RNA–Protein interactions for RNA: ENST00000370384.7

KHDC1-202, Transcript of KH domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KHDC1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-202ENST00000370384 NISCHQ9Y2I1 1504 aa44.08■■■■■ 4.65
KHDC1-202ENST00000370384 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
KHDC1-202ENST00000370384 ABCC9O60706 1549 aa37.45■■■■□ 3.59
KHDC1-202ENST00000370384 ZCCHC6Q5VYS8 1495 aaKnown RBP36.84■■■■□ 3.49
KHDC1-202ENST00000370384 DCAF8L2P0C7V8 631 aa36.82■■■■□ 3.48
KHDC1-202ENST00000370384 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
KHDC1-202ENST00000370384 NACADO15069 1562 aa36.3■■■■□ 3.4
KHDC1-202ENST00000370384 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
KHDC1-202ENST00000370384 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
KHDC1-202ENST00000370384 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
KHDC1-202ENST00000370384 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
KHDC1-202ENST00000370384 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
KHDC1-202ENST00000370384 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.23
KHDC1-202ENST00000370384 BICRAQ9NZM4 1560 aa35.11■■■■□ 3.21
KHDC1-202ENST00000370384 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
KHDC1-202ENST00000370384 EIF4G1Q04637 1599 aaKnown RBP34.12■■■■□ 3.05
KHDC1-202ENST00000370384 BAZ1AQ9NRL2 1556 aaPredicted RBP34.07■■■■□ 3.04
KHDC1-202ENST00000370384 MROH2BQ7Z745 1585 aa34.05■■■■□ 3.04
KHDC1-202ENST00000370384 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
KHDC1-202ENST00000370384 RSF1Q96T23 1441 aaPredicted RBP33.91■■■■□ 3.02
KHDC1-202ENST00000370384 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
KHDC1-202ENST00000370384 SUPT5HO00267 1087 aaKnown RBP33.8■■■■□ 3
KHDC1-202ENST00000370384 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
KHDC1-202ENST00000370384 WIZO95785 1651 aa33.73■■■□□ 2.99
KHDC1-202ENST00000370384 ATAD2BQ9ULI0 1458 aa33.7■■■□□ 2.99
KHDC1-202ENST00000370384 SMARCA2P51531 1590 aa33.62■■■□□ 2.97
KHDC1-202ENST00000370384 PEG3Q9GZU2 1588 aa33.62■■■□□ 2.97
KHDC1-202ENST00000370384 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
KHDC1-202ENST00000370384 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
KHDC1-202ENST00000370384 HMGXB3Q12766 1538 aa33.37■■■□□ 2.93
KHDC1-202ENST00000370384 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
KHDC1-202ENST00000370384 CCDC88BA6NC98 1476 aa33.02■■■□□ 2.88
KHDC1-202ENST00000370384 CADPSQ9ULU8 1353 aa32.64■■■□□ 2.82
KHDC1-202ENST00000370384 NESP48681 1621 aa32.63■■■□□ 2.81
KHDC1-202ENST00000370384 CFTRP13569 1480 aa32.56■■■□□ 2.8
KHDC1-202ENST00000370384 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
KHDC1-202ENST00000370384 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
KHDC1-202ENST00000370384 PDS5BQ9NTI5 1447 aa32.3■■■□□ 2.76
KHDC1-202ENST00000370384 FANCD2Q9BXW9 1451 aa32.27■■■□□ 2.76
KHDC1-202ENST00000370384 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
KHDC1-202ENST00000370384 ERCC6Q03468 1493 aa32.17■■■□□ 2.74
KHDC1-202ENST00000370384 CEP164Q9UPV0 1460 aa32.13■■■□□ 2.73
KHDC1-202ENST00000370384 ABCC8Q09428 1581 aa32.07■■■□□ 2.72
KHDC1-202ENST00000370384 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
KHDC1-202ENST00000370384 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
KHDC1-202ENST00000370384 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
KHDC1-202ENST00000370384 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
KHDC1-202ENST00000370384 CUX1P39880 1505 aa31.87■■■□□ 2.69
KHDC1-202ENST00000370384 THOC2Q8NI27 1593 aaKnown RBP31.84■■■□□ 2.69
KHDC1-202ENST00000370384 TOPBP1Q92547 1522 aa31.83■■■□□ 2.69
KHDC1-202ENST00000370384 SYNJ1O43426 1573 aa31.83■■■□□ 2.69
KHDC1-202ENST00000370384 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
KHDC1-202ENST00000370384 TRIM41Q8WV44 630 aa31.81■■■□□ 2.68
KHDC1-202ENST00000370384 WDR62O43379 1518 aa31.76■■■□□ 2.67
KHDC1-202ENST00000370384 TOP2BQ02880 1626 aa31.74■■■□□ 2.67
KHDC1-202ENST00000370384 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
KHDC1-202ENST00000370384 FGD5Q6ZNL6 1462 aa31.66■■■□□ 2.66
KHDC1-202ENST00000370384 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
KHDC1-202ENST00000370384 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
KHDC1-202ENST00000370384 SOGA1O94964 1423 aa31.54■■■□□ 2.64
KHDC1-202ENST00000370384 CUX2O14529 1486 aa31.52■■■□□ 2.64
KHDC1-202ENST00000370384 IFT140Q96RY7 1462 aa31.42■■■□□ 2.62
KHDC1-202ENST00000370384 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
KHDC1-202ENST00000370384 ABCA10Q8WWZ4 1543 aa31.33■■■□□ 2.61
KHDC1-202ENST00000370384 TDRD9Q8NDG6 1382 aaKnown RBP31.32■■■□□ 2.6
KHDC1-202ENST00000370384 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
KHDC1-202ENST00000370384 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
KHDC1-202ENST00000370384 WDR97A6NE52 1622 aa31.27■■■□□ 2.6
KHDC1-202ENST00000370384 FAM9AQ8IZU1 332 aaPredicted RBP31.26■■■□□ 2.6
KHDC1-202ENST00000370384 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.59
KHDC1-202ENST00000370384 KIF27Q86VH2 1401 aa31.2■■■□□ 2.58
KHDC1-202ENST00000370384 GAPVD1Q14C86 1478 aa31.15■■■□□ 2.58
KHDC1-202ENST00000370384 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
KHDC1-202ENST00000370384 ABCA5Q8WWZ7 1642 aa31.12■■■□□ 2.57
KHDC1-202ENST00000370384 IGF1RP08069 1367 aa31.05■■■□□ 2.56
KHDC1-202ENST00000370384 CSRNP3Q8WYN3 585 aa31.04■■■□□ 2.56
KHDC1-202ENST00000370384 EEA1Q15075 1411 aa31.03■■■□□ 2.56
KHDC1-202ENST00000370384 GRIN2BQ13224 1484 aa31.02■■■□□ 2.56
KHDC1-202ENST00000370384 PBRM1Q86U86 1689 aa31■■■□□ 2.55
KHDC1-202ENST00000370384 ERICH3Q5RHP9 1530 aa30.95■■■□□ 2.54
KHDC1-202ENST00000370384 SNAPC4Q5SXM2 1469 aa30.92■■■□□ 2.54
KHDC1-202ENST00000370384 EHMT2Q96KQ7 1210 aa30.9■■■□□ 2.54
KHDC1-202ENST00000370384 CARMIL1Q5VZK9 1371 aa30.87■■■□□ 2.53
KHDC1-202ENST00000370384 FBLN2P98095 1184 aa30.81■■■□□ 2.52
KHDC1-202ENST00000370384 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
KHDC1-202ENST00000370384 CUL7Q14999 1698 aa30.79■■■□□ 2.52
KHDC1-202ENST00000370384 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
KHDC1-202ENST00000370384 PRXQ9BXM0 1461 aa30.78■■■□□ 2.52
KHDC1-202ENST00000370384 ADAMTS12P58397 1594 aa30.78■■■□□ 2.52
KHDC1-202ENST00000370384 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
KHDC1-202ENST00000370384 RAPGEF2Q9Y4G8 1499 aa30.73■■■□□ 2.51
KHDC1-202ENST00000370384 LOC105371045A0A1W2PR82 267 aa30.73■■■□□ 2.51
KHDC1-202ENST00000370384 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
KHDC1-202ENST00000370384 KIF21BO75037 1637 aa30.66■■■□□ 2.5
KHDC1-202ENST00000370384 GRIN2AQ12879 1464 aa30.62■■■□□ 2.49
KHDC1-202ENST00000370384 CHD1O14646 1710 aa30.62■■■□□ 2.49
KHDC1-202ENST00000370384 UBTFP17480 764 aaKnown RBP30.6■■■□□ 2.49
KHDC1-202ENST00000370384 GOLGA3Q08378 1498 aa30.6■■■□□ 2.49
KHDC1-202ENST00000370384 CEP170Q5SW79 1584 aa30.46■■■□□ 2.47
KHDC1-202ENST00000370384 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms