RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
LINC00461-203ENST00000504246 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
LINC00461-203ENST00000504246 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
LINC00461-203ENST00000504246 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
LINC00461-203ENST00000504246 SUPT5HO00267 1087 aaKnown RBP31.85■■■□□ 2.69
LINC00461-203ENST00000504246 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
LINC00461-203ENST00000504246 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
LINC00461-203ENST00000504246 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
LINC00461-203ENST00000504246 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
LINC00461-203ENST00000504246 ABCC9O60706 1549 aa30.53■■■□□ 2.48
LINC00461-203ENST00000504246 HRCP23327 699 aa30.44■■■□□ 2.46
LINC00461-203ENST00000504246 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
LINC00461-203ENST00000504246 PCGF6Q9BYE7 350 aa30.23■■■□□ 2.43
LINC00461-203ENST00000504246 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
LINC00461-203ENST00000504246 NACADO15069 1562 aa30.1■■■□□ 2.41
LINC00461-203ENST00000504246 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
LINC00461-203ENST00000504246 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
LINC00461-203ENST00000504246 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
LINC00461-203ENST00000504246 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
LINC00461-203ENST00000504246 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
LINC00461-203ENST00000504246 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
LINC00461-203ENST00000504246 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
LINC00461-203ENST00000504246 WIZO95785 1651 aa29.47■■■□□ 2.31
LINC00461-203ENST00000504246 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
LINC00461-203ENST00000504246 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
LINC00461-203ENST00000504246 ZEB1P37275 1124 aaPredicted RBP29.27■■■□□ 2.28
LINC00461-203ENST00000504246 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
LINC00461-203ENST00000504246 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
LINC00461-203ENST00000504246 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
LINC00461-203ENST00000504246 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
LINC00461-203ENST00000504246 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
LINC00461-203ENST00000504246 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
LINC00461-203ENST00000504246 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
LINC00461-203ENST00000504246 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
LINC00461-203ENST00000504246 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
LINC00461-203ENST00000504246 WRNQ14191 1432 aaPredicted RBP eCLIP28.64■■■□□ 2.18
LINC00461-203ENST00000504246 EEA1Q15075 1411 aa28.63■■■□□ 2.17
LINC00461-203ENST00000504246 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
LINC00461-203ENST00000504246 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
LINC00461-203ENST00000504246 CEP162Q5TB80 1403 aa28.56■■■□□ 2.16
LINC00461-203ENST00000504246 SOGA1O94964 1423 aa28.55■■■□□ 2.16
LINC00461-203ENST00000504246 TNIKQ9UKE5 1360 aa28.55■■■□□ 2.16
LINC00461-203ENST00000504246 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.14
LINC00461-203ENST00000504246 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
LINC00461-203ENST00000504246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
LINC00461-203ENST00000504246 GOLGA3Q08378 1498 aa28.37■■■□□ 2.13
LINC00461-203ENST00000504246 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
LINC00461-203ENST00000504246 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
LINC00461-203ENST00000504246 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
LINC00461-203ENST00000504246 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
LINC00461-203ENST00000504246 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
LINC00461-203ENST00000504246 CEP164Q9UPV0 1460 aa28.2■■■□□ 2.11
LINC00461-203ENST00000504246 KIF21BO75037 1637 aa28.19■■■□□ 2.1
LINC00461-203ENST00000504246 TTBK1Q5TCY1 1321 aaPredicted RBP28.17■■■□□ 2.1
LINC00461-203ENST00000504246 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
LINC00461-203ENST00000504246 CLIP1P30622 1438 aa28.01■■■□□ 2.07
LINC00461-203ENST00000504246 DIEXFQ68CQ4 756 aaKnown RBP27.95■■■□□ 2.06
LINC00461-203ENST00000504246 VPS8Q8N3P4 1428 aa27.93■■■□□ 2.06
LINC00461-203ENST00000504246 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
LINC00461-203ENST00000504246 RAPGEF2Q9Y4G8 1499 aa27.88■■■□□ 2.05
LINC00461-203ENST00000504246 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
LINC00461-203ENST00000504246 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
LINC00461-203ENST00000504246 PELP1Q8IZL8 1130 aaKnown RBP27.84■■■□□ 2.05
LINC00461-203ENST00000504246 ACIN1Q9UKV3 1341 aaKnown RBP27.83■■■□□ 2.04
LINC00461-203ENST00000504246 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
LINC00461-203ENST00000504246 APLP2Q06481 763 aa27.78■■■□□ 2.04
LINC00461-203ENST00000504246 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
LINC00461-203ENST00000504246 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
LINC00461-203ENST00000504246 CENPBP07199 599 aaPredicted RBP27.73■■■□□ 2.03
LINC00461-203ENST00000504246 HNRNPUL2Q1KMD3 747 aaKnown RBP27.7■■■□□ 2.03
LINC00461-203ENST00000504246 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
LINC00461-203ENST00000504246 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
LINC00461-203ENST00000504246 CUX1P39880 1505 aa27.61■■■□□ 2.01
LINC00461-203ENST00000504246 CFTRP13569 1480 aa27.56■■■□□ 2
LINC00461-203ENST00000504246 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
LINC00461-203ENST00000504246 ARAP1Q96P48 1450 aa27.53■■■□□ 2
LINC00461-203ENST00000504246 KIF27Q86VH2 1401 aa27.52■■■□□ 2
LINC00461-203ENST00000504246 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
LINC00461-203ENST00000504246 GTF3C3Q9Y5Q9 886 aa27.45■■□□□ 1.98
LINC00461-203ENST00000504246 CLSPNQ9HAW4 1339 aa27.42■■□□□ 1.98
LINC00461-203ENST00000504246 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
LINC00461-203ENST00000504246 KANK4Q5T7N3 995 aaPredicted RBP27.3■■□□□ 1.96
LINC00461-203ENST00000504246 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
LINC00461-203ENST00000504246 MIER1Q8N108 512 aa27.28■■□□□ 1.96
LINC00461-203ENST00000504246 ARHGAP35Q9NRY4 1499 aa27.27■■□□□ 1.96
LINC00461-203ENST00000504246 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
LINC00461-203ENST00000504246 CUX2O14529 1486 aa27.2■■□□□ 1.94
LINC00461-203ENST00000504246 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
LINC00461-203ENST00000504246 CCNB3Q8WWL7 1395 aa27.16■■□□□ 1.94
LINC00461-203ENST00000504246 IGF1RP08069 1367 aa27.14■■□□□ 1.94
LINC00461-203ENST00000504246 FGD5Q6ZNL6 1462 aa27.11■■□□□ 1.93
LINC00461-203ENST00000504246 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
LINC00461-203ENST00000504246 CC2D2AQ9P2K1 1620 aa27.07■■□□□ 1.92
LINC00461-203ENST00000504246 TIAM1Q13009 1591 aa27.04■■□□□ 1.92
LINC00461-203ENST00000504246 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
LINC00461-203ENST00000504246 FANCD2Q9BXW9 1451 aa26.97■■□□□ 1.91
LINC00461-203ENST00000504246 FHAD1B1AJZ9 1412 aa26.93■■□□□ 1.9
LINC00461-203ENST00000504246 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
LINC00461-203ENST00000504246 DNMBPQ6XZF7 1577 aa26.91■■□□□ 1.9
LINC00461-203ENST00000504246 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms