RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 NISCHQ9Y2I1 1504 aa43.75■■■■■ 4.59
CHTOP-207ENST00000614256 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
CHTOP-207ENST00000614256 ABCC9O60706 1549 aa36.79■■■■□ 3.48
CHTOP-207ENST00000614256 ZCCHC6Q5VYS8 1495 aaKnown RBP36.65■■■■□ 3.46
CHTOP-207ENST00000614256 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
CHTOP-207ENST00000614256 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
CHTOP-207ENST00000614256 MYO15BQ96JP2 1530 aa35.92■■■■□ 3.34
CHTOP-207ENST00000614256 NACADO15069 1562 aa35.87■■■■□ 3.33
CHTOP-207ENST00000614256 RB1CC1Q8TDY2 1594 aa35.71■■■■□ 3.31
CHTOP-207ENST00000614256 SHROOM4Q9ULL8 1493 aa35.28■■■■□ 3.24
CHTOP-207ENST00000614256 SCRIBQ14160 1630 aa35.27■■■■□ 3.24
CHTOP-207ENST00000614256 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
CHTOP-207ENST00000614256 BICRAQ9NZM4 1560 aa34.71■■■■□ 3.15
CHTOP-207ENST00000614256 PABPN1Q86U42 306 aaKnown RBP eCLIP34.55■■■■□ 3.12
CHTOP-207ENST00000614256 CECR2Q9BXF3 1484 aa34.06■■■■□ 3.04
CHTOP-207ENST00000614256 BAZ1AQ9NRL2 1556 aaPredicted RBP33.81■■■■□ 3
CHTOP-207ENST00000614256 MROH2BQ7Z745 1585 aa33.8■■■■□ 3
CHTOP-207ENST00000614256 SMARCA4P51532 1647 aa33.78■■■■□ 3
CHTOP-207ENST00000614256 RSF1Q96T23 1441 aaPredicted RBP33.71■■■□□ 2.99
CHTOP-207ENST00000614256 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
CHTOP-207ENST00000614256 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
CHTOP-207ENST00000614256 WIZO95785 1651 aa33.53■■■□□ 2.96
CHTOP-207ENST00000614256 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
CHTOP-207ENST00000614256 CC2D2AQ9P2K1 1620 aa33.32■■■□□ 2.92
CHTOP-207ENST00000614256 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
CHTOP-207ENST00000614256 SMARCA2P51531 1590 aa33.27■■■□□ 2.92
CHTOP-207ENST00000614256 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
CHTOP-207ENST00000614256 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
CHTOP-207ENST00000614256 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
CHTOP-207ENST00000614256 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
CHTOP-207ENST00000614256 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.86
CHTOP-207ENST00000614256 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.84
CHTOP-207ENST00000614256 CFTRP13569 1480 aa32.22■■■□□ 2.75
CHTOP-207ENST00000614256 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.74
CHTOP-207ENST00000614256 NESP48681 1621 aa32.17■■■□□ 2.74
CHTOP-207ENST00000614256 PRDM2Q13029 1718 aa32.15■■■□□ 2.74
CHTOP-207ENST00000614256 LAMC3Q9Y6N6 1575 aa32.09■■■□□ 2.73
CHTOP-207ENST00000614256 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
CHTOP-207ENST00000614256 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
CHTOP-207ENST00000614256 FANCD2Q9BXW9 1451 aa31.86■■■□□ 2.69
CHTOP-207ENST00000614256 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
CHTOP-207ENST00000614256 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
CHTOP-207ENST00000614256 WRNQ14191 1432 aaPredicted RBP eCLIP31.73■■■□□ 2.675e-6■■□□□ 12.5
CHTOP-207ENST00000614256 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
CHTOP-207ENST00000614256 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
CHTOP-207ENST00000614256 CUX1P39880 1505 aa31.64■■■□□ 2.66
CHTOP-207ENST00000614256 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
CHTOP-207ENST00000614256 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
CHTOP-207ENST00000614256 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
CHTOP-207ENST00000614256 ERCC6Q03468 1493 aa31.55■■■□□ 2.64
CHTOP-207ENST00000614256 URB2Q14146 1524 aaKnown RBP31.54■■■□□ 2.64
CHTOP-207ENST00000614256 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
CHTOP-207ENST00000614256 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
CHTOP-207ENST00000614256 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
CHTOP-207ENST00000614256 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
CHTOP-207ENST00000614256 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
CHTOP-207ENST00000614256 WDR62O43379 1518 aa31.35■■■□□ 2.61
CHTOP-207ENST00000614256 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
CHTOP-207ENST00000614256 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
CHTOP-207ENST00000614256 SOGA1O94964 1423 aa31.18■■■□□ 2.58
CHTOP-207ENST00000614256 RUSC2Q8N2Y8 1516 aa31.14■■■□□ 2.58
CHTOP-207ENST00000614256 CUX2O14529 1486 aa31.14■■■□□ 2.58
CHTOP-207ENST00000614256 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
CHTOP-207ENST00000614256 TARBP1Q13395 1621 aaKnown RBP31.1■■■□□ 2.57
CHTOP-207ENST00000614256 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
CHTOP-207ENST00000614256 ABCA10Q8WWZ4 1543 aa31.06■■■□□ 2.56
CHTOP-207ENST00000614256 IFT140Q96RY7 1462 aa30.97■■■□□ 2.55
CHTOP-207ENST00000614256 EEA1Q15075 1411 aa30.94■■■□□ 2.54
CHTOP-207ENST00000614256 KIF27Q86VH2 1401 aa30.94■■■□□ 2.54
CHTOP-207ENST00000614256 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
CHTOP-207ENST00000614256 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
CHTOP-207ENST00000614256 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
CHTOP-207ENST00000614256 CSRNP3Q8WYN3 585 aa30.83■■■□□ 2.53
CHTOP-207ENST00000614256 AQRO60306 1485 aaKnown RBP eCLIP30.81■■■□□ 2.525e-9■■■■■ 42.9
CHTOP-207ENST00000614256 GAPVD1Q14C86 1478 aa30.8■■■□□ 2.52
CHTOP-207ENST00000614256 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
CHTOP-207ENST00000614256 PBRM1Q86U86 1689 aa30.77■■■□□ 2.52
CHTOP-207ENST00000614256 IGF1RP08069 1367 aa30.75■■■□□ 2.51
CHTOP-207ENST00000614256 LOC105371045A0A1W2PR82 267 aa30.69■■■□□ 2.5
CHTOP-207ENST00000614256 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
CHTOP-207ENST00000614256 KIF21BO75037 1637 aa30.66■■■□□ 2.5
CHTOP-207ENST00000614256 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
CHTOP-207ENST00000614256 PRXQ9BXM0 1461 aa30.65■■■□□ 2.5
CHTOP-207ENST00000614256 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
CHTOP-207ENST00000614256 CUL7Q14999 1698 aa30.62■■■□□ 2.49
CHTOP-207ENST00000614256 RAPGEF2Q9Y4G8 1499 aa30.58■■■□□ 2.49
CHTOP-207ENST00000614256 CARMIL1Q5VZK9 1371 aa30.56■■■□□ 2.48
CHTOP-207ENST00000614256 ADAMTS12P58397 1594 aa30.53■■■□□ 2.48
CHTOP-207ENST00000614256 GOLGA3Q08378 1498 aa30.53■■■□□ 2.48
CHTOP-207ENST00000614256 SNAPC4Q5SXM2 1469 aa30.52■■■□□ 2.48
CHTOP-207ENST00000614256 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
CHTOP-207ENST00000614256 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
CHTOP-207ENST00000614256 UBTFP17480 764 aaKnown RBP30.37■■■□□ 2.45
CHTOP-207ENST00000614256 SYNJ2O15056 1496 aa30.33■■■□□ 2.45
CHTOP-207ENST00000614256 TNIKQ9UKE5 1360 aa30.31■■■□□ 2.44
CHTOP-207ENST00000614256 GRIN2AQ12879 1464 aa30.28■■■□□ 2.44
CHTOP-207ENST00000614256 CHD1O14646 1710 aa30.28■■■□□ 2.44
CHTOP-207ENST00000614256 CTTNBP2Q8WZ74 1663 aa30.25■■■□□ 2.43
CHTOP-207ENST00000614256 CHMP7Q8WUX9 453 aaPredicted RBP30.22■■■□□ 2.43
CHTOP-207ENST00000614256 FBLN2P98095 1184 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms