RNA–Protein interactions for RNA: ENST00000398158.5

CBS-203, Transcript of cystathionine-beta-synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBS, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBS-203ENST00000398158 NISCHQ9Y2I1 1504 aa39.01■■■■□ 3.84
CBS-203ENST00000398158 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
CBS-203ENST00000398158 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
CBS-203ENST00000398158 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
CBS-203ENST00000398158 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
CBS-203ENST00000398158 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
CBS-203ENST00000398158 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
CBS-203ENST00000398158 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.6
CBS-203ENST00000398158 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
CBS-203ENST00000398158 MYO15BQ96JP2 1530 aa31.16■■■□□ 2.58
CBS-203ENST00000398158 ABCC9O60706 1549 aa31.06■■■□□ 2.56
CBS-203ENST00000398158 NACADO15069 1562 aa30.82■■■□□ 2.52
CBS-203ENST00000398158 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
CBS-203ENST00000398158 CECR2Q9BXF3 1484 aa30.47■■■□□ 2.47
CBS-203ENST00000398158 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
CBS-203ENST00000398158 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
CBS-203ENST00000398158 LOC105371045A0A1W2PR82 267 aa30.34■■■□□ 2.45
CBS-203ENST00000398158 WIZO95785 1651 aa30.18■■■□□ 2.42
CBS-203ENST00000398158 TRIM41Q8WV44 630 aa30.04■■■□□ 2.4
CBS-203ENST00000398158 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
CBS-203ENST00000398158 PCGF6Q9BYE7 350 aa30■■■□□ 2.39
CBS-203ENST00000398158 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
CBS-203ENST00000398158 HRCP23327 699 aa29.82■■■□□ 2.36
CBS-203ENST00000398158 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
CBS-203ENST00000398158 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
CBS-203ENST00000398158 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
CBS-203ENST00000398158 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
CBS-203ENST00000398158 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
CBS-203ENST00000398158 BICRAQ9NZM4 1560 aa29.63■■■□□ 2.33
CBS-203ENST00000398158 EHMT2Q96KQ7 1210 aa29.58■■■□□ 2.33
CBS-203ENST00000398158 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
CBS-203ENST00000398158 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
CBS-203ENST00000398158 TRIM26Q12899 539 aaPredicted RBP29.47■■■□□ 2.31
CBS-203ENST00000398158 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
CBS-203ENST00000398158 PPARGC1BQ86YN6 1023 aaKnown RBP29.31■■■□□ 2.28
CBS-203ENST00000398158 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
CBS-203ENST00000398158 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
CBS-203ENST00000398158 SOGA1O94964 1423 aa29.05■■■□□ 2.24
CBS-203ENST00000398158 RUSC2Q8N2Y8 1516 aa28.95■■■□□ 2.23
CBS-203ENST00000398158 BAZ1BQ9UIG0 1483 aaKnown RBP28.95■■■□□ 2.22
CBS-203ENST00000398158 WRNQ14191 1432 aaPredicted RBP eCLIP28.89■■■□□ 2.21
CBS-203ENST00000398158 SYNJ1O43426 1573 aa28.82■■■□□ 2.2
CBS-203ENST00000398158 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
CBS-203ENST00000398158 EEA1Q15075 1411 aa28.79■■■□□ 2.2
CBS-203ENST00000398158 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
CBS-203ENST00000398158 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
CBS-203ENST00000398158 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
CBS-203ENST00000398158 ZEB1P37275 1124 aaPredicted RBP28.65■■■□□ 2.18
CBS-203ENST00000398158 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
CBS-203ENST00000398158 TTBK1Q5TCY1 1321 aaPredicted RBP28.55■■■□□ 2.16
CBS-203ENST00000398158 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
CBS-203ENST00000398158 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
CBS-203ENST00000398158 KIF21BO75037 1637 aa28.48■■■□□ 2.15
CBS-203ENST00000398158 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
CBS-203ENST00000398158 TOP2BQ02880 1626 aa28.46■■■□□ 2.15
CBS-203ENST00000398158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.39■■■□□ 2.14
CBS-203ENST00000398158 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
CBS-203ENST00000398158 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
CBS-203ENST00000398158 CLIP1P30622 1438 aa28.28■■■□□ 2.12
CBS-203ENST00000398158 CUX1P39880 1505 aa28.26■■■□□ 2.11
CBS-203ENST00000398158 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
CBS-203ENST00000398158 CFTRP13569 1480 aa28.23■■■□□ 2.11
CBS-203ENST00000398158 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
CBS-203ENST00000398158 VPS8Q8N3P4 1428 aa28.13■■■□□ 2.09
CBS-203ENST00000398158 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
CBS-203ENST00000398158 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
CBS-203ENST00000398158 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
CBS-203ENST00000398158 KIF27Q86VH2 1401 aa28■■■□□ 2.07
CBS-203ENST00000398158 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
CBS-203ENST00000398158 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
CBS-203ENST00000398158 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
CBS-203ENST00000398158 APLP2Q06481 763 aa27.9■■■□□ 2.06
CBS-203ENST00000398158 HNRNPUL2Q1KMD3 747 aaKnown RBP27.89■■■□□ 2.05
CBS-203ENST00000398158 CUX2O14529 1486 aa27.81■■■□□ 2.04
CBS-203ENST00000398158 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
CBS-203ENST00000398158 IGF1RP08069 1367 aa27.75■■■□□ 2.03
CBS-203ENST00000398158 KANK4Q5T7N3 995 aaPredicted RBP27.7■■■□□ 2.03
CBS-203ENST00000398158 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.02
CBS-203ENST00000398158 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
CBS-203ENST00000398158 NESP48681 1621 aa27.63■■■□□ 2.01
CBS-203ENST00000398158 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
CBS-203ENST00000398158 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
CBS-203ENST00000398158 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
CBS-203ENST00000398158 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
CBS-203ENST00000398158 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
CBS-203ENST00000398158 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
CBS-203ENST00000398158 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
CBS-203ENST00000398158 ABCA10Q8WWZ4 1543 aa27.43■■□□□ 1.98
CBS-203ENST00000398158 ZNF316A6NFI3 1004 aaPredicted RBP27.43■■□□□ 1.98
CBS-203ENST00000398158 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.97
CBS-203ENST00000398158 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
CBS-203ENST00000398158 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
CBS-203ENST00000398158 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
CBS-203ENST00000398158 LAMC3Q9Y6N6 1575 aa27.34■■□□□ 1.97
CBS-203ENST00000398158 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
CBS-203ENST00000398158 DHX57Q6P158 1386 aaKnown RBP27.33■■□□□ 1.97
CBS-203ENST00000398158 CCNB3Q8WWL7 1395 aa27.32■■□□□ 1.96
CBS-203ENST00000398158 MAP3K1Q13233 1512 aa27.27■■□□□ 1.96
CBS-203ENST00000398158 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
CBS-203ENST00000398158 PCF11O94913 1555 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms