RNA–Protein interactions for RNA: ENST00000330722.6

KRT6A-201, Transcript of keratin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT6A, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-201ENST00000330722 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
KRT6A-201ENST00000330722 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
KRT6A-201ENST00000330722 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
KRT6A-201ENST00000330722 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
KRT6A-201ENST00000330722 SUPT5HO00267 1087 aaKnown RBP32.18■■■□□ 2.74
KRT6A-201ENST00000330722 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
KRT6A-201ENST00000330722 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
KRT6A-201ENST00000330722 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
KRT6A-201ENST00000330722 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
KRT6A-201ENST00000330722 SCRIBQ14160 1630 aa30.86■■■□□ 2.53
KRT6A-201ENST00000330722 ABCC9O60706 1549 aa30.78■■■□□ 2.52
KRT6A-201ENST00000330722 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
KRT6A-201ENST00000330722 NACADO15069 1562 aa30.39■■■□□ 2.46
KRT6A-201ENST00000330722 LOC105371045A0A1W2PR82 267 aa30.37■■■□□ 2.45
KRT6A-201ENST00000330722 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
KRT6A-201ENST00000330722 CECR2Q9BXF3 1484 aa30.23■■■□□ 2.43
KRT6A-201ENST00000330722 PCGF6Q9BYE7 350 aa30.12■■■□□ 2.41
KRT6A-201ENST00000330722 MROH2BQ7Z745 1585 aa30.09■■■□□ 2.41
KRT6A-201ENST00000330722 HRCP23327 699 aa29.99■■■□□ 2.39
KRT6A-201ENST00000330722 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
KRT6A-201ENST00000330722 WIZO95785 1651 aa29.91■■■□□ 2.38
KRT6A-201ENST00000330722 FAM9AQ8IZU1 332 aaPredicted RBP29.77■■■□□ 2.36
KRT6A-201ENST00000330722 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
KRT6A-201ENST00000330722 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
KRT6A-201ENST00000330722 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
KRT6A-201ENST00000330722 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
KRT6A-201ENST00000330722 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
KRT6A-201ENST00000330722 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.31
KRT6A-201ENST00000330722 SMARCA4P51532 1647 aa29.45■■■□□ 2.3
KRT6A-201ENST00000330722 TOP2AP11388 1531 aaKnown RBP29.37■■■□□ 2.29
KRT6A-201ENST00000330722 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
KRT6A-201ENST00000330722 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
KRT6A-201ENST00000330722 SMARCA2P51531 1590 aa29.25■■■□□ 2.27
KRT6A-201ENST00000330722 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
KRT6A-201ENST00000330722 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
KRT6A-201ENST00000330722 SOGA1O94964 1423 aa28.92■■■□□ 2.22
KRT6A-201ENST00000330722 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
KRT6A-201ENST00000330722 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.2
KRT6A-201ENST00000330722 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
KRT6A-201ENST00000330722 ZEB1P37275 1124 aaPredicted RBP28.67■■■□□ 2.18
KRT6A-201ENST00000330722 WRNQ14191 1432 aaPredicted RBP eCLIP28.66■■■□□ 2.18
KRT6A-201ENST00000330722 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
KRT6A-201ENST00000330722 CEP162Q5TB80 1403 aa28.65■■■□□ 2.18
KRT6A-201ENST00000330722 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
KRT6A-201ENST00000330722 SYNJ1O43426 1573 aa28.59■■■□□ 2.17
KRT6A-201ENST00000330722 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
KRT6A-201ENST00000330722 EEA1Q15075 1411 aa28.57■■■□□ 2.16
KRT6A-201ENST00000330722 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
KRT6A-201ENST00000330722 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
KRT6A-201ENST00000330722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
KRT6A-201ENST00000330722 GOLGA3Q08378 1498 aa28.44■■■□□ 2.14
KRT6A-201ENST00000330722 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
KRT6A-201ENST00000330722 CCER1Q8TC90 406 aaPredicted RBP28.27■■■□□ 2.12
KRT6A-201ENST00000330722 KIF21BO75037 1637 aa28.26■■■□□ 2.11
KRT6A-201ENST00000330722 RAPGEF2Q9Y4G8 1499 aa28.2■■■□□ 2.1
KRT6A-201ENST00000330722 TOP2BQ02880 1626 aa28.19■■■□□ 2.1
KRT6A-201ENST00000330722 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
KRT6A-201ENST00000330722 CLIP1P30622 1438 aa28.13■■■□□ 2.09
KRT6A-201ENST00000330722 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
KRT6A-201ENST00000330722 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
KRT6A-201ENST00000330722 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
KRT6A-201ENST00000330722 CUX1P39880 1505 aa28■■■□□ 2.07
KRT6A-201ENST00000330722 VPS8Q8N3P4 1428 aa27.99■■■□□ 2.07
KRT6A-201ENST00000330722 CFTRP13569 1480 aa27.93■■■□□ 2.06
KRT6A-201ENST00000330722 PRXQ9BXM0 1461 aa27.9■■■□□ 2.06
KRT6A-201ENST00000330722 HNRNPUL2Q1KMD3 747 aaKnown RBP27.87■■■□□ 2.05
KRT6A-201ENST00000330722 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
KRT6A-201ENST00000330722 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
KRT6A-201ENST00000330722 APLP2Q06481 763 aa27.75■■■□□ 2.03
KRT6A-201ENST00000330722 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
KRT6A-201ENST00000330722 DIEXFQ68CQ4 756 aaKnown RBP27.64■■■□□ 2.02
KRT6A-201ENST00000330722 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
KRT6A-201ENST00000330722 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
KRT6A-201ENST00000330722 PRDM2Q13029 1718 aa27.62■■■□□ 2.01
KRT6A-201ENST00000330722 SCAF1Q9H7N4 1312 aaKnown RBP27.6■■■□□ 2.01
KRT6A-201ENST00000330722 CUX2O14529 1486 aa27.57■■■□□ 2
KRT6A-201ENST00000330722 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
KRT6A-201ENST00000330722 IGF1RP08069 1367 aa27.54■■■□□ 2
KRT6A-201ENST00000330722 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
KRT6A-201ENST00000330722 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
KRT6A-201ENST00000330722 ZNF316A6NFI3 1004 aaPredicted RBP27.47■■□□□ 1.99
KRT6A-201ENST00000330722 CARMIL1Q5VZK9 1371 aa27.38■■□□□ 1.97
KRT6A-201ENST00000330722 NEUROD1Q13562 356 aa27.38■■□□□ 1.97
KRT6A-201ENST00000330722 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
KRT6A-201ENST00000330722 RRBP1Q9P2E9 1410 aaKnown RBP27.33■■□□□ 1.96
KRT6A-201ENST00000330722 NESP48681 1621 aa27.32■■□□□ 1.96
KRT6A-201ENST00000330722 ACIN1Q9UKV3 1341 aaKnown RBP27.32■■□□□ 1.96
KRT6A-201ENST00000330722 DHX57Q6P158 1386 aaKnown RBP27.3■■□□□ 1.96
KRT6A-201ENST00000330722 RAD54L2Q9Y4B4 1467 aa27.29■■□□□ 1.96
KRT6A-201ENST00000330722 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
KRT6A-201ENST00000330722 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
KRT6A-201ENST00000330722 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.94
KRT6A-201ENST00000330722 P3H3Q8IVL6 736 aa27.19■■□□□ 1.94
KRT6A-201ENST00000330722 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
KRT6A-201ENST00000330722 ITGAEP38570 1179 aa27.19■■□□□ 1.94
KRT6A-201ENST00000330722 TIAM1Q13009 1591 aa27.16■■□□□ 1.94
KRT6A-201ENST00000330722 MIER1Q8N108 512 aa27.15■■□□□ 1.94
KRT6A-201ENST00000330722 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.93
KRT6A-201ENST00000330722 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
KRT6A-201ENST00000330722 CLSPNQ9HAW4 1339 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms