RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
HOXC10-201ENST00000303460 CCDC180Q9P1Z9 1646 aa36.98■■■■□ 3.51
HOXC10-201ENST00000303460 ZCCHC6Q5VYS8 1495 aaKnown RBP35.61■■■■□ 3.29
HOXC10-201ENST00000303460 ABCC9O60706 1549 aa35.08■■■■□ 3.21
HOXC10-201ENST00000303460 DCAF8L2P0C7V8 631 aa35.03■■■■□ 3.2
HOXC10-201ENST00000303460 DCAF1Q9Y4B6 1507 aa35.02■■■■□ 3.2
HOXC10-201ENST00000303460 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
HOXC10-201ENST00000303460 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
HOXC10-201ENST00000303460 NACADO15069 1562 aa34.44■■■■□ 3.1
HOXC10-201ENST00000303460 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
HOXC10-201ENST00000303460 SCRIBQ14160 1630 aa34.05■■■■□ 3.04
HOXC10-201ENST00000303460 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
HOXC10-201ENST00000303460 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
HOXC10-201ENST00000303460 BICRAQ9NZM4 1560 aa33.21■■■□□ 2.91
HOXC10-201ENST00000303460 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
HOXC10-201ENST00000303460 CECR2Q9BXF3 1484 aa33■■■□□ 2.87
HOXC10-201ENST00000303460 RSF1Q96T23 1441 aaPredicted RBP32.88■■■□□ 2.85
HOXC10-201ENST00000303460 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
HOXC10-201ENST00000303460 BAZ1AQ9NRL2 1556 aaPredicted RBP32.72■■■□□ 2.83
HOXC10-201ENST00000303460 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
HOXC10-201ENST00000303460 WIZO95785 1651 aa32.52■■■□□ 2.8
HOXC10-201ENST00000303460 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
HOXC10-201ENST00000303460 EIF4G1Q04637 1599 aaKnown RBP32.18■■■□□ 2.74
HOXC10-201ENST00000303460 TOP2AP11388 1531 aaKnown RBP32.14■■■□□ 2.74
HOXC10-201ENST00000303460 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
HOXC10-201ENST00000303460 SMARCA2P51531 1590 aa32.03■■■□□ 2.72
HOXC10-201ENST00000303460 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
HOXC10-201ENST00000303460 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
HOXC10-201ENST00000303460 NCAPD3P42695 1498 aa31.8■■■□□ 2.68
HOXC10-201ENST00000303460 CHIC1Q5VXU3 224 aa31.77■■■□□ 2.68
HOXC10-201ENST00000303460 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
HOXC10-201ENST00000303460 CC2D2AQ9P2K1 1620 aa31.74■■■□□ 2.67
HOXC10-201ENST00000303460 TRIM41Q8WV44 630 aa31.2■■■□□ 2.58
HOXC10-201ENST00000303460 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
HOXC10-201ENST00000303460 CFTRP13569 1480 aa31.09■■■□□ 2.57
HOXC10-201ENST00000303460 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
HOXC10-201ENST00000303460 CADPSQ9ULU8 1353 aa30.98■■■□□ 2.55
HOXC10-201ENST00000303460 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
HOXC10-201ENST00000303460 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
HOXC10-201ENST00000303460 SYNJ1O43426 1573 aa30.85■■■□□ 2.53
HOXC10-201ENST00000303460 NESP48681 1621 aa30.8■■■□□ 2.52
HOXC10-201ENST00000303460 LAMC3Q9Y6N6 1575 aa30.72■■■□□ 2.51
HOXC10-201ENST00000303460 TOP2BQ02880 1626 aa30.7■■■□□ 2.5
HOXC10-201ENST00000303460 FAM9AQ8IZU1 332 aaPredicted RBP30.68■■■□□ 2.5
HOXC10-201ENST00000303460 BIVM-ERCC5R4GMW8 1640 aa30.67■■■□□ 2.5
HOXC10-201ENST00000303460 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
HOXC10-201ENST00000303460 CUX1P39880 1505 aa30.66■■■□□ 2.5
HOXC10-201ENST00000303460 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
HOXC10-201ENST00000303460 SOGA1O94964 1423 aa30.56■■■□□ 2.48
HOXC10-201ENST00000303460 RUSC2Q8N2Y8 1516 aa30.48■■■□□ 2.47
HOXC10-201ENST00000303460 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
HOXC10-201ENST00000303460 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
HOXC10-201ENST00000303460 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
HOXC10-201ENST00000303460 EEA1Q15075 1411 aa30.4■■■□□ 2.46
HOXC10-201ENST00000303460 DNMBPQ6XZF7 1577 aa30.36■■■□□ 2.45
HOXC10-201ENST00000303460 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
HOXC10-201ENST00000303460 FGD5Q6ZNL6 1462 aa30.32■■■□□ 2.44
HOXC10-201ENST00000303460 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
HOXC10-201ENST00000303460 CSRNP3Q8WYN3 585 aa30.28■■■□□ 2.44
HOXC10-201ENST00000303460 EHMT2Q96KQ7 1210 aa30.28■■■□□ 2.44
HOXC10-201ENST00000303460 POLA1P09884 1462 aaPredicted RBP30.18■■■□□ 2.42
HOXC10-201ENST00000303460 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
HOXC10-201ENST00000303460 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
HOXC10-201ENST00000303460 RAD54L2Q9Y4B4 1467 aa30.1■■■□□ 2.41
HOXC10-201ENST00000303460 CUX2O14529 1486 aa30.1■■■□□ 2.41
HOXC10-201ENST00000303460 KIF21BO75037 1637 aa30.06■■■□□ 2.4
HOXC10-201ENST00000303460 ERCC6Q03468 1493 aa30.03■■■□□ 2.4
HOXC10-201ENST00000303460 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
HOXC10-201ENST00000303460 GOLGA3Q08378 1498 aa30.02■■■□□ 2.4
HOXC10-201ENST00000303460 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
HOXC10-201ENST00000303460 WDR62O43379 1518 aa29.97■■■□□ 2.39
HOXC10-201ENST00000303460 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
HOXC10-201ENST00000303460 RAPGEF2Q9Y4G8 1499 aa29.94■■■□□ 2.38
HOXC10-201ENST00000303460 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
HOXC10-201ENST00000303460 TNIKQ9UKE5 1360 aa29.91■■■□□ 2.38
HOXC10-201ENST00000303460 IGF1RP08069 1367 aa29.9■■■□□ 2.38
HOXC10-201ENST00000303460 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
HOXC10-201ENST00000303460 UBTFP17480 764 aaKnown RBP29.88■■■□□ 2.37
HOXC10-201ENST00000303460 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
HOXC10-201ENST00000303460 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
HOXC10-201ENST00000303460 TDRD9Q8NDG6 1382 aaKnown RBP29.81■■■□□ 2.36
HOXC10-201ENST00000303460 CEP162Q5TB80 1403 aa29.77■■■□□ 2.36
HOXC10-201ENST00000303460 CARMIL1Q5VZK9 1371 aa29.73■■■□□ 2.35
HOXC10-201ENST00000303460 GAPVD1Q14C86 1478 aa29.73■■■□□ 2.35
HOXC10-201ENST00000303460 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
HOXC10-201ENST00000303460 CUL7Q14999 1698 aa29.66■■■□□ 2.34
HOXC10-201ENST00000303460 AQRO60306 1485 aaKnown RBP eCLIP29.63■■■□□ 2.33
HOXC10-201ENST00000303460 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
HOXC10-201ENST00000303460 PBRM1Q86U86 1689 aa29.59■■■□□ 2.33
HOXC10-201ENST00000303460 CLIP1P30622 1438 aa29.55■■■□□ 2.32
HOXC10-201ENST00000303460 EIF4G3O43432 1585 aaKnown RBP29.51■■■□□ 2.31
HOXC10-201ENST00000303460 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
HOXC10-201ENST00000303460 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
HOXC10-201ENST00000303460 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
HOXC10-201ENST00000303460 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
HOXC10-201ENST00000303460 CTTNBP2Q8WZ74 1663 aa29.34■■■□□ 2.29
HOXC10-201ENST00000303460 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
HOXC10-201ENST00000303460 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
HOXC10-201ENST00000303460 ARHGAP35Q9NRY4 1499 aa29.3■■■□□ 2.28
HOXC10-201ENST00000303460 PCGF6Q9BYE7 350 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms