RNA–Protein interactions for RNA: ENST00000337738.5

PTPA-201, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-201ENST00000337738 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
PTPA-201ENST00000337738 SHROOM4Q9ULL8 1493 aa32.57■■■□□ 2.8
PTPA-201ENST00000337738 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
PTPA-201ENST00000337738 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.76
PTPA-201ENST00000337738 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
PTPA-201ENST00000337738 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.66
PTPA-201ENST00000337738 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
PTPA-201ENST00000337738 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
PTPA-201ENST00000337738 MYO15BQ96JP2 1530 aa30.9■■■□□ 2.54
PTPA-201ENST00000337738 ABCC9O60706 1549 aa30.46■■■□□ 2.47
PTPA-201ENST00000337738 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
PTPA-201ENST00000337738 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
PTPA-201ENST00000337738 HRCP23327 699 aa30.13■■■□□ 2.41
PTPA-201ENST00000337738 PCGF6Q9BYE7 350 aa30.13■■■□□ 2.41
PTPA-201ENST00000337738 LOC105371045A0A1W2PR82 267 aa30.13■■■□□ 2.41
PTPA-201ENST00000337738 NACADO15069 1562 aa29.99■■■□□ 2.39
PTPA-201ENST00000337738 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
PTPA-201ENST00000337738 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
PTPA-201ENST00000337738 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
PTPA-201ENST00000337738 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
PTPA-201ENST00000337738 TRIM26Q12899 539 aaPredicted RBP29.57■■■□□ 2.32
PTPA-201ENST00000337738 FAM9AQ8IZU1 332 aaPredicted RBP29.54■■■□□ 2.32
PTPA-201ENST00000337738 WIZO95785 1651 aa29.5■■■□□ 2.31
PTPA-201ENST00000337738 PPARGC1BQ86YN6 1023 aaKnown RBP29.49■■■□□ 2.31
PTPA-201ENST00000337738 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
PTPA-201ENST00000337738 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
PTPA-201ENST00000337738 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
PTPA-201ENST00000337738 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
PTPA-201ENST00000337738 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
PTPA-201ENST00000337738 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
PTPA-201ENST00000337738 ZEB1P37275 1124 aaPredicted RBP28.96■■■□□ 2.23
PTPA-201ENST00000337738 CCDC88BA6NC98 1476 aa28.92■■■□□ 2.22
PTPA-201ENST00000337738 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
PTPA-201ENST00000337738 ABCC8Q09428 1581 aa28.85■■■□□ 2.21
PTPA-201ENST00000337738 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
PTPA-201ENST00000337738 PELP1Q8IZL8 1130 aaKnown RBP28.71■■■□□ 2.19
PTPA-201ENST00000337738 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PTPA-201ENST00000337738 SOGA1O94964 1423 aa28.58■■■□□ 2.17
PTPA-201ENST00000337738 CEP162Q5TB80 1403 aa28.49■■■□□ 2.15
PTPA-201ENST00000337738 EEA1Q15075 1411 aa28.49■■■□□ 2.15
PTPA-201ENST00000337738 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
PTPA-201ENST00000337738 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
PTPA-201ENST00000337738 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
PTPA-201ENST00000337738 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.141e-6■■□□□ 12
PTPA-201ENST00000337738 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
PTPA-201ENST00000337738 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
PTPA-201ENST00000337738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.38■■■□□ 2.13
PTPA-201ENST00000337738 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
PTPA-201ENST00000337738 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
PTPA-201ENST00000337738 GOLGA3Q08378 1498 aa28.3■■■□□ 2.12
PTPA-201ENST00000337738 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
PTPA-201ENST00000337738 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
PTPA-201ENST00000337738 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
PTPA-201ENST00000337738 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
PTPA-201ENST00000337738 KIF21BO75037 1637 aa28.07■■■□□ 2.08
PTPA-201ENST00000337738 CLIP1P30622 1438 aa27.97■■■□□ 2.07
PTPA-201ENST00000337738 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
PTPA-201ENST00000337738 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
PTPA-201ENST00000337738 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
PTPA-201ENST00000337738 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
PTPA-201ENST00000337738 APLP2Q06481 763 aa27.81■■■□□ 2.04
PTPA-201ENST00000337738 SCAF1Q9H7N4 1312 aaKnown RBP27.8■■■□□ 2.04
PTPA-201ENST00000337738 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
PTPA-201ENST00000337738 DIEXFQ68CQ4 756 aaKnown RBP27.77■■■□□ 2.04
PTPA-201ENST00000337738 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
PTPA-201ENST00000337738 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
PTPA-201ENST00000337738 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
PTPA-201ENST00000337738 MYT1Q01538 1121 aa27.71■■■□□ 2.03
PTPA-201ENST00000337738 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
PTPA-201ENST00000337738 CUX1P39880 1505 aa27.61■■■□□ 2.01
PTPA-201ENST00000337738 PRXQ9BXM0 1461 aa27.61■■■□□ 2.01
PTPA-201ENST00000337738 ZNF316A6NFI3 1004 aaPredicted RBP27.57■■■□□ 2
PTPA-201ENST00000337738 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
PTPA-201ENST00000337738 KIF27Q86VH2 1401 aa27.53■■■□□ 2
PTPA-201ENST00000337738 CFTRP13569 1480 aa27.52■■■□□ 2
PTPA-201ENST00000337738 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
PTPA-201ENST00000337738 NEUROD1Q13562 356 aa27.47■■□□□ 1.99
PTPA-201ENST00000337738 CENPBP07199 599 aaPredicted RBP27.44■■□□□ 1.98
PTPA-201ENST00000337738 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
PTPA-201ENST00000337738 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
PTPA-201ENST00000337738 CUX2O14529 1486 aa27.26■■□□□ 1.95
PTPA-201ENST00000337738 ARHGAP35Q9NRY4 1499 aa27.25■■□□□ 1.95
PTPA-201ENST00000337738 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
PTPA-201ENST00000337738 GTF3C3Q9Y5Q9 886 aa27.21■■□□□ 1.95
PTPA-201ENST00000337738 IGF1RP08069 1367 aa27.18■■□□□ 1.94
PTPA-201ENST00000337738 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
PTPA-201ENST00000337738 RRBP1Q9P2E9 1410 aaKnown RBP27.17■■□□□ 1.94
PTPA-201ENST00000337738 CLSPNQ9HAW4 1339 aa27.17■■□□□ 1.94
PTPA-201ENST00000337738 MIER1Q8N108 512 aa27.14■■□□□ 1.94
PTPA-201ENST00000337738 YTHDC1Q96MU7 727 aaKnown RBP27.14■■□□□ 1.93
PTPA-201ENST00000337738 FGD5Q6ZNL6 1462 aa27.14■■□□□ 1.93
PTPA-201ENST00000337738 CARMIL1Q5VZK9 1371 aa27.1■■□□□ 1.93
PTPA-201ENST00000337738 CCNB3Q8WWL7 1395 aa27.09■■□□□ 1.93
PTPA-201ENST00000337738 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
PTPA-201ENST00000337738 ITGAEP38570 1179 aa27.03■■□□□ 1.92
PTPA-201ENST00000337738 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
PTPA-201ENST00000337738 TIAM1Q13009 1591 aa26.97■■□□□ 1.91
PTPA-201ENST00000337738 MAP3K1Q13233 1512 aa26.93■■□□□ 1.9
PTPA-201ENST00000337738 P3H3Q8IVL6 736 aa26.88■■□□□ 1.89
PTPA-201ENST00000337738 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms