RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
LINC00461-203ENST00000504246 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
LINC00461-203ENST00000504246 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
LINC00461-203ENST00000504246 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
LINC00461-203ENST00000504246 SUPT5HO00267 1087 aaKnown RBP31.85■■■□□ 2.69
LINC00461-203ENST00000504246 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
LINC00461-203ENST00000504246 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
LINC00461-203ENST00000504246 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
LINC00461-203ENST00000504246 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
LINC00461-203ENST00000504246 ABCC9O60706 1549 aa30.53■■■□□ 2.48
LINC00461-203ENST00000504246 HRCP23327 699 aa30.44■■■□□ 2.46
LINC00461-203ENST00000504246 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
LINC00461-203ENST00000504246 PCGF6Q9BYE7 350 aa30.23■■■□□ 2.43
LINC00461-203ENST00000504246 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
LINC00461-203ENST00000504246 NACADO15069 1562 aa30.1■■■□□ 2.41
LINC00461-203ENST00000504246 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
LINC00461-203ENST00000504246 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
LINC00461-203ENST00000504246 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
LINC00461-203ENST00000504246 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
LINC00461-203ENST00000504246 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
LINC00461-203ENST00000504246 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
LINC00461-203ENST00000504246 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
LINC00461-203ENST00000504246 WIZO95785 1651 aa29.47■■■□□ 2.31
LINC00461-203ENST00000504246 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
LINC00461-203ENST00000504246 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
LINC00461-203ENST00000504246 ZEB1P37275 1124 aaPredicted RBP29.27■■■□□ 2.28
LINC00461-203ENST00000504246 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
LINC00461-203ENST00000504246 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
LINC00461-203ENST00000504246 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
LINC00461-203ENST00000504246 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
LINC00461-203ENST00000504246 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
LINC00461-203ENST00000504246 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
LINC00461-203ENST00000504246 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
LINC00461-203ENST00000504246 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
LINC00461-203ENST00000504246 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
LINC00461-203ENST00000504246 WRNQ14191 1432 aaPredicted RBP eCLIP28.64■■■□□ 2.18
LINC00461-203ENST00000504246 EEA1Q15075 1411 aa28.63■■■□□ 2.17
LINC00461-203ENST00000504246 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
LINC00461-203ENST00000504246 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
LINC00461-203ENST00000504246 CEP162Q5TB80 1403 aa28.56■■■□□ 2.16
LINC00461-203ENST00000504246 SOGA1O94964 1423 aa28.55■■■□□ 2.16
LINC00461-203ENST00000504246 TNIKQ9UKE5 1360 aa28.55■■■□□ 2.16
LINC00461-203ENST00000504246 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.14
LINC00461-203ENST00000504246 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
LINC00461-203ENST00000504246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
LINC00461-203ENST00000504246 GOLGA3Q08378 1498 aa28.37■■■□□ 2.13
LINC00461-203ENST00000504246 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
LINC00461-203ENST00000504246 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
LINC00461-203ENST00000504246 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
LINC00461-203ENST00000504246 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
LINC00461-203ENST00000504246 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
LINC00461-203ENST00000504246 CEP164Q9UPV0 1460 aa28.2■■■□□ 2.11
LINC00461-203ENST00000504246 KIF21BO75037 1637 aa28.19■■■□□ 2.1
LINC00461-203ENST00000504246 TTBK1Q5TCY1 1321 aaPredicted RBP28.17■■■□□ 2.1
LINC00461-203ENST00000504246 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
LINC00461-203ENST00000504246 CLIP1P30622 1438 aa28.01■■■□□ 2.07
LINC00461-203ENST00000504246 DIEXFQ68CQ4 756 aaKnown RBP27.95■■■□□ 2.06
LINC00461-203ENST00000504246 VPS8Q8N3P4 1428 aa27.93■■■□□ 2.06
LINC00461-203ENST00000504246 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
LINC00461-203ENST00000504246 RAPGEF2Q9Y4G8 1499 aa27.88■■■□□ 2.05
LINC00461-203ENST00000504246 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
LINC00461-203ENST00000504246 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
LINC00461-203ENST00000504246 PELP1Q8IZL8 1130 aaKnown RBP27.84■■■□□ 2.05
LINC00461-203ENST00000504246 ACIN1Q9UKV3 1341 aaKnown RBP27.83■■■□□ 2.04
LINC00461-203ENST00000504246 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
LINC00461-203ENST00000504246 APLP2Q06481 763 aa27.78■■■□□ 2.04
LINC00461-203ENST00000504246 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
LINC00461-203ENST00000504246 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
LINC00461-203ENST00000504246 CENPBP07199 599 aaPredicted RBP27.73■■■□□ 2.03
LINC00461-203ENST00000504246 HNRNPUL2Q1KMD3 747 aaKnown RBP27.7■■■□□ 2.03
LINC00461-203ENST00000504246 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
LINC00461-203ENST00000504246 PRXQ9BXM0 1461 aa27.66■■■□□ 2.02
LINC00461-203ENST00000504246 CUX1P39880 1505 aa27.61■■■□□ 2.01
LINC00461-203ENST00000504246 CFTRP13569 1480 aa27.56■■■□□ 2
LINC00461-203ENST00000504246 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
LINC00461-203ENST00000504246 ARAP1Q96P48 1450 aa27.53■■■□□ 2
LINC00461-203ENST00000504246 KIF27Q86VH2 1401 aa27.52■■■□□ 2
LINC00461-203ENST00000504246 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
LINC00461-203ENST00000504246 GTF3C3Q9Y5Q9 886 aa27.45■■□□□ 1.98
LINC00461-203ENST00000504246 CLSPNQ9HAW4 1339 aa27.42■■□□□ 1.98
LINC00461-203ENST00000504246 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
LINC00461-203ENST00000504246 KANK4Q5T7N3 995 aaPredicted RBP27.3■■□□□ 1.96
LINC00461-203ENST00000504246 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
LINC00461-203ENST00000504246 MIER1Q8N108 512 aa27.28■■□□□ 1.96
LINC00461-203ENST00000504246 ARHGAP35Q9NRY4 1499 aa27.27■■□□□ 1.96
LINC00461-203ENST00000504246 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
LINC00461-203ENST00000504246 CUX2O14529 1486 aa27.2■■□□□ 1.94
LINC00461-203ENST00000504246 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
LINC00461-203ENST00000504246 CCNB3Q8WWL7 1395 aa27.16■■□□□ 1.94
LINC00461-203ENST00000504246 IGF1RP08069 1367 aa27.14■■□□□ 1.94
LINC00461-203ENST00000504246 FGD5Q6ZNL6 1462 aa27.11■■□□□ 1.93
LINC00461-203ENST00000504246 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
LINC00461-203ENST00000504246 CC2D2AQ9P2K1 1620 aa27.07■■□□□ 1.92
LINC00461-203ENST00000504246 TIAM1Q13009 1591 aa27.04■■□□□ 1.92
LINC00461-203ENST00000504246 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
LINC00461-203ENST00000504246 FANCD2Q9BXW9 1451 aa26.97■■□□□ 1.91
LINC00461-203ENST00000504246 FHAD1B1AJZ9 1412 aa26.93■■□□□ 1.9
LINC00461-203ENST00000504246 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
LINC00461-203ENST00000504246 DNMBPQ6XZF7 1577 aa26.91■■□□□ 1.9
LINC00461-203ENST00000504246 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 1000.2 ms