP2BQ02880 1626 aa32■■■□□ 2.71
MARK4-211ENST00000622871 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
MARK4-211ENST00000622871 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
MARK4-211ENST00000622871 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
MARK4-211ENST00000622871 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
MARK4-211ENST00000622871 CUX1P39880 1505 aa31.93■■■□□ 2.7
MARK4-211ENST00000622871 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
MARK4-211ENST00000622871 WDR62O43379 1518 aa31.85■■■□□ 2.69
MARK4-211ENST00000622871 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
MARK4-211ENST00000622871 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
MARK4-211ENST00000622871 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
MARK4-211ENST00000622871 FGD5Q6ZNL6 1462 aa31.68■■■□□ 2.66
MARK4-211ENST00000622871 CUX2O14529 1486 aa31.67■■■□□ 2.66
MARK4-211ENST00000622871 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
MARK4-211ENST00000622871 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
MARK4-211ENST00000622871 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
MARK4-211ENST00000622871 ABCA10Q8WWZ4 1543 aa31.47■■■□□ 2.63
MARK4-211ENST00000622871 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
MARK4-211ENST00000622871 SOGA1O94964 1423 aa31.44■■■□□ 2.62
MARK4-211ENST00000622871 EEA1Q15075 1411 aa31.42■■■□□ 2.62
MARK4-211ENST00000622871 RAD54L2Q9Y4B4 1467 aa31.37■■■□□ 2.61
MARK4-211ENST00000622871 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
MARK4-211ENST00000622871 KIF27Q86VH2 1401 aa31.32■■■□□ 2.61
MARK4-211ENST00000622871 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
MARK4-211ENST00000622871 EIF4G3O43432 1585 aaKnown RBP31.23■■■□□ 2.59
MARK4-211ENST00000622871 ERICH3Q5RHP9 1530 aa31.17■■■□□ 2.58
MARK4-211ENST00000622871 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
MARK4-211ENST00000622871 CUL7Q14999 1698 aa31.16■■■□□ 2.58
MARK4-211ENST00000622871 RUSC2Q8N2Y8 1516 aa31.15■■■□□ 2.58
MARK4-211ENST00000622871 ZNF608Q9ULD9 1512 aaPredicted RBP31.14■■■□□ 2.57
MARK4-211ENST00000622871 TDRD9Q8NDG6 1382 aaKnown RBP31.07■■■□□ 2.56
MARK4-211ENST00000622871 KIF21BO75037 1637 aa31.07■■■□□ 2.56
MARK4-211ENST00000622871 GRIN2BQ13224 1484 aa31.06■■■□□ 2.56
MARK4-211ENST00000622871 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.565e-10■■■■■ 39.2
MARK4-211ENST00000622871 CSRNP3Q8WYN3 585 aa31.01■■■□□ 2.55
MARK4-211ENST00000622871 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
MARK4-211ENST00000622871 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.55
MARK4-211ENST00000622871 IGF1RP08069 1367 aa30.95■■■□□ 2.55
MARK4-211ENST00000622871 FAM9AQ8IZU1 332 aaPredicted RBP30.95■■■□□ 2.55
MARK4-211ENST00000622871 PRXQ9BXM0 1461 aa30.94■■■□□ 2.54
MARK4-211ENST00000622871 SNAPC4Q5SXM2 1469 aa30.87■■■□□ 2.53
MARK4-211ENST00000622871 GOLGA3Q08378 1498 aa30.86■■■□□ 2.53
MARK4-211ENST00000622871 FHAD1B1AJZ9 1412 aa30.85■■■□□ 2.53
MARK4-211ENST00000622871 RAPGEF2Q9Y4G8 1499 aa30.84■■■□□ 2.53
MARK4-211ENST00000622871 CARMIL1Q5VZK9 1371 aa30.84■■■□□ 2.53
MARK4-211ENST00000622871 SYNJ2O15056 1496 aa30.77■■■□□ 2.52
MARK4-211ENST00000622871 CTTNBP2Q8WZ74 1663 aa30.74■■■□□ 2.51
MARK4-211ENST00000622871 CHD1O14646 1710 aa30.71■■■□□ 2.51
MARK4-211ENST00000622871 GRIN2AQ12879 1464 aa30.67■■■□□ 2.5
MARK4-211ENST00000622871 TNIKQ9UKE5 1360 aa30.56■■■□□ 2.48
MARK4-211ENST00000622871 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
MARK4-211ENST00000622871 CEP170Q5SW79 1584 aa30.49■■■□□ 2.47
MARK4-211ENST00000622871 NUP160Q12769 1436 aa30.48■■■□□ 2.47
MARK4-211ENST00000622871 LOC105371045A0A1W2PR82 267 aa30.48■■■□□ 2.47
MARK4-211ENST00000622871 UBTFP17480 764 aaKnown RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms