RNA–Protein interactions for RNA: ENST00000528266.5

CCDC17-209, Transcript of coiled-coil domain containing 17, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC17, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-209ENST00000528266 NISCHQ9Y2I1 1504 aa39.97■■■■□ 3.99
CCDC17-209ENST00000528266 CCDC180Q9P1Z9 1646 aa34.76■■■■□ 3.16
CCDC17-209ENST00000528266 ZCCHC6Q5VYS8 1495 aaKnown RBP33.58■■■□□ 2.97
CCDC17-209ENST00000528266 SHROOM4Q9ULL8 1493 aa33.14■■■□□ 2.9
CCDC17-209ENST00000528266 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
CCDC17-209ENST00000528266 DCAF1Q9Y4B6 1507 aa33■■■□□ 2.87
CCDC17-209ENST00000528266 ABCC9O60706 1549 aa32.9■■■□□ 2.86
CCDC17-209ENST00000528266 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
CCDC17-209ENST00000528266 NACADO15069 1562 aa32.37■■■□□ 2.77
CCDC17-209ENST00000528266 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
CCDC17-209ENST00000528266 RB1CC1Q8TDY2 1594 aa32.08■■■□□ 2.73
CCDC17-209ENST00000528266 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
CCDC17-209ENST00000528266 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
CCDC17-209ENST00000528266 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
CCDC17-209ENST00000528266 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
CCDC17-209ENST00000528266 CECR2Q9BXF3 1484 aa31.11■■■□□ 2.57
CCDC17-209ENST00000528266 PABPN1Q86U42 306 aaKnown RBP eCLIP31.09■■■□□ 2.57
CCDC17-209ENST00000528266 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.56
CCDC17-209ENST00000528266 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
CCDC17-209ENST00000528266 BAZ1AQ9NRL2 1556 aaPredicted RBP30.84■■■□□ 2.53
CCDC17-209ENST00000528266 SMARCA4P51532 1647 aa30.71■■■□□ 2.51
CCDC17-209ENST00000528266 WIZO95785 1651 aa30.69■■■□□ 2.5
CCDC17-209ENST00000528266 HRCP23327 699 aa30.39■■■□□ 2.46
CCDC17-209ENST00000528266 PEG3Q9GZU2 1588 aa30.3■■■□□ 2.44
CCDC17-209ENST00000528266 LOC105371045A0A1W2PR82 267 aa30.3■■■□□ 2.44
CCDC17-209ENST00000528266 TOP2AP11388 1531 aaKnown RBP30.3■■■□□ 2.44
CCDC17-209ENST00000528266 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
CCDC17-209ENST00000528266 EIF4G1Q04637 1599 aaKnown RBP30.21■■■□□ 2.43
CCDC17-209ENST00000528266 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.42
CCDC17-209ENST00000528266 SMARCA2P51531 1590 aa30.14■■■□□ 2.42
CCDC17-209ENST00000528266 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
CCDC17-209ENST00000528266 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
CCDC17-209ENST00000528266 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
CCDC17-209ENST00000528266 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
CCDC17-209ENST00000528266 FAM9AQ8IZU1 332 aaPredicted RBP29.85■■■□□ 2.37
CCDC17-209ENST00000528266 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
CCDC17-209ENST00000528266 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
CCDC17-209ENST00000528266 TRIM26Q12899 539 aaPredicted RBP29.63■■■□□ 2.33
CCDC17-209ENST00000528266 ABCC8Q09428 1581 aa29.57■■■□□ 2.32
CCDC17-209ENST00000528266 EHMT2Q96KQ7 1210 aa29.52■■■□□ 2.32
CCDC17-209ENST00000528266 PPARGC1BQ86YN6 1023 aaKnown RBP29.49■■■□□ 2.31
CCDC17-209ENST00000528266 CFTRP13569 1480 aa29.27■■■□□ 2.28
CCDC17-209ENST00000528266 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
CCDC17-209ENST00000528266 ZEB1P37275 1124 aaPredicted RBP29.23■■■□□ 2.27
CCDC17-209ENST00000528266 SOGA1O94964 1423 aa29.2■■■□□ 2.26
CCDC17-209ENST00000528266 CADPSQ9ULU8 1353 aa29.16■■■□□ 2.26
CCDC17-209ENST00000528266 EEA1Q15075 1411 aa29.12■■■□□ 2.25
CCDC17-209ENST00000528266 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CCDC17-209ENST00000528266 SYNJ1O43426 1573 aa29.11■■■□□ 2.25
CCDC17-209ENST00000528266 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
CCDC17-209ENST00000528266 RUSC2Q8N2Y8 1516 aa29.07■■■□□ 2.24
CCDC17-209ENST00000528266 CSRNP3Q8WYN3 585 aa29.03■■■□□ 2.24
CCDC17-209ENST00000528266 TOP2BQ02880 1626 aa28.97■■■□□ 2.23
CCDC17-209ENST00000528266 TNIKQ9UKE5 1360 aa28.95■■■□□ 2.22
CCDC17-209ENST00000528266 BIVM-ERCC5R4GMW8 1640 aa28.93■■■□□ 2.22
CCDC17-209ENST00000528266 NESP48681 1621 aa28.92■■■□□ 2.22
CCDC17-209ENST00000528266 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
CCDC17-209ENST00000528266 CUX1P39880 1505 aa28.89■■■□□ 2.21
CCDC17-209ENST00000528266 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
CCDC17-209ENST00000528266 GOLGA3Q08378 1498 aa28.85■■■□□ 2.21
CCDC17-209ENST00000528266 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
CCDC17-209ENST00000528266 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
CCDC17-209ENST00000528266 KIF21BO75037 1637 aa28.74■■■□□ 2.19
CCDC17-209ENST00000528266 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
CCDC17-209ENST00000528266 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
CCDC17-209ENST00000528266 DNMBPQ6XZF7 1577 aa28.57■■■□□ 2.16
CCDC17-209ENST00000528266 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
CCDC17-209ENST00000528266 KIF21AQ7Z4S6 1674 aa28.55■■■□□ 2.16
CCDC17-209ENST00000528266 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
CCDC17-209ENST00000528266 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
CCDC17-209ENST00000528266 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
CCDC17-209ENST00000528266 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
CCDC17-209ENST00000528266 CLIP1P30622 1438 aa28.47■■■□□ 2.15
CCDC17-209ENST00000528266 KIF27Q86VH2 1401 aa28.47■■■□□ 2.15
CCDC17-209ENST00000528266 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
CCDC17-209ENST00000528266 CUX2O14529 1486 aa28.4■■■□□ 2.14
CCDC17-209ENST00000528266 PRXQ9BXM0 1461 aa28.36■■■□□ 2.13
CCDC17-209ENST00000528266 ERICH3Q5RHP9 1530 aa28.35■■■□□ 2.13
CCDC17-209ENST00000528266 RAD54L2Q9Y4B4 1467 aa28.35■■■□□ 2.13
CCDC17-209ENST00000528266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
CCDC17-209ENST00000528266 VPS8Q8N3P4 1428 aa28.32■■■□□ 2.12
CCDC17-209ENST00000528266 ABCA10Q8WWZ4 1543 aa28.29■■■□□ 2.12
CCDC17-209ENST00000528266 CCER1Q8TC90 406 aaPredicted RBP28.27■■■□□ 2.12
CCDC17-209ENST00000528266 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
CCDC17-209ENST00000528266 IGF1RP08069 1367 aa28.24■■■□□ 2.11
CCDC17-209ENST00000528266 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
CCDC17-209ENST00000528266 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
CCDC17-209ENST00000528266 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
CCDC17-209ENST00000528266 APLP2Q06481 763 aa28.13■■■□□ 2.09
CCDC17-209ENST00000528266 WDR62O43379 1518 aa28.11■■■□□ 2.09
CCDC17-209ENST00000528266 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
CCDC17-209ENST00000528266 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
CCDC17-209ENST00000528266 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
CCDC17-209ENST00000528266 TDRD9Q8NDG6 1382 aaKnown RBP28.08■■■□□ 2.08
CCDC17-209ENST00000528266 ARAP1Q96P48 1450 aa28.07■■■□□ 2.08
CCDC17-209ENST00000528266 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
CCDC17-209ENST00000528266 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
CCDC17-209ENST00000528266 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
CCDC17-209ENST00000528266 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
CCDC17-209ENST00000528266 CUL7Q14999 1698 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms