RNA–Protein interactions for RNA: ENST00000542042.5

CYB561-205, Transcript of cytochrome b561, humanhuman

TSL 2 BASIC

Gene CYB561, Length 1,302 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-205ENST00000542042 NISCHQ9Y2I1 1504 aa45.99■■■■■ 4.95
CYB561-205ENST00000542042 CCDC180Q9P1Z9 1646 aa41.14■■■■■ 4.18
CYB561-205ENST00000542042 ABCC9O60706 1549 aa40.53■■■■■ 4.08
CYB561-205ENST00000542042 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.81
CYB561-205ENST00000542042 NACADO15069 1562 aa38.68■■■■□ 3.78
CYB561-205ENST00000542042 DCAF8L2P0C7V8 631 aa38.38■■■■□ 3.73
CYB561-205ENST00000542042 MYO15BQ96JP2 1530 aa38.33■■■■□ 3.73
CYB561-205ENST00000542042 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
CYB561-205ENST00000542042 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
CYB561-205ENST00000542042 DCAF1Q9Y4B6 1507 aa38.03■■■■□ 3.68
CYB561-205ENST00000542042 BICRAQ9NZM4 1560 aa37.78■■■■□ 3.64
CYB561-205ENST00000542042 PABPN1Q86U42 306 aaKnown RBP eCLIP37.75■■■■□ 3.63
CYB561-205ENST00000542042 DNAJC5BQ9UF47 199 aa37.57■■■■□ 3.6
CYB561-205ENST00000542042 SCRIBQ14160 1630 aa37.49■■■■□ 3.59
CYB561-205ENST00000542042 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
CYB561-205ENST00000542042 EIF4G1Q04637 1599 aaKnown RBP36.75■■■■□ 3.47
CYB561-205ENST00000542042 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
CYB561-205ENST00000542042 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
CYB561-205ENST00000542042 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
CYB561-205ENST00000542042 NCAPD3P42695 1498 aa35.68■■■■□ 3.3
CYB561-205ENST00000542042 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
CYB561-205ENST00000542042 BAZ1AQ9NRL2 1556 aaPredicted RBP35.65■■■■□ 3.3
CYB561-205ENST00000542042 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
CYB561-205ENST00000542042 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
CYB561-205ENST00000542042 PEG3Q9GZU2 1588 aa35.48■■■■□ 3.27
CYB561-205ENST00000542042 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
CYB561-205ENST00000542042 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
CYB561-205ENST00000542042 WIZO95785 1651 aa35.12■■■■□ 3.21
CYB561-205ENST00000542042 NESP48681 1621 aa35.02■■■■□ 3.2
CYB561-205ENST00000542042 ERCC6Q03468 1493 aa34.89■■■■□ 3.18
CYB561-205ENST00000542042 RSF1Q96T23 1441 aaPredicted RBP34.87■■■■□ 3.17
CYB561-205ENST00000542042 LAMC3Q9Y6N6 1575 aa34.84■■■■□ 3.17
CYB561-205ENST00000542042 CUX2O14529 1486 aa34.71■■■■□ 3.15
CYB561-205ENST00000542042 KIF21AQ7Z4S6 1674 aa34.68■■■■□ 3.14
CYB561-205ENST00000542042 TOP2AP11388 1531 aaKnown RBP34.67■■■■□ 3.14
CYB561-205ENST00000542042 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
CYB561-205ENST00000542042 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
CYB561-205ENST00000542042 PDS5BQ9NTI5 1447 aa34.51■■■■□ 3.11
CYB561-205ENST00000542042 CFTRP13569 1480 aa34.34■■■■□ 3.09
CYB561-205ENST00000542042 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
CYB561-205ENST00000542042 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
CYB561-205ENST00000542042 CCDC88BA6NC98 1476 aa34.23■■■■□ 3.07
CYB561-205ENST00000542042 FANCD2Q9BXW9 1451 aa34.22■■■■□ 3.07
CYB561-205ENST00000542042 WDR62O43379 1518 aa34.22■■■■□ 3.07
CYB561-205ENST00000542042 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
CYB561-205ENST00000542042 DNAJC5Q9H3Z4 198 aa34.04■■■■□ 3.04
CYB561-205ENST00000542042 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
CYB561-205ENST00000542042 TOPBP1Q92547 1522 aa33.67■■■□□ 2.98
CYB561-205ENST00000542042 DNMBPQ6XZF7 1577 aa33.61■■■□□ 2.97
CYB561-205ENST00000542042 SUPT5HO00267 1087 aaKnown RBP33.56■■■□□ 2.96
CYB561-205ENST00000542042 ABCC8Q09428 1581 aa33.54■■■□□ 2.96
CYB561-205ENST00000542042 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
CYB561-205ENST00000542042 ZNF608Q9ULD9 1512 aaPredicted RBP33.45■■■□□ 2.95
CYB561-205ENST00000542042 TARBP1Q13395 1621 aaKnown RBP33.4■■■□□ 2.94
CYB561-205ENST00000542042 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
CYB561-205ENST00000542042 POLA1P09884 1462 aaPredicted RBP33.35■■■□□ 2.93
CYB561-205ENST00000542042 CUX1P39880 1505 aa33.31■■■□□ 2.92
CYB561-205ENST00000542042 FGD5Q6ZNL6 1462 aa33.21■■■□□ 2.91
CYB561-205ENST00000542042 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
CYB561-205ENST00000542042 AQRO60306 1485 aaKnown RBP eCLIP33.16■■■□□ 2.93e-7■■■■■ 51.1
CYB561-205ENST00000542042 SOGA1O94964 1423 aa33.13■■■□□ 2.89
CYB561-205ENST00000542042 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
CYB561-205ENST00000542042 OSCARQ8IYS5 282 aa33.08■■■□□ 2.89
CYB561-205ENST00000542042 CHD1O14646 1710 aa33.06■■■□□ 2.88
CYB561-205ENST00000542042 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.87
CYB561-205ENST00000542042 BIVM-ERCC5R4GMW8 1640 aa32.96■■■□□ 2.87
CYB561-205ENST00000542042 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
CYB561-205ENST00000542042 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
CYB561-205ENST00000542042 PBRM1Q86U86 1689 aa32.89■■■□□ 2.86
CYB561-205ENST00000542042 SNAPC4Q5SXM2 1469 aa32.87■■■□□ 2.85
CYB561-205ENST00000542042 ABCA10Q8WWZ4 1543 aa32.86■■■□□ 2.85
CYB561-205ENST00000542042 ABCA5Q8WWZ7 1642 aa32.86■■■□□ 2.85
CYB561-205ENST00000542042 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.859e-6■■■■■ 50.1
CYB561-205ENST00000542042 GRIN2BQ13224 1484 aa32.81■■■□□ 2.84
CYB561-205ENST00000542042 RIMBP3CA6NJZ7 1639 aa32.81■■■□□ 2.84
CYB561-205ENST00000542042 RIMBP3BA6NNM3 1639 aa32.81■■■□□ 2.84
CYB561-205ENST00000542042 RIMBP3Q9UFD9 1639 aa32.81■■■□□ 2.84
CYB561-205ENST00000542042 MAGI1Q96QZ7 1491 aaPredicted RBP32.78■■■□□ 2.84
CYB561-205ENST00000542042 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
CYB561-205ENST00000542042 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
CYB561-205ENST00000542042 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
CYB561-205ENST00000542042 FBLN2P98095 1184 aa32.71■■■□□ 2.83
CYB561-205ENST00000542042 SYNJ2O15056 1496 aa32.66■■■□□ 2.82
CYB561-205ENST00000542042 CLASP1Q7Z460 1538 aa32.63■■■□□ 2.81
CYB561-205ENST00000542042 ADAMTS12P58397 1594 aa32.55■■■□□ 2.8
CYB561-205ENST00000542042 CHMP7Q8WUX9 453 aaPredicted RBP32.55■■■□□ 2.8
CYB561-205ENST00000542042 ERICH3Q5RHP9 1530 aa32.45■■■□□ 2.79
CYB561-205ENST00000542042 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
CYB561-205ENST00000542042 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
CYB561-205ENST00000542042 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
CYB561-205ENST00000542042 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
CYB561-205ENST00000542042 NUP160Q12769 1436 aa32.31■■■□□ 2.76
CYB561-205ENST00000542042 CYB5RLQ6IPT4 315 aa32.3■■■□□ 2.76
CYB561-205ENST00000542042 SHROOM2Q13796 1616 aa32.2■■■□□ 2.75
CYB561-205ENST00000542042 ERCC6L2Q5T890 1561 aa32.19■■■□□ 2.74
CYB561-205ENST00000542042 KIF27Q86VH2 1401 aa32.16■■■□□ 2.74
CYB561-205ENST00000542042 CUL7Q14999 1698 aa32.13■■■□□ 2.73
CYB561-205ENST00000542042 IGF1RP08069 1367 aa32.1■■■□□ 2.73
CYB561-205ENST00000542042 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
CYB561-205ENST00000542042 PRG4Q92954 1404 aaPredicted RBP31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms