RNA–Protein interactions for RNA: ENST00000421127.6

CCDC17-202, Transcript of coiled-coil domain containing 17, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC17, Length 2,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-202ENST00000421127 NISCHQ9Y2I1 1504 aa38.08■■■■□ 3.69
CCDC17-202ENST00000421127 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
CCDC17-202ENST00000421127 SHROOM4Q9ULL8 1493 aa32.11■■■□□ 2.73
CCDC17-202ENST00000421127 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
CCDC17-202ENST00000421127 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
CCDC17-202ENST00000421127 SUPT5HO00267 1087 aaKnown RBP31.68■■■□□ 2.66
CCDC17-202ENST00000421127 ABCC9O60706 1549 aa31.56■■■□□ 2.64
CCDC17-202ENST00000421127 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
CCDC17-202ENST00000421127 CHIC1Q5VXU3 224 aa31.03■■■□□ 2.56
CCDC17-202ENST00000421127 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
CCDC17-202ENST00000421127 NACADO15069 1562 aa30.82■■■□□ 2.52
CCDC17-202ENST00000421127 HRCP23327 699 aa30.77■■■□□ 2.52
CCDC17-202ENST00000421127 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
CCDC17-202ENST00000421127 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
CCDC17-202ENST00000421127 PCGF6Q9BYE7 350 aa30.43■■■□□ 2.46
CCDC17-202ENST00000421127 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
CCDC17-202ENST00000421127 LOC105371045A0A1W2PR82 267 aa30.06■■■□□ 2.4
CCDC17-202ENST00000421127 PPARGC1BQ86YN6 1023 aaKnown RBP29.96■■■□□ 2.39
CCDC17-202ENST00000421127 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
CCDC17-202ENST00000421127 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
CCDC17-202ENST00000421127 BICRAQ9NZM4 1560 aa29.8■■■□□ 2.36
CCDC17-202ENST00000421127 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
CCDC17-202ENST00000421127 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
CCDC17-202ENST00000421127 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
CCDC17-202ENST00000421127 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
CCDC17-202ENST00000421127 ZEB1P37275 1124 aaPredicted RBP29.43■■■□□ 2.3
CCDC17-202ENST00000421127 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
CCDC17-202ENST00000421127 WIZO95785 1651 aa29.29■■■□□ 2.28
CCDC17-202ENST00000421127 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
CCDC17-202ENST00000421127 FAM9AQ8IZU1 332 aaPredicted RBP29.24■■■□□ 2.27
CCDC17-202ENST00000421127 EHMT2Q96KQ7 1210 aa28.93■■■□□ 2.22
CCDC17-202ENST00000421127 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
CCDC17-202ENST00000421127 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
CCDC17-202ENST00000421127 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
CCDC17-202ENST00000421127 ATAD2BQ9ULI0 1458 aa28.82■■■□□ 2.2
CCDC17-202ENST00000421127 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
CCDC17-202ENST00000421127 CCDC88BA6NC98 1476 aa28.65■■■□□ 2.18
CCDC17-202ENST00000421127 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.18
CCDC17-202ENST00000421127 PELP1Q8IZL8 1130 aaKnown RBP28.58■■■□□ 2.17
CCDC17-202ENST00000421127 SCAF1Q9H7N4 1312 aaKnown RBP28.55■■■□□ 2.16
CCDC17-202ENST00000421127 NCAPD3P42695 1498 aa28.5■■■□□ 2.15
CCDC17-202ENST00000421127 CCER1Q8TC90 406 aaPredicted RBP28.5■■■□□ 2.15
CCDC17-202ENST00000421127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.49■■■□□ 2.15
CCDC17-202ENST00000421127 WRNQ14191 1432 aaPredicted RBP eCLIP28.49■■■□□ 2.15
CCDC17-202ENST00000421127 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
CCDC17-202ENST00000421127 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
CCDC17-202ENST00000421127 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
CCDC17-202ENST00000421127 CEP162Q5TB80 1403 aa28.37■■■□□ 2.13
CCDC17-202ENST00000421127 TNIKQ9UKE5 1360 aa28.31■■■□□ 2.12
CCDC17-202ENST00000421127 EEA1Q15075 1411 aa28.3■■■□□ 2.12
CCDC17-202ENST00000421127 SOGA1O94964 1423 aa28.26■■■□□ 2.11
CCDC17-202ENST00000421127 ACIN1Q9UKV3 1341 aaKnown RBP28.2■■■□□ 2.11
CCDC17-202ENST00000421127 CSRNP3Q8WYN3 585 aa28.16■■■□□ 2.1
CCDC17-202ENST00000421127 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
CCDC17-202ENST00000421127 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
CCDC17-202ENST00000421127 GOLGA3Q08378 1498 aa28.1■■■□□ 2.09
CCDC17-202ENST00000421127 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.09
CCDC17-202ENST00000421127 NEUROD1Q13562 356 aa28.07■■■□□ 2.08
CCDC17-202ENST00000421127 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
CCDC17-202ENST00000421127 UBTFP17480 764 aaKnown RBP28.06■■■□□ 2.08
CCDC17-202ENST00000421127 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
CCDC17-202ENST00000421127 CFTRP13569 1480 aa27.91■■■□□ 2.06
CCDC17-202ENST00000421127 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
CCDC17-202ENST00000421127 KIF21BO75037 1637 aa27.89■■■□□ 2.06
CCDC17-202ENST00000421127 ZNF316A6NFI3 1004 aaPredicted RBP27.87■■■□□ 2.05
CCDC17-202ENST00000421127 GTF3C3Q9Y5Q9 886 aa27.84■■■□□ 2.05
CCDC17-202ENST00000421127 SYNJ1O43426 1573 aa27.83■■■□□ 2.05
CCDC17-202ENST00000421127 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
CCDC17-202ENST00000421127 CLIP1P30622 1438 aa27.76■■■□□ 2.04
CCDC17-202ENST00000421127 NESP48681 1621 aa27.75■■■□□ 2.03
CCDC17-202ENST00000421127 VPS8Q8N3P4 1428 aa27.71■■■□□ 2.03
CCDC17-202ENST00000421127 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
CCDC17-202ENST00000421127 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
CCDC17-202ENST00000421127 CUX1P39880 1505 aa27.58■■■□□ 2.01
CCDC17-202ENST00000421127 RAPGEF2Q9Y4G8 1499 aa27.58■■■□□ 2.01
CCDC17-202ENST00000421127 APLP2Q06481 763 aa27.58■■■□□ 2.01
CCDC17-202ENST00000421127 TOP2BQ02880 1626 aa27.56■■■□□ 2
CCDC17-202ENST00000421127 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
CCDC17-202ENST00000421127 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
CCDC17-202ENST00000421127 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
CCDC17-202ENST00000421127 MIER1Q8N108 512 aa27.47■■□□□ 1.99
CCDC17-202ENST00000421127 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
CCDC17-202ENST00000421127 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
CCDC17-202ENST00000421127 CLSPNQ9HAW4 1339 aa27.34■■□□□ 1.97
CCDC17-202ENST00000421127 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
CCDC17-202ENST00000421127 KIF21AQ7Z4S6 1674 aa27.31■■□□□ 1.96
CCDC17-202ENST00000421127 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
CCDC17-202ENST00000421127 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
CCDC17-202ENST00000421127 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
CCDC17-202ENST00000421127 MYT1Q01538 1121 aa27.26■■□□□ 1.96
CCDC17-202ENST00000421127 FGD5Q6ZNL6 1462 aa27.26■■□□□ 1.95
CCDC17-202ENST00000421127 URB2Q14146 1524 aaKnown RBP27.24■■□□□ 1.95
CCDC17-202ENST00000421127 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
CCDC17-202ENST00000421127 DHX57Q6P158 1386 aaKnown RBP27.23■■□□□ 1.95
CCDC17-202ENST00000421127 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
CCDC17-202ENST00000421127 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
CCDC17-202ENST00000421127 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
CCDC17-202ENST00000421127 RRBP1Q9P2E9 1410 aaKnown RBP27.13■■□□□ 1.93
CCDC17-202ENST00000421127 KANK4Q5T7N3 995 aaPredicted RBP27.1■■□□□ 1.93
CCDC17-202ENST00000421127 KIF27Q86VH2 1401 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms