RNA–Protein interactions for RNA: ENST00000515393.5

MCTP1-218, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCTP1, Length 5,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-218ENST00000515393 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
MCTP1-218ENST00000515393 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
MCTP1-218ENST00000515393 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
MCTP1-218ENST00000515393 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
MCTP1-218ENST00000515393 PELP1Q8IZL8 1130 aaKnown RBP29.66■■■□□ 2.34
MCTP1-218ENST00000515393 APLP2Q06481 763 aa29.18■■■□□ 2.26
MCTP1-218ENST00000515393 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
MCTP1-218ENST00000515393 ZEB1P37275 1124 aaPredicted RBP29.01■■■□□ 2.23
MCTP1-218ENST00000515393 PCGF6Q9BYE7 350 aa28.69■■■□□ 2.18
MCTP1-218ENST00000515393 CENPBP07199 599 aaPredicted RBP28.65■■■□□ 2.18
MCTP1-218ENST00000515393 FAM9AQ8IZU1 332 aaPredicted RBP28.64■■■□□ 2.18
MCTP1-218ENST00000515393 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
MCTP1-218ENST00000515393 CCER1Q8TC90 406 aaPredicted RBP28.28■■■□□ 2.12
MCTP1-218ENST00000515393 MYT1Q01538 1121 aa28.25■■■□□ 2.11
MCTP1-218ENST00000515393 ERICH6Q7L0X2 663 aa28.04■■■□□ 2.08
MCTP1-218ENST00000515393 TTBK1Q5TCY1 1321 aaPredicted RBP28.02■■■□□ 2.08
MCTP1-218ENST00000515393 TRIM26Q12899 539 aaPredicted RBP27.95■■■□□ 2.06
MCTP1-218ENST00000515393 UBTFP17480 764 aaKnown RBP27.94■■■□□ 2.06
MCTP1-218ENST00000515393 NEFLP07196 543 aa27.83■■■□□ 2.05
MCTP1-218ENST00000515393 HRCP23327 699 aa27.74■■■□□ 2.03
MCTP1-218ENST00000515393 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
MCTP1-218ENST00000515393 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
MCTP1-218ENST00000515393 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
MCTP1-218ENST00000515393 YTHDC1Q96MU7 727 aaKnown RBP27.35■■□□□ 1.97
MCTP1-218ENST00000515393 PPARGC1BQ86YN6 1023 aaKnown RBP27.1■■□□□ 1.93
MCTP1-218ENST00000515393 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
MCTP1-218ENST00000515393 DAXXQ9UER7 740 aaPredicted RBP26.87■■□□□ 1.89
MCTP1-218ENST00000515393 HNRNPUL2Q1KMD3 747 aaKnown RBP26.84■■□□□ 1.89
MCTP1-218ENST00000515393 DIEXFQ68CQ4 756 aaKnown RBP26.81■■□□□ 1.88
MCTP1-218ENST00000515393 ITGAEP38570 1179 aa26.77■■□□□ 1.88
MCTP1-218ENST00000515393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.85
MCTP1-218ENST00000515393 POLR3GLQ9BT43 218 aa26.5■■□□□ 1.83
MCTP1-218ENST00000515393 RTL5Q5HYW3 569 aaPredicted RBP26.41■■□□□ 1.82
MCTP1-218ENST00000515393 MYT1LQ9UL68 1186 aa26.4■■□□□ 1.82
MCTP1-218ENST00000515393 FAM50AQ14320 339 aaKnown RBP26.36■■□□□ 1.81
MCTP1-218ENST00000515393 ZNF316A6NFI3 1004 aaPredicted RBP26.34■■□□□ 1.81
MCTP1-218ENST00000515393 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
MCTP1-218ENST00000515393 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
MCTP1-218ENST00000515393 ABCC9O60706 1549 aa26.29■■□□□ 1.8
MCTP1-218ENST00000515393 ANP32CO43423 234 aa26.29■■□□□ 1.8
MCTP1-218ENST00000515393 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
MCTP1-218ENST00000515393 TRIM52Q96A61 297 aa26.2■■□□□ 1.78
MCTP1-218ENST00000515393 GTF3C3Q9Y5Q9 886 aa26.19■■□□□ 1.78
MCTP1-218ENST00000515393 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
MCTP1-218ENST00000515393 CDK11AQ9UQ88 783 aaPredicted RBP26.12■■□□□ 1.77
MCTP1-218ENST00000515393 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
MCTP1-218ENST00000515393 NEUROD1Q13562 356 aa26.08■■□□□ 1.77
MCTP1-218ENST00000515393 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.76
MCTP1-218ENST00000515393 CNGB1Q14028 1251 aaPredicted RBP26■■□□□ 1.75
MCTP1-218ENST00000515393 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
MCTP1-218ENST00000515393 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
MCTP1-218ENST00000515393 BCANQ96GW7 911 aa25.78■■□□□ 1.72
MCTP1-218ENST00000515393 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
MCTP1-218ENST00000515393 ZBTB47Q9UFB7 747 aaPredicted RBP25.73■■□□□ 1.71
MCTP1-218ENST00000515393 ANP32AP39687 249 aaKnown RBP25.7■■□□□ 1.7
MCTP1-218ENST00000515393 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
MCTP1-218ENST00000515393 TONSLQ96HA7 1378 aa25.65■■□□□ 1.7
MCTP1-218ENST00000515393 EEA1Q15075 1411 aa25.64■■□□□ 1.69
MCTP1-218ENST00000515393 NEFMP07197 916 aa25.59■■□□□ 1.69
MCTP1-218ENST00000515393 CANXP27824 592 aaKnown RBP25.59■■□□□ 1.69
MCTP1-218ENST00000515393 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
MCTP1-218ENST00000515393 FBLN2P98095 1184 aa25.39■■□□□ 1.66
MCTP1-218ENST00000515393 FKBP8Q14318 412 aa25.39■■□□□ 1.66
MCTP1-218ENST00000515393 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
MCTP1-218ENST00000515393 CLIP1P30622 1438 aa25.36■■□□□ 1.65
MCTP1-218ENST00000515393 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
MCTP1-218ENST00000515393 HNRNPUQ00839 825 aaKnown RBP eCLIP25.31■■□□□ 1.64
MCTP1-218ENST00000515393 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
MCTP1-218ENST00000515393 UPF2Q9HAU5 1272 aaKnown RBP25.26■■□□□ 1.63
MCTP1-218ENST00000515393 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.26■■□□□ 1.63
MCTP1-218ENST00000515393 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
MCTP1-218ENST00000515393 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
MCTP1-218ENST00000515393 NACADO15069 1562 aa25.22■■□□□ 1.63
MCTP1-218ENST00000515393 ANP32BQ92688 251 aaKnown RBP25.21■■□□□ 1.63
MCTP1-218ENST00000515393 CEP162Q5TB80 1403 aa25.19■■□□□ 1.62
MCTP1-218ENST00000515393 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
MCTP1-218ENST00000515393 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
MCTP1-218ENST00000515393 TMC1Q8TDI8 760 aa25.12■■□□□ 1.61
MCTP1-218ENST00000515393 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
MCTP1-218ENST00000515393 NPM2Q86SE8 214 aaKnown RBP25.11■■□□□ 1.61
MCTP1-218ENST00000515393 ARID3CA6NKF2 412 aa25.11■■□□□ 1.61
MCTP1-218ENST00000515393 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
MCTP1-218ENST00000515393 CCDC136Q96JN2 1154 aa25.1■■□□□ 1.61
MCTP1-218ENST00000515393 FAM9BQ8IZU0 186 aa25.1■■□□□ 1.61
MCTP1-218ENST00000515393 EIF4G2P78344 907 aaKnown RBP eCLIP25.05■■□□□ 1.6
MCTP1-218ENST00000515393 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
MCTP1-218ENST00000515393 MRS2Q9HD23 443 aa25.04■■□□□ 1.6
MCTP1-218ENST00000515393 TSPY4P0CV99 314 aa25.03■■□□□ 1.6
MCTP1-218ENST00000515393 TSPY10P0CW01 314 aa25.03■■□□□ 1.6
MCTP1-218ENST00000515393 MIER1Q8N108 512 aa25.03■■□□□ 1.6
MCTP1-218ENST00000515393 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
MCTP1-218ENST00000515393 WDR43Q15061 677 aaKnown RBP eCLIP25■■□□□ 1.59
MCTP1-218ENST00000515393 HSP90AA1P07900 732 aaKnown RBP24.99■■□□□ 1.59
MCTP1-218ENST00000515393 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
MCTP1-218ENST00000515393 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
MCTP1-218ENST00000515393 DDRGK1Q96HY6 314 aa24.92■■□□□ 1.58
MCTP1-218ENST00000515393 ESF1Q9H501 851 aaKnown RBP24.91■■□□□ 1.58
MCTP1-218ENST00000515393 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
MCTP1-218ENST00000515393 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
MCTP1-218ENST00000515393 GLIPR1L2Q4G1C9 344 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms