RNA–Protein interactions for RNA: ENST00000378425.9

FAM213B-202, Transcript of Prostamide/prostaglandin F synthase, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FAM213B, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-202ENST00000378425 NISCHQ9Y2I1 1504 aa38.26■■■■□ 3.72
FAM213B-202ENST00000378425 SHROOM4Q9ULL8 1493 aa32.94■■■□□ 2.86
FAM213B-202ENST00000378425 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.78
FAM213B-202ENST00000378425 ZCCHC6Q5VYS8 1495 aaKnown RBP32.31■■■□□ 2.76
FAM213B-202ENST00000378425 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
FAM213B-202ENST00000378425 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
FAM213B-202ENST00000378425 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
FAM213B-202ENST00000378425 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
FAM213B-202ENST00000378425 MYO15BQ96JP2 1530 aa31.07■■■□□ 2.57
FAM213B-202ENST00000378425 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
FAM213B-202ENST00000378425 ABCC9O60706 1549 aa30.51■■■□□ 2.47
FAM213B-202ENST00000378425 LOC105371045A0A1W2PR82 267 aa30.38■■■□□ 2.45
FAM213B-202ENST00000378425 RSF1Q96T23 1441 aaPredicted RBP30.31■■■□□ 2.44
FAM213B-202ENST00000378425 PCGF6Q9BYE7 350 aa30.12■■■□□ 2.41
FAM213B-202ENST00000378425 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
FAM213B-202ENST00000378425 RB1CC1Q8TDY2 1594 aa30.05■■■□□ 2.4
FAM213B-202ENST00000378425 NACADO15069 1562 aa30.01■■■□□ 2.39
FAM213B-202ENST00000378425 MROH2BQ7Z745 1585 aa29.87■■■□□ 2.37
FAM213B-202ENST00000378425 HRCP23327 699 aa29.87■■■□□ 2.37
FAM213B-202ENST00000378425 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
FAM213B-202ENST00000378425 TRIM41Q8WV44 630 aa29.82■■■□□ 2.36
FAM213B-202ENST00000378425 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
FAM213B-202ENST00000378425 WIZO95785 1651 aa29.73■■■□□ 2.35
FAM213B-202ENST00000378425 PPARGC1BQ86YN6 1023 aaKnown RBP29.61■■■□□ 2.33
FAM213B-202ENST00000378425 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
FAM213B-202ENST00000378425 TRIM26Q12899 539 aaPredicted RBP29.35■■■□□ 2.29
FAM213B-202ENST00000378425 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
FAM213B-202ENST00000378425 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
FAM213B-202ENST00000378425 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
FAM213B-202ENST00000378425 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
FAM213B-202ENST00000378425 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
FAM213B-202ENST00000378425 CCDC88BA6NC98 1476 aa29.08■■■□□ 2.25
FAM213B-202ENST00000378425 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
FAM213B-202ENST00000378425 SMARCA2P51531 1590 aa28.99■■■□□ 2.23
FAM213B-202ENST00000378425 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
FAM213B-202ENST00000378425 SOGA1O94964 1423 aa28.78■■■□□ 2.2
FAM213B-202ENST00000378425 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
FAM213B-202ENST00000378425 RUSC2Q8N2Y8 1516 aa28.72■■■□□ 2.19
FAM213B-202ENST00000378425 CSRNP3Q8WYN3 585 aa28.49■■■□□ 2.15
FAM213B-202ENST00000378425 CEP162Q5TB80 1403 aa28.48■■■□□ 2.15
FAM213B-202ENST00000378425 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
FAM213B-202ENST00000378425 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
FAM213B-202ENST00000378425 UBTFP17480 764 aaKnown RBP28.47■■■□□ 2.15
FAM213B-202ENST00000378425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
FAM213B-202ENST00000378425 WRNQ14191 1432 aaPredicted RBP eCLIP28.44■■■□□ 2.14
FAM213B-202ENST00000378425 ZEB1P37275 1124 aaPredicted RBP28.44■■■□□ 2.14
FAM213B-202ENST00000378425 SYNJ1O43426 1573 aa28.39■■■□□ 2.13
FAM213B-202ENST00000378425 BAZ1BQ9UIG0 1483 aaKnown RBP28.38■■■□□ 2.13
FAM213B-202ENST00000378425 TNIKQ9UKE5 1360 aa28.33■■■□□ 2.13
FAM213B-202ENST00000378425 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
FAM213B-202ENST00000378425 EEA1Q15075 1411 aa28.22■■■□□ 2.11
FAM213B-202ENST00000378425 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
FAM213B-202ENST00000378425 GOLGA3Q08378 1498 aa28.19■■■□□ 2.1
FAM213B-202ENST00000378425 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
FAM213B-202ENST00000378425 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
FAM213B-202ENST00000378425 KIF21BO75037 1637 aa27.96■■■□□ 2.07
FAM213B-202ENST00000378425 CLIP1P30622 1438 aa27.95■■■□□ 2.06
FAM213B-202ENST00000378425 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
FAM213B-202ENST00000378425 HNRNPUL2Q1KMD3 747 aaKnown RBP27.87■■■□□ 2.05
FAM213B-202ENST00000378425 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
FAM213B-202ENST00000378425 CUX1P39880 1505 aa27.78■■■□□ 2.04
FAM213B-202ENST00000378425 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
FAM213B-202ENST00000378425 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
FAM213B-202ENST00000378425 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.03
FAM213B-202ENST00000378425 APLP2Q06481 763 aa27.64■■■□□ 2.02
FAM213B-202ENST00000378425 CFTRP13569 1480 aa27.63■■■□□ 2.01
FAM213B-202ENST00000378425 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
FAM213B-202ENST00000378425 SCAF1Q9H7N4 1312 aaKnown RBP27.58■■■□□ 2.01
FAM213B-202ENST00000378425 DIEXFQ68CQ4 756 aaKnown RBP27.57■■■□□ 2
FAM213B-202ENST00000378425 KANK4Q5T7N3 995 aaPredicted RBP27.55■■■□□ 2
FAM213B-202ENST00000378425 ARAP1Q96P48 1450 aa27.55■■■□□ 2
FAM213B-202ENST00000378425 KIF27Q86VH2 1401 aa27.51■■□□□ 1.99
FAM213B-202ENST00000378425 ERICH3Q5RHP9 1530 aa27.5■■□□□ 1.99
FAM213B-202ENST00000378425 CUX2O14529 1486 aa27.39■■□□□ 1.98
FAM213B-202ENST00000378425 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
FAM213B-202ENST00000378425 NEUROD1Q13562 356 aa27.35■■□□□ 1.97
FAM213B-202ENST00000378425 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
FAM213B-202ENST00000378425 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
FAM213B-202ENST00000378425 IGF1RP08069 1367 aa27.33■■□□□ 1.97
FAM213B-202ENST00000378425 ARHGAP35Q9NRY4 1499 aa27.33■■□□□ 1.97
FAM213B-202ENST00000378425 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
FAM213B-202ENST00000378425 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
FAM213B-202ENST00000378425 ITGAEP38570 1179 aa27.24■■□□□ 1.95
FAM213B-202ENST00000378425 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
FAM213B-202ENST00000378425 P3H3Q8IVL6 736 aa27.21■■□□□ 1.95
FAM213B-202ENST00000378425 NESP48681 1621 aa27.2■■□□□ 1.94
FAM213B-202ENST00000378425 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
FAM213B-202ENST00000378425 FANCD2Q9BXW9 1451 aa27.16■■□□□ 1.94
FAM213B-202ENST00000378425 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
FAM213B-202ENST00000378425 DHX57Q6P158 1386 aaKnown RBP27.13■■□□□ 1.93
FAM213B-202ENST00000378425 YTHDC1Q96MU7 727 aaKnown RBP27.13■■□□□ 1.93
FAM213B-202ENST00000378425 MIER1Q8N108 512 aa27.11■■□□□ 1.93
FAM213B-202ENST00000378425 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
FAM213B-202ENST00000378425 RRBP1Q9P2E9 1410 aaKnown RBP27.07■■□□□ 1.92
FAM213B-202ENST00000378425 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
FAM213B-202ENST00000378425 CCNB3Q8WWL7 1395 aa27.03■■□□□ 1.92
FAM213B-202ENST00000378425 GTF3C3Q9Y5Q9 886 aa27.01■■□□□ 1.91
FAM213B-202ENST00000378425 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
FAM213B-202ENST00000378425 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
FAM213B-202ENST00000378425 TIAM1Q13009 1591 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms